RNA–Protein interactions for RNA: ENST00000448428.1

PRPF40A-203, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 5

Gene PRPF40A, Length 490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-203ENST00000448428 SLC29A4Q7RTT9 530 aa11.78□□□□□ -0.52
PRPF40A-203ENST00000448428 TRIM46Q7Z4K8 759 aa11.78□□□□□ -0.52
PRPF40A-203ENST00000448428 GALNT12Q8IXK2 581 aa11.78□□□□□ -0.52
PRPF40A-203ENST00000448428 ZNF615Q8N8J6 731 aa11.78□□□□□ -0.52
PRPF40A-203ENST00000448428 POGLUT1Q8NBL1 392 aa11.78□□□□□ -0.52
PRPF40A-203ENST00000448428 C16orf52Q8NHV5 167 aa11.78□□□□□ -0.52
PRPF40A-203ENST00000448428 C16orf78Q8WTQ4 265 aa11.78□□□□□ -0.52
PRPF40A-203ENST00000448428 RELTQ969Z4 430 aa11.78□□□□□ -0.52
PRPF40A-203ENST00000448428 FAM111AQ96PZ2 611 aa11.78□□□□□ -0.52
PRPF40A-203ENST00000448428 GAL3ST4Q96RP7 486 aa11.78□□□□□ -0.52
PRPF40A-203ENST00000448428 FAIM2Q9BWQ8 316 aa11.78□□□□□ -0.52
PRPF40A-203ENST00000448428 WWTR1Q9GZV5 400 aa11.78□□□□□ -0.52
PRPF40A-203ENST00000448428 SIRT5Q9NXA8 310 aa11.78□□□□□ -0.52
PRPF40A-203ENST00000448428 MID2Q9UJV3 735 aa11.78□□□□□ -0.52
PRPF40A-203ENST00000448428 PSME2Q9UL46 239 aa11.78□□□□□ -0.52
PRPF40A-203ENST00000448428 COL12A1Q99715 3063 aa11.78□□□□□ -0.52
PRPF40A-203ENST00000448428 NINQ8N4C6 2090 aa11.77□□□□□ -0.52
PRPF40A-203ENST00000448428 A0A1B0GUH1 482 aa11.77□□□□□ -0.53
PRPF40A-203ENST00000448428 C2orf92A0A1B0GVN3 265 aa11.77□□□□□ -0.53
PRPF40A-203ENST00000448428 PINLYPA6NC86 204 aa11.77□□□□□ -0.53
PRPF40A-203ENST00000448428 GOLGA6L10A6NI86 522 aa11.77□□□□□ -0.53
PRPF40A-203ENST00000448428 ZNHIT1O43257 154 aa11.77□□□□□ -0.53
PRPF40A-203ENST00000448428 IL3P08700 152 aa11.77□□□□□ -0.53
PRPF40A-203ENST00000448428 ANXA4P09525 319 aaPredicted RBP11.77□□□□□ -0.53
PRPF40A-203ENST00000448428 UROSP10746 265 aa11.77□□□□□ -0.53
PRPF40A-203ENST00000448428 GP1BBP13224 206 aa11.77□□□□□ -0.53
PRPF40A-203ENST00000448428 DRD2P14416 443 aa11.77□□□□□ -0.53
PRPF40A-203ENST00000448428 ZNF24P17028 368 aa11.77□□□□□ -0.53
PRPF40A-203ENST00000448428 CNR1P21554 472 aa11.77□□□□□ -0.53
PRPF40A-203ENST00000448428 TIA1P31483 386 aaKnown RBP eCLIP11.77□□□□□ -0.53
PRPF40A-203ENST00000448428 PTGER1P34995 402 aa11.77□□□□□ -0.53
PRPF40A-203ENST00000448428 SOX18P35713 384 aa11.77□□□□□ -0.53
PRPF40A-203ENST00000448428 MAP4K2Q12851 820 aa11.77□□□□□ -0.53
PRPF40A-203ENST00000448428 EBPQ15125 230 aaKnown RBP11.77□□□□□ -0.53
PRPF40A-203ENST00000448428 PRICKLE4Q2TBC4 344 aa11.77□□□□□ -0.53
PRPF40A-203ENST00000448428 ZNF791Q3KP31 576 aaPredicted RBP11.77□□□□□ -0.53
PRPF40A-203ENST00000448428 CLEC6AQ6EIG7 209 aa11.77□□□□□ -0.53
PRPF40A-203ENST00000448428 FAM111BQ6SJ93 734 aa11.77□□□□□ -0.53
PRPF40A-203ENST00000448428 FJX1Q86VR8 437 aa11.77□□□□□ -0.53
PRPF40A-203ENST00000448428 SLC15A4Q8N697 577 aa11.77□□□□□ -0.53
PRPF40A-203ENST00000448428 ZFP62Q8NB50 900 aaPredicted RBP11.77□□□□□ -0.53
PRPF40A-203ENST00000448428 GOLM1Q8NBJ4 401 aa11.77□□□□□ -0.53
PRPF40A-203ENST00000448428 ADCY4Q8NFM4 1077 aa11.77□□□□□ -0.53
PRPF40A-203ENST00000448428 OR2M7Q8NG81 312 aa11.77□□□□□ -0.53
PRPF40A-203ENST00000448428 SLC22A8Q8TCC7 542 aa11.77□□□□□ -0.53
PRPF40A-203ENST00000448428 TCP10LQ8TDR4 215 aa11.77□□□□□ -0.53
PRPF40A-203ENST00000448428 KLHL29Q96CT2 875 aa11.77□□□□□ -0.53
PRPF40A-203ENST00000448428 CNRIP1Q96F85 164 aaPredicted RBP11.77□□□□□ -0.53
PRPF40A-203ENST00000448428 SGCZQ96LD1 299 aa11.77□□□□□ -0.53
PRPF40A-203ENST00000448428 ZNF681Q96N22 645 aa11.77□□□□□ -0.53
PRPF40A-203ENST00000448428 SMC6Q96SB8 1091 aa11.77□□□□□ -0.53
PRPF40A-203ENST00000448428 MECRQ9BV79 373 aa11.77□□□□□ -0.53
PRPF40A-203ENST00000448428 EBPLQ9BY08 206 aa11.77□□□□□ -0.53
PRPF40A-203ENST00000448428 OR10A5Q9H207 317 aa11.77□□□□□ -0.53
PRPF40A-203ENST00000448428 ZNF835Q9Y2P0 537 aa11.77□□□□□ -0.53
PRPF40A-203ENST00000448428 CCL27Q9Y4X3 112 aa11.77□□□□□ -0.53
PRPF40A-203ENST00000448428 ZNF780BQ9Y6R6 833 aa11.77□□□□□ -0.53
PRPF40A-203ENST00000448428 ICE1Q9Y2F5 2266 aa11.77□□□□□ -0.53
PRPF40A-203ENST00000448428 ASH1LQ9NR48 2969 aaKnown RBP11.77□□□□□ -0.53
PRPF40A-203ENST00000448428 DIDO1Q9BTC0 2240 aaKnown RBP11.76□□□□□ -0.53
PRPF40A-203ENST00000448428 TRGV8A0A0C4DH27 118 aa11.76□□□□□ -0.53
PRPF40A-203ENST00000448428 A0A0G2JMM0 328 aa11.76□□□□□ -0.53
PRPF40A-203ENST00000448428 A0A1W2PPB8 328 aa11.76□□□□□ -0.53
PRPF40A-203ENST00000448428 A0A1W2PRS3 328 aa11.76□□□□□ -0.53
PRPF40A-203ENST00000448428 CYSRT1A8MQ03 144 aa11.76□□□□□ -0.53
PRPF40A-203ENST00000448428 KIR3DP1A8MWS1 328 aa11.76□□□□□ -0.53
PRPF40A-203ENST00000448428 G3V3Y1 287 aa11.76□□□□□ -0.53
PRPF40A-203ENST00000448428 HS6ST1O60243 411 aa11.76□□□□□ -0.53
PRPF40A-203ENST00000448428 SLC19A2O60779 497 aa11.76□□□□□ -0.53
PRPF40A-203ENST00000448428 ATP1B1P05026 303 aa11.76□□□□□ -0.53
PRPF40A-203ENST00000448428 CCL3P10147 92 aa11.76□□□□□ -0.53
PRPF40A-203ENST00000448428 CA7P43166 264 aa11.76□□□□□ -0.53
PRPF40A-203ENST00000448428 HSF1Q00613 529 aa11.76□□□□□ -0.53
PRPF40A-203ENST00000448428 RBPJQ06330 500 aa11.76□□□□□ -0.53
PRPF40A-203ENST00000448428 ZNF844Q08AG5 666 aa11.76□□□□□ -0.53
PRPF40A-203ENST00000448428 IMPG1Q17R60 797 aa11.76□□□□□ -0.53
PRPF40A-203ENST00000448428 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.76□□□□□ -0.532e-6■□□□□ 8.3
PRPF40A-203ENST00000448428 KRT71Q3SY84 523 aa11.76□□□□□ -0.53
PRPF40A-203ENST00000448428 TMEM64Q6YI46 380 aa11.76□□□□□ -0.53
PRPF40A-203ENST00000448428 SPPL2CQ8IUH8 684 aa11.76□□□□□ -0.53
PRPF40A-203ENST00000448428 CCDC116Q8IYX3 515 aa11.76□□□□□ -0.53
PRPF40A-203ENST00000448428 ZNF441Q8N8Z8 693 aa11.76□□□□□ -0.53
PRPF40A-203ENST00000448428 SIMC1Q8NDZ2 872 aa11.76□□□□□ -0.53
PRPF40A-203ENST00000448428 OR7G1Q8NGA0 311 aa11.76□□□□□ -0.53
PRPF40A-203ENST00000448428 ADIPOR1Q96A54 375 aa11.76□□□□□ -0.53
PRPF40A-203ENST00000448428 TP53INP1Q96A56 240 aa11.76□□□□□ -0.53
PRPF40A-203ENST00000448428 CTHRC1Q96CG8 243 aa11.76□□□□□ -0.53
PRPF40A-203ENST00000448428 SPACA9Q96E40 222 aaPredicted RBP11.76□□□□□ -0.53
PRPF40A-203ENST00000448428 TRMOQ9BU70 441 aa11.76□□□□□ -0.53
PRPF40A-203ENST00000448428 BRINP2Q9C0B6 783 aa11.76□□□□□ -0.53
PRPF40A-203ENST00000448428 SH2D2AQ9NP31 389 aa11.76□□□□□ -0.53
PRPF40A-203ENST00000448428 RRAGDQ9NQL2 400 aaPredicted RBP11.76□□□□□ -0.53
PRPF40A-203ENST00000448428 SACM1LQ9NTJ5 587 aa11.76□□□□□ -0.53
PRPF40A-203ENST00000448428 MAT2BQ9NZL9 334 aa11.76□□□□□ -0.53
PRPF40A-203ENST00000448428 PLEKHB1Q9UF11 243 aaPredicted RBP11.76□□□□□ -0.53
PRPF40A-203ENST00000448428 ZNF639Q9UID6 485 aa11.76□□□□□ -0.53
PRPF40A-203ENST00000448428 UTS2RQ9UKP6 389 aa11.76□□□□□ -0.53
PRPF40A-203ENST00000448428 PTGDR2Q9Y5Y4 395 aa11.76□□□□□ -0.53
PRPF40A-203ENST00000448428 USP9XQ93008 2570 aaPredicted RBP11.76□□□□□ -0.53
PRPF40A-203ENST00000448428 A1L4Q6 167 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms