RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 FAM198BQ6UWH4 519 aa18.05■□□□□ 0.48
RPS28-202ENST00000449223 FBXW8Q8N3Y1 598 aa18.05■□□□□ 0.48
RPS28-202ENST00000449223 OR9A2Q8NGT5 310 aa18.05■□□□□ 0.48
RPS28-202ENST00000449223 FAM120BQ96EK7 910 aaKnown RBP18.05■□□□□ 0.48
RPS28-202ENST00000449223 AURKBQ96GD4 344 aaPredicted RBP18.05■□□□□ 0.48
RPS28-202ENST00000449223 SPSB2Q99619 263 aa18.05■□□□□ 0.48
RPS28-202ENST00000449223 YIPF2Q9BWQ6 316 aa18.05■□□□□ 0.48
RPS28-202ENST00000449223 ALOXE3Q9BYJ1 711 aa18.05■□□□□ 0.48
RPS28-202ENST00000449223 VN1R1Q9GZP7 353 aa18.05■□□□□ 0.48
RPS28-202ENST00000449223 DLL3Q9NYJ7 618 aa18.05■□□□□ 0.48
RPS28-202ENST00000449223 PTGFRNQ9P2B2 879 aa18.05■□□□□ 0.48
RPS28-202ENST00000449223 L3MBTL1Q9Y468 752 aa18.05■□□□□ 0.48
RPS28-202ENST00000449223 SEC23IPQ9Y6Y8 1000 aaKnown RBP18.05■□□□□ 0.48
RPS28-202ENST00000449223 RNF103-CHMP3A0A140T963 221 aa18.04■□□□□ 0.48
RPS28-202ENST00000449223 EVPLLA8MZ36 301 aa18.04■□□□□ 0.48
RPS28-202ENST00000449223 ANKRD65E5RJM6 399 aa18.04■□□□□ 0.48
RPS28-202ENST00000449223 PLOD3O60568 738 aa18.04■□□□□ 0.48
RPS28-202ENST00000449223 MAOAP21397 527 aa18.04■□□□□ 0.48
RPS28-202ENST00000449223 GPC1P35052 558 aa18.04■□□□□ 0.48
RPS28-202ENST00000449223 ID2Q02363 134 aa18.04■□□□□ 0.48
RPS28-202ENST00000449223 MGAT2Q10469 447 aa18.04■□□□□ 0.48
RPS28-202ENST00000449223 MAP4K2Q12851 820 aa18.04■□□□□ 0.48
RPS28-202ENST00000449223 FADDQ13158 208 aa18.04■□□□□ 0.48
RPS28-202ENST00000449223 LCN10Q6JVE6 187 aa18.04■□□□□ 0.48
RPS28-202ENST00000449223 BHLHB9Q6PI77 547 aa18.04■□□□□ 0.48
RPS28-202ENST00000449223 SERPINA11Q86U17 422 aa18.04■□□□□ 0.48
RPS28-202ENST00000449223 CALHM3Q86XJ0 350 aa18.04■□□□□ 0.48
RPS28-202ENST00000449223 OR2L13Q8N349 312 aa18.04■□□□□ 0.48
RPS28-202ENST00000449223 PTCHD1Q96NR3 888 aa18.04■□□□□ 0.48
RPS28-202ENST00000449223 FAM117AQ9C073 453 aa18.04■□□□□ 0.48
RPS28-202ENST00000449223 POLR1BQ9H9Y6 1135 aa18.04■□□□□ 0.48
RPS28-202ENST00000449223 NECTIN3Q9NQS3 549 aa18.04■□□□□ 0.48
RPS28-202ENST00000449223 GPATCH2Q9NW75 528 aa18.04■□□□□ 0.48
RPS28-202ENST00000449223 ADA2Q9NZK5 511 aa18.04■□□□□ 0.48
RPS28-202ENST00000449223 SLC7A8Q9UHI5 535 aa18.04■□□□□ 0.48
RPS28-202ENST00000449223 SDK2Q58EX2 2172 aa18.04■□□□□ 0.48
RPS28-202ENST00000449223 CNOT3O75175 753 aaKnown RBP18.03■□□□□ 0.48
RPS28-202ENST00000449223 KRT75O95678 551 aa18.03■□□□□ 0.48
RPS28-202ENST00000449223 CD63P08962 238 aa18.03■□□□□ 0.48
RPS28-202ENST00000449223 CCT3P49368 545 aaKnown RBP18.03■□□□□ 0.48
RPS28-202ENST00000449223 PRR5P85299 388 aa18.03■□□□□ 0.48
RPS28-202ENST00000449223 FHL5Q5TD97 284 aa18.03■□□□□ 0.48
RPS28-202ENST00000449223 NET1Q7Z628 596 aaPredicted RBP18.03■□□□□ 0.48
RPS28-202ENST00000449223 OR56A1Q8NGH5 318 aa18.03■□□□□ 0.48
RPS28-202ENST00000449223 OR52N2Q8NGI0 321 aa18.03■□□□□ 0.48
RPS28-202ENST00000449223 CLPTM1LQ96KA5 538 aa18.03■□□□□ 0.48
RPS28-202ENST00000449223 ZNF578Q96N58 590 aaPredicted RBP18.03■□□□□ 0.48
RPS28-202ENST00000449223 THUMPD3Q9BV44 507 aaKnown RBP18.03■□□□□ 0.48
RPS28-202ENST00000449223 SPATA9Q9BWV2 254 aa18.03■□□□□ 0.48
RPS28-202ENST00000449223 TRIM8Q9BZR9 551 aa18.03■□□□□ 0.48
RPS28-202ENST00000449223 CHST8Q9H2A9 424 aa18.03■□□□□ 0.48
RPS28-202ENST00000449223 RAD21L1Q9H4I0 556 aa18.03■□□□□ 0.48
RPS28-202ENST00000449223 ALG2Q9H553 416 aa18.03■□□□□ 0.48
RPS28-202ENST00000449223 AKIRIN1Q9H9L7 192 aaPredicted RBP18.03■□□□□ 0.48
RPS28-202ENST00000449223 CXorf21Q9HAI6 301 aa18.03■□□□□ 0.48
RPS28-202ENST00000449223 MAT2BQ9NZL9 334 aa18.03■□□□□ 0.48
RPS28-202ENST00000449223 ZNF639Q9UID6 485 aa18.03■□□□□ 0.48
RPS28-202ENST00000449223 EMC8O43402 210 aa18.03■□□□□ 0.48
RPS28-202ENST00000449223 PSMG1O95456 288 aa18.03■□□□□ 0.48
RPS28-202ENST00000449223 BMP2P12643 396 aa18.03■□□□□ 0.48
RPS28-202ENST00000449223 ME2P23368 584 aa18.03■□□□□ 0.48
RPS28-202ENST00000449223 MC3RP41968 323 aa18.03■□□□□ 0.48
RPS28-202ENST00000449223 GZMMP51124 257 aa18.03■□□□□ 0.48
RPS28-202ENST00000449223 TXNL4AP83876 142 aaKnown RBP18.03■□□□□ 0.48
RPS28-202ENST00000449223 DMTNQ08495 405 aa18.03■□□□□ 0.48
RPS28-202ENST00000449223 RGNQ15493 299 aa18.03■□□□□ 0.48
RPS28-202ENST00000449223 LTB4RQ15722 352 aa18.03■□□□□ 0.48
RPS28-202ENST00000449223 RSPO4Q2I0M5 234 aaPredicted RBP18.03■□□□□ 0.48
RPS28-202ENST00000449223 MINDY4Q4G0A6 757 aa18.03■□□□□ 0.48
RPS28-202ENST00000449223 TMEM107Q6UX40 140 aa18.03■□□□□ 0.48
RPS28-202ENST00000449223 C6orf15Q6UXA7 325 aaPredicted RBP18.03■□□□□ 0.48
RPS28-202ENST00000449223 LAPTM4BQ86VI4 370 aa18.03■□□□□ 0.48
RPS28-202ENST00000449223 GALNT6Q8NCL4 622 aa18.03■□□□□ 0.48
RPS28-202ENST00000449223 RBM18Q96H35 190 aaKnown RBP18.03■□□□□ 0.48
RPS28-202ENST00000449223 ZNF583Q96ND8 569 aa18.03■□□□□ 0.48
RPS28-202ENST00000449223 SLC46A1Q96NT5 459 aa18.03■□□□□ 0.48
RPS28-202ENST00000449223 C3orf14Q9HBI5 128 aa18.03■□□□□ 0.48
RPS28-202ENST00000449223 FOXJ2Q9P0K8 574 aa18.03■□□□□ 0.48
RPS28-202ENST00000449223 SUCOQ9UBS9 1254 aaKnown RBP18.03■□□□□ 0.48
RPS28-202ENST00000449223 MKL2Q9ULH7 1088 aa18.03■□□□□ 0.48
RPS28-202ENST00000449223 SNX8Q9Y5X2 465 aa18.03■□□□□ 0.48
RPS28-202ENST00000449223 CCDC88CQ9P219 2028 aa18.02■□□□□ 0.48
RPS28-202ENST00000449223 OR2W5A6NFC9 320 aa18.02■□□□□ 0.47
RPS28-202ENST00000449223 IDSB3KWA1 339 aa18.02■□□□□ 0.47
RPS28-202ENST00000449223 IQCJ-SCHIP1C9J366 451 aaPredicted RBP18.02■□□□□ 0.47
RPS28-202ENST00000449223 C9J4A7 227 aa18.02■□□□□ 0.47
RPS28-202ENST00000449223 UPK1AO00322 258 aa18.02■□□□□ 0.47
RPS28-202ENST00000449223 OR10H2O60403 315 aa18.02■□□□□ 0.47
RPS28-202ENST00000449223 C1QCP02747 245 aa18.02■□□□□ 0.47
RPS28-202ENST00000449223 SOAT1P35610 550 aa18.02■□□□□ 0.47
RPS28-202ENST00000449223 GSK3BP49841 420 aa18.02■□□□□ 0.47
RPS28-202ENST00000449223 LIPEQ05469 1076 aa18.02■□□□□ 0.47
RPS28-202ENST00000449223 NCF4Q15080 339 aa18.02■□□□□ 0.47
RPS28-202ENST00000449223 PTRH1Q86Y79 214 aaKnown RBP18.02■□□□□ 0.47
RPS28-202ENST00000449223 HPS6Q86YV9 775 aa18.02■□□□□ 0.47
RPS28-202ENST00000449223 GALNT12Q8IXK2 581 aa18.02■□□□□ 0.47
RPS28-202ENST00000449223 ADCY4Q8NFM4 1077 aa18.02■□□□□ 0.47
RPS28-202ENST00000449223 OR7G2Q8NG99 324 aa18.02■□□□□ 0.47
RPS28-202ENST00000449223 OR5AK3PQ8NH89 298 aa18.02■□□□□ 0.47
RPS28-202ENST00000449223 MIPOL1Q8TD10 442 aa18.02■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms