RNA–Protein interactions for RNA: ENST00000448539.1

GTF3C3-206, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-206ENST00000448539 SLC29A4Q7RTT9 530 aa13.04□□□□□ -0.32
GTF3C3-206ENST00000448539 TICAM1Q8IUC6 712 aa13.04□□□□□ -0.32
GTF3C3-206ENST00000448539 TMEM156Q8N614 296 aa13.04□□□□□ -0.32
GTF3C3-206ENST00000448539 HORMAD2Q8N7B1 307 aa13.04□□□□□ -0.32
GTF3C3-206ENST00000448539 ZNF321PQ8N8H1 164 aa13.04□□□□□ -0.32
GTF3C3-206ENST00000448539 OR8K3Q8NH51 312 aa13.04□□□□□ -0.32
GTF3C3-206ENST00000448539 GFM2Q969S9 779 aaKnown RBP13.04□□□□□ -0.32
GTF3C3-206ENST00000448539 CNRIP1Q96F85 164 aaPredicted RBP13.04□□□□□ -0.32
GTF3C3-206ENST00000448539 FCRL1Q96LA6 429 aa13.04□□□□□ -0.32
GTF3C3-206ENST00000448539 NUF2Q9BZD4 464 aa13.04□□□□□ -0.32
GTF3C3-206ENST00000448539 LUZP4Q9P127 313 aa13.04□□□□□ -0.32
GTF3C3-206ENST00000448539 GIMAP2Q9UG22 337 aa13.04□□□□□ -0.32
GTF3C3-206ENST00000448539 ZNF223Q9UK11 482 aaPredicted RBP13.04□□□□□ -0.32
GTF3C3-206ENST00000448539 TNRC6AQ8NDV7 1962 aaKnown RBP13.03□□□□□ -0.32
GTF3C3-206ENST00000448539 TRAV17A0A0B4J275 112 aa13.03□□□□□ -0.32
GTF3C3-206ENST00000448539 OR6C76A6NM76 312 aa13.03□□□□□ -0.32
GTF3C3-206ENST00000448539 TRPC5OSA6NMA1 111 aa13.03□□□□□ -0.32
GTF3C3-206ENST00000448539 CDK2AP1O14519 115 aa13.03□□□□□ -0.32
GTF3C3-206ENST00000448539 HDAC3O15379 428 aa13.03□□□□□ -0.32
GTF3C3-206ENST00000448539 AKAP10O43572 662 aa13.03□□□□□ -0.32
GTF3C3-206ENST00000448539 SLC28A2O43868 658 aa13.03□□□□□ -0.32
GTF3C3-206ENST00000448539 LRATO95237 230 aa13.03□□□□□ -0.32
GTF3C3-206ENST00000448539 PRPS2P11908 318 aa13.03□□□□□ -0.32
GTF3C3-206ENST00000448539 TACR1P25103 407 aa13.03□□□□□ -0.32
GTF3C3-206ENST00000448539 HPCAL1P37235 193 aa13.03□□□□□ -0.32
GTF3C3-206ENST00000448539 RPL3P39023 403 aaKnown RBP13.03□□□□□ -0.32
GTF3C3-206ENST00000448539 HK2P52789 917 aa13.03□□□□□ -0.32
GTF3C3-206ENST00000448539 RNF4P78317 190 aa13.03□□□□□ -0.32
GTF3C3-206ENST00000448539 OCRLQ01968 901 aa13.03□□□□□ -0.32
GTF3C3-206ENST00000448539 PLEKHN1Q494U1 663 aaPredicted RBP13.03□□□□□ -0.32
GTF3C3-206ENST00000448539 IL23RQ5VWK5 629 aa13.03□□□□□ -0.32
GTF3C3-206ENST00000448539 FAM180BQ6P0A1 224 aa13.03□□□□□ -0.32
GTF3C3-206ENST00000448539 Q6ZS92 163 aa13.03□□□□□ -0.32
GTF3C3-206ENST00000448539 CCDC116Q8IYX3 515 aa13.03□□□□□ -0.32
GTF3C3-206ENST00000448539 FAM9CQ8IZT9 166 aa13.03□□□□□ -0.32
GTF3C3-206ENST00000448539 VWA5B2Q8N398 1253 aa13.03□□□□□ -0.32
GTF3C3-206ENST00000448539 LIX1Q8N485 282 aa13.03□□□□□ -0.32
GTF3C3-206ENST00000448539 CATSPER1Q8NEC5 780 aa13.03□□□□□ -0.32
GTF3C3-206ENST00000448539 OR7G1Q8NGA0 311 aa13.03□□□□□ -0.32
GTF3C3-206ENST00000448539 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.03□□□□□ -0.32
GTF3C3-206ENST00000448539 PPCDCQ96CD2 204 aa13.03□□□□□ -0.32
GTF3C3-206ENST00000448539 EGLN2Q96KS0 407 aa13.03□□□□□ -0.32
GTF3C3-206ENST00000448539 NPAS2Q99743 824 aa13.03□□□□□ -0.32
GTF3C3-206ENST00000448539 C1orf50Q9BV19 199 aa13.03□□□□□ -0.32
GTF3C3-206ENST00000448539 REEP4Q9H6H4 257 aa13.03□□□□□ -0.32
GTF3C3-206ENST00000448539 NOP53Q9NZM5 478 aaKnown RBP13.03□□□□□ -0.32
GTF3C3-206ENST00000448539 MYOTQ9UBF9 498 aa13.03□□□□□ -0.32
GTF3C3-206ENST00000448539 MARCOQ9UEW3 520 aaPredicted RBP13.03□□□□□ -0.32
GTF3C3-206ENST00000448539 BAIAP2L1Q9UHR4 511 aa13.03□□□□□ -0.32
GTF3C3-206ENST00000448539 YARS2Q9Y2Z4 477 aaKnown RBP13.03□□□□□ -0.32
GTF3C3-206ENST00000448539 CSAG2Q9Y5P2 127 aa13.03□□□□□ -0.32
GTF3C3-206ENST00000448539 COL6A6A6NMZ7 2263 aa13.02□□□□□ -0.32
GTF3C3-206ENST00000448539 HRKO00198 91 aa13.02□□□□□ -0.33
GTF3C3-206ENST00000448539 PRKNO60260 465 aaPredicted RBP13.02□□□□□ -0.33
GTF3C3-206ENST00000448539 MAN1A2O60476 641 aa13.02□□□□□ -0.33
GTF3C3-206ENST00000448539 ITGA10O75578 1167 aa13.02□□□□□ -0.33
GTF3C3-206ENST00000448539 IGKV3-11P04433 115 aa13.02□□□□□ -0.33
GTF3C3-206ENST00000448539 JUNP05412 331 aaKnown RBP13.02□□□□□ -0.33
GTF3C3-206ENST00000448539 SSTR4P31391 388 aa13.02□□□□□ -0.33
GTF3C3-206ENST00000448539 CYB561P49447 251 aa13.02□□□□□ -0.33
GTF3C3-206ENST00000448539 TNFSF10P50591 281 aa13.02□□□□□ -0.33
GTF3C3-206ENST00000448539 SSR4P51571 173 aa13.02□□□□□ -0.33
GTF3C3-206ENST00000448539 EMX2Q04743 252 aa13.02□□□□□ -0.33
GTF3C3-206ENST00000448539 TUBA3CQ13748 450 aa13.02□□□□□ -0.33
GTF3C3-206ENST00000448539 SMU1Q2TAY7 513 aa13.02□□□□□ -0.33
GTF3C3-206ENST00000448539 HLA-DQA1Q5Y7H0 255 aa13.02□□□□□ -0.33
GTF3C3-206ENST00000448539 TUBA3EQ6PEY2 450 aa13.02□□□□□ -0.33
GTF3C3-206ENST00000448539 R3HCC1LQ7Z5L2 792 aaKnown RBP13.02□□□□□ -0.33
GTF3C3-206ENST00000448539 ADCY4Q8NFM4 1077 aa13.02□□□□□ -0.33
GTF3C3-206ENST00000448539 CLHC1Q8NHS4 586 aa13.02□□□□□ -0.33
GTF3C3-206ENST00000448539 NUBPLQ8TB37 319 aa13.02□□□□□ -0.33
GTF3C3-206ENST00000448539 C5orf34Q96MH7 638 aa13.02□□□□□ -0.33
GTF3C3-206ENST00000448539 ZNF681Q96N22 645 aa13.02□□□□□ -0.33
GTF3C3-206ENST00000448539 GAL3ST4Q96RP7 486 aa13.02□□□□□ -0.33
GTF3C3-206ENST00000448539 AKTIPQ9H8T0 292 aa13.02□□□□□ -0.33
GTF3C3-206ENST00000448539 LIN28AQ9H9Z2 209 aaKnown RBP13.02□□□□□ -0.33
GTF3C3-206ENST00000448539 MEAF6Q9HAF1 191 aa13.02□□□□□ -0.33
GTF3C3-206ENST00000448539 ANKRD10Q9NXR5 420 aa13.02□□□□□ -0.33
GTF3C3-206ENST00000448539 TAS2R7Q9NYW3 318 aa13.02□□□□□ -0.33
GTF3C3-206ENST00000448539 SH3BP4Q9P0V3 963 aa13.02□□□□□ -0.33
GTF3C3-206ENST00000448539 LRFN1Q9P244 771 aa13.02□□□□□ -0.33
GTF3C3-206ENST00000448539 MAP10Q9P2G4 905 aa13.02□□□□□ -0.33
GTF3C3-206ENST00000448539 BCAP29Q9UHQ4 241 aa13.02□□□□□ -0.33
GTF3C3-206ENST00000448539 CFL2Q9Y281 166 aa13.02□□□□□ -0.33
GTF3C3-206ENST00000448539 DOCK10Q96BY6 2186 aa13.02□□□□□ -0.33
GTF3C3-206ENST00000448539 SETXQ7Z333 2677 aaKnown RBP13.01□□□□□ -0.33
GTF3C3-206ENST00000448539 WWP2O00308 870 aa13.01□□□□□ -0.33
GTF3C3-206ENST00000448539 ATP8B1O43520 1251 aa13.01□□□□□ -0.33
GTF3C3-206ENST00000448539 PRAMEF2O60811 474 aa13.01□□□□□ -0.33
GTF3C3-206ENST00000448539 BCAS2O75934 225 aaPredicted RBP13.01□□□□□ -0.33
GTF3C3-206ENST00000448539 OR2J2O76002 312 aa13.01□□□□□ -0.33
GTF3C3-206ENST00000448539 CT62P0C5K7 136 aa13.01□□□□□ -0.33
GTF3C3-206ENST00000448539 CD46P15529 392 aa13.01□□□□□ -0.33
GTF3C3-206ENST00000448539 LBPP18428 481 aa13.01□□□□□ -0.33
GTF3C3-206ENST00000448539 CD96P40200 585 aa13.01□□□□□ -0.33
GTF3C3-206ENST00000448539 ST13P50502 369 aaKnown RBP13.01□□□□□ -0.33
GTF3C3-206ENST00000448539 NCBP2P52298 156 aaKnown RBP eCLIP13.01□□□□□ -0.33
GTF3C3-206ENST00000448539 SLC37A1P57057 533 aa13.01□□□□□ -0.33
GTF3C3-206ENST00000448539 FUT7Q11130 342 aa13.01□□□□□ -0.33
GTF3C3-206ENST00000448539 MAP4K2Q12851 820 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms