RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 SIRT5Q9NXA8 310 aa15.91■□□□□ 0.14
PRPF40A-204ENST00000450303 PLEKHB1Q9UF11 243 aaPredicted RBP15.91■□□□□ 0.14
PRPF40A-204ENST00000450303 SLC5A6Q9Y289 635 aa15.91■□□□□ 0.14
PRPF40A-204ENST00000450303 TCRBV16S1A1N1A0A5B0 115 aa15.9■□□□□ 0.14
PRPF40A-204ENST00000450303 PLPP1O14494 284 aa15.9■□□□□ 0.14
PRPF40A-204ENST00000450303 RASAL1O95294 804 aa15.9■□□□□ 0.14
PRPF40A-204ENST00000450303 CD96P40200 585 aa15.9■□□□□ 0.14
PRPF40A-204ENST00000450303 HNRNPFP52597 415 aaKnown RBP15.9■□□□□ 0.14
PRPF40A-204ENST00000450303 MTTPP55157 894 aa15.9■□□□□ 0.14
PRPF40A-204ENST00000450303 IRX1P78414 480 aaPredicted RBP15.9■□□□□ 0.14
PRPF40A-204ENST00000450303 PMP22Q01453 160 aa15.9■□□□□ 0.14
PRPF40A-204ENST00000450303 EMX2Q04743 252 aa15.9■□□□□ 0.14
PRPF40A-204ENST00000450303 TBL3Q12788 808 aaKnown RBP15.9■□□□□ 0.14
PRPF40A-204ENST00000450303 TUBA3CQ13748 450 aa15.9■□□□□ 0.14
PRPF40A-204ENST00000450303 LSM12Q3MHD2 195 aaKnown RBP15.9■□□□□ 0.14
PRPF40A-204ENST00000450303 ZNF766Q5HY98 468 aa15.9■□□□□ 0.14
PRPF40A-204ENST00000450303 OGFOD2Q6N063 350 aa15.9■□□□□ 0.14
PRPF40A-204ENST00000450303 TUBA3EQ6PEY2 450 aa15.9■□□□□ 0.14
PRPF40A-204ENST00000450303 CYP20A1Q6UW02 462 aa15.9■□□□□ 0.14
PRPF40A-204ENST00000450303 FAM9CQ8IZT9 166 aa15.9■□□□□ 0.14
PRPF40A-204ENST00000450303 FITM2Q8N6M3 262 aa15.9■□□□□ 0.14
PRPF40A-204ENST00000450303 C1orf52Q8N6N3 182 aaKnown RBP15.9■□□□□ 0.14
PRPF40A-204ENST00000450303 FAM47BQ8NA70 645 aa15.9■□□□□ 0.14
PRPF40A-204ENST00000450303 ELP5Q8TE02 316 aa15.9■□□□□ 0.14
PRPF40A-204ENST00000450303 ERP27Q96DN0 273 aa15.9■□□□□ 0.14
PRPF40A-204ENST00000450303 SERINC2Q96SA4 455 aa15.9■□□□□ 0.14
PRPF40A-204ENST00000450303 SLX1AQ9BQ83 275 aa15.9■□□□□ 0.14
PRPF40A-204ENST00000450303 EBF4Q9BQW3 602 aa15.9■□□□□ 0.14
PRPF40A-204ENST00000450303 HES7Q9BYE0 225 aa15.9■□□□□ 0.14
PRPF40A-204ENST00000450303 KLHL1Q9NR64 748 aa15.9■□□□□ 0.14
PRPF40A-204ENST00000450303 MRGBPQ9NV56 204 aa15.9■□□□□ 0.14
PRPF40A-204ENST00000450303 NOP53Q9NZM5 478 aaKnown RBP15.9■□□□□ 0.14
PRPF40A-204ENST00000450303 MCM8Q9UJA3 840 aa15.9■□□□□ 0.14
PRPF40A-204ENST00000450303 IGKV3D-11A0A0A0MRZ8 115 aa15.89■□□□□ 0.13
PRPF40A-204ENST00000450303 MYOCOSA0A1B0GUC4 107 aa15.89■□□□□ 0.13
PRPF40A-204ENST00000450303 GABRR3A8MPY1 467 aa15.89■□□□□ 0.13
PRPF40A-204ENST00000450303 UBDO15205 165 aa15.89■□□□□ 0.13
PRPF40A-204ENST00000450303 B3GALT2O43825 422 aa15.89■□□□□ 0.13
PRPF40A-204ENST00000450303 GUCY1B2O75343 617 aa15.89■□□□□ 0.13
PRPF40A-204ENST00000450303 DDAH2O95865 285 aa15.89■□□□□ 0.13
PRPF40A-204ENST00000450303 LDLRP01130 860 aa15.89■□□□□ 0.13
PRPF40A-204ENST00000450303 PRPS2P11908 318 aa15.89■□□□□ 0.13
PRPF40A-204ENST00000450303 CERS1P27544 350 aa15.89■□□□□ 0.13
PRPF40A-204ENST00000450303 PPP2R1BP30154 601 aa15.89■□□□□ 0.13
PRPF40A-204ENST00000450303 GSTM5P46439 218 aa15.89■□□□□ 0.13
PRPF40A-204ENST00000450303 RAB38P57729 211 aa15.89■□□□□ 0.13
PRPF40A-204ENST00000450303 KCNK10P57789 538 aa15.89■□□□□ 0.13
PRPF40A-204ENST00000450303 TAS2R50P59544 299 aa15.89■□□□□ 0.13
PRPF40A-204ENST00000450303 NCALDP61601 193 aa15.89■□□□□ 0.13
PRPF40A-204ENST00000450303 CCNYL2Q5T2Q4 361 aa15.89■□□□□ 0.13
PRPF40A-204ENST00000450303 METTL21CQ5VZV1 264 aa15.89■□□□□ 0.13
PRPF40A-204ENST00000450303 ZNF324BQ6AW86 544 aaPredicted RBP15.89■□□□□ 0.13
PRPF40A-204ENST00000450303 SPINK14Q6IE38 97 aa15.89■□□□□ 0.13
PRPF40A-204ENST00000450303 COMMD6Q7Z4G1 85 aa15.89■□□□□ 0.13
PRPF40A-204ENST00000450303 RPS19BP1Q86WX3 136 aaKnown RBP15.89■□□□□ 0.13
PRPF40A-204ENST00000450303 ZCCHC7Q8N3Z6 543 aaKnown RBP15.89■□□□□ 0.13
PRPF40A-204ENST00000450303 SLC5A8Q8N695 610 aa15.89■□□□□ 0.13
PRPF40A-204ENST00000450303 NR4A3Q92570 626 aa15.89■□□□□ 0.13
PRPF40A-204ENST00000450303 C5orf34Q96MH7 638 aa15.89■□□□□ 0.13
PRPF40A-204ENST00000450303 OR52B2Q96RD2 323 aa15.89■□□□□ 0.13
PRPF40A-204ENST00000450303 UTP23Q9BRU9 249 aaKnown RBP15.89■□□□□ 0.13
PRPF40A-204ENST00000450303 NPLQ9BXD5 320 aaPredicted RBP15.89■□□□□ 0.13
PRPF40A-204ENST00000450303 MYLK2Q9H1R3 596 aa15.89■□□□□ 0.13
PRPF40A-204ENST00000450303 DDX31Q9H8H2 851 aaKnown RBP15.89■□□□□ 0.13
PRPF40A-204ENST00000450303 PRDM7Q9NQW5 492 aa15.89■□□□□ 0.13
PRPF40A-204ENST00000450303 PRTFDC1Q9NRG1 225 aa15.89■□□□□ 0.13
PRPF40A-204ENST00000450303 PNO1Q9NRX1 252 aaKnown RBP15.89■□□□□ 0.13
PRPF40A-204ENST00000450303 ABI3Q9P2A4 366 aa15.89■□□□□ 0.13
PRPF40A-204ENST00000450303 SPACA6W5XKT8 324 aa15.89■□□□□ 0.13
PRPF40A-204ENST00000450303 POLEQ07864 2286 aa15.88■□□□□ 0.13
PRPF40A-204ENST00000450303 GNG14A0A1W2PPG7 69 aa15.88■□□□□ 0.13
PRPF40A-204ENST00000450303 SAGE2PA6NJ88 616 aa15.88■□□□□ 0.13
PRPF40A-204ENST00000450303 TGFBR3LH3BV60 316 aa15.88■□□□□ 0.13
PRPF40A-204ENST00000450303 LRRTM2O43300 516 aa15.88■□□□□ 0.13
PRPF40A-204ENST00000450303 PCDH7O60245 1069 aa15.88■□□□□ 0.13
PRPF40A-204ENST00000450303 WISP2O76076 250 aa15.88■□□□□ 0.13
PRPF40A-204ENST00000450303 KLK1P06870 262 aa15.88■□□□□ 0.13
PRPF40A-204ENST00000450303 NQO1P15559 274 aaKnown RBP15.88■□□□□ 0.13
PRPF40A-204ENST00000450303 HIST1H1TP22492 207 aaPredicted RBP15.88■□□□□ 0.13
PRPF40A-204ENST00000450303 ATP5A1P25705 553 aaKnown RBP15.88■□□□□ 0.13
PRPF40A-204ENST00000450303 MST1P26927 711 aa15.88■□□□□ 0.13
PRPF40A-204ENST00000450303 TIA1P31483 386 aaKnown RBP eCLIP15.88■□□□□ 0.13
PRPF40A-204ENST00000450303 BSGP35613 385 aa15.88■□□□□ 0.13
PRPF40A-204ENST00000450303 TDGF1P3P51864 188 aa15.88■□□□□ 0.13
PRPF40A-204ENST00000450303 TRA2BP62995 288 aaKnown RBP15.88■□□□□ 0.13
PRPF40A-204ENST00000450303 OC90Q02509 493 aaPredicted RBP15.88■□□□□ 0.13
PRPF40A-204ENST00000450303 KIAA0040Q15053 153 aa15.88■□□□□ 0.13
PRPF40A-204ENST00000450303 RPS6KA2Q15349 733 aa15.88■□□□□ 0.13
PRPF40A-204ENST00000450303 OR1C1Q15619 314 aa15.88■□□□□ 0.13
PRPF40A-204ENST00000450303 GSTA3Q16772 222 aa15.88■□□□□ 0.13
PRPF40A-204ENST00000450303 RFTN2Q52LD8 501 aaPredicted RBP15.88■□□□□ 0.13
PRPF40A-204ENST00000450303 ZNF468Q5VIY5 522 aaPredicted RBP15.88■□□□□ 0.13
PRPF40A-204ENST00000450303 NOXRED1Q6NXP6 359 aa15.88■□□□□ 0.13
PRPF40A-204ENST00000450303 GALNT18Q6P9A2 607 aa15.88■□□□□ 0.13
PRPF40A-204ENST00000450303 UBE3DQ7Z6J8 389 aa15.88■□□□□ 0.13
PRPF40A-204ENST00000450303 CLNKQ7Z7G1 428 aa15.88■□□□□ 0.13
PRPF40A-204ENST00000450303 MDS2Q8NDY4 140 aa15.88■□□□□ 0.13
PRPF40A-204ENST00000450303 NFAM1Q8NET5 270 aaPredicted RBP15.88■□□□□ 0.13
PRPF40A-204ENST00000450303 CSF3RQ99062 836 aa15.88■□□□□ 0.13
PRPF40A-204ENST00000450303 LYARQ9NX58 379 aaKnown RBP15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms