RNA–Protein interactions for RNA: ENST00000447124.1

SDC1-205, Transcript of syndecan 1, humanhuman

TSL 4

Gene SDC1, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-205ENST00000447124 RUBCNLQ9H714 662 aa19.12■□□□□ 0.65
SDC1-205ENST00000447124 SDAD1Q9NVU7 687 aaKnown RBP eCLIP19.12■□□□□ 0.65
SDC1-205ENST00000447124 SLC12A4Q9UP95 1085 aa19.12■□□□□ 0.65
SDC1-205ENST00000447124 SEC23IPQ9Y6Y8 1000 aaKnown RBP19.12■□□□□ 0.65
SDC1-205ENST00000447124 ADGRG4Q8IZF6 3080 aa19.12■□□□□ 0.65
SDC1-205ENST00000447124 DCHS2Q6V1P9 2916 aa19.11■□□□□ 0.65
SDC1-205ENST00000447124 ATP6AP2A0A1C7CYW4 349 aa19.11■□□□□ 0.65
SDC1-205ENST00000447124 ATP6AP2O75787 350 aa19.11■□□□□ 0.65
SDC1-205ENST00000447124 OR4F21O95013 312 aa19.11■□□□□ 0.65
SDC1-205ENST00000447124 OTCP00480 354 aa19.11■□□□□ 0.65
SDC1-205ENST00000447124 RFPL3SP0C7P2 107 aa19.11■□□□□ 0.65
SDC1-205ENST00000447124 COX6B1P14854 86 aa19.11■□□□□ 0.65
SDC1-205ENST00000447124 S1PR1P21453 382 aa19.11■□□□□ 0.65
SDC1-205ENST00000447124 PIK3R1P27986 724 aa19.11■□□□□ 0.65
SDC1-205ENST00000447124 CLCQ05315 142 aa19.11■□□□□ 0.65
SDC1-205ENST00000447124 SLC10A1Q14973 349 aa19.11■□□□□ 0.65
SDC1-205ENST00000447124 TCHHL1Q5QJ38 904 aaPredicted RBP19.11■□□□□ 0.65
SDC1-205ENST00000447124 C10orf62Q5T681 223 aaPredicted RBP19.11■□□□□ 0.65
SDC1-205ENST00000447124 TRMT10CQ7L0Y3 403 aaKnown RBP19.11■□□□□ 0.65
SDC1-205ENST00000447124 SLC29A4Q7RTT9 530 aa19.11■□□□□ 0.65
SDC1-205ENST00000447124 COMMD6Q7Z4G1 85 aa19.11■□□□□ 0.65
SDC1-205ENST00000447124 IFT20Q8IY31 132 aa19.11■□□□□ 0.65
SDC1-205ENST00000447124 EID3Q8N140 333 aa19.11■□□□□ 0.65
SDC1-205ENST00000447124 CEP112Q8N8E3 955 aa19.11■□□□□ 0.65
SDC1-205ENST00000447124 ZNF615Q8N8J6 731 aa19.11■□□□□ 0.65
SDC1-205ENST00000447124 OR10G3Q8NGC4 313 aa19.11■□□□□ 0.65
SDC1-205ENST00000447124 SELENOMQ8WWX9 145 aa19.11■□□□□ 0.65
SDC1-205ENST00000447124 TM4SF18Q96CE8 201 aa19.11■□□□□ 0.65
SDC1-205ENST00000447124 TRIM8Q9BZR9 551 aa19.11■□□□□ 0.65
SDC1-205ENST00000447124 TP63Q9H3D4 680 aaPredicted RBP19.11■□□□□ 0.65
SDC1-205ENST00000447124 PNPLA3Q9NST1 481 aa19.11■□□□□ 0.65
SDC1-205ENST00000447124 TNFRSF10DQ9UBN6 386 aa19.11■□□□□ 0.65
SDC1-205ENST00000447124 CNOT11Q9UKZ1 510 aaKnown RBP19.11■□□□□ 0.65
SDC1-205ENST00000447124 PCDHA9Q9Y5H5 950 aa19.11■□□□□ 0.65
SDC1-205ENST00000447124 CHCHD2Q9Y6H1 151 aaPredicted RBP19.11■□□□□ 0.65
SDC1-205ENST00000447124 OR6C76A6NM76 312 aa19.1■□□□□ 0.65
SDC1-205ENST00000447124 KIF2AO00139 706 aaPredicted RBP19.1■□□□□ 0.65
SDC1-205ENST00000447124 PTGER4P35408 488 aa19.1■□□□□ 0.65
SDC1-205ENST00000447124 SOX18P35713 384 aa19.1■□□□□ 0.65
SDC1-205ENST00000447124 ZNF678Q5SXM1 525 aa19.1■□□□□ 0.65
SDC1-205ENST00000447124 PRAMEF20Q5VT98 475 aa19.1■□□□□ 0.65
SDC1-205ENST00000447124 TMEM211Q6ICI0 200 aa19.1■□□□□ 0.65
SDC1-205ENST00000447124 ACBD4Q8NC06 268 aa19.1■□□□□ 0.65
SDC1-205ENST00000447124 OR5M9Q8NGP3 310 aa19.1■□□□□ 0.65
SDC1-205ENST00000447124 ADIPOR1Q96A54 375 aa19.1■□□□□ 0.65
SDC1-205ENST00000447124 SMC6Q96SB8 1091 aa19.1■□□□□ 0.65
SDC1-205ENST00000447124 HBEGFQ99075 208 aa19.1■□□□□ 0.65
SDC1-205ENST00000447124 RNF6Q9Y252 685 aa19.1■□□□□ 0.65
SDC1-205ENST00000447124 PDZD2O15018 2839 aa19.09■□□□□ 0.65
SDC1-205ENST00000447124 C2orf92A0A1B0GVN3 265 aa19.09■□□□□ 0.65
SDC1-205ENST00000447124 SUPT7LO94864 414 aa19.09■□□□□ 0.65
SDC1-205ENST00000447124 LRATO95237 230 aa19.09■□□□□ 0.65
SDC1-205ENST00000447124 RHOXF2BP0C7M4 288 aa19.09■□□□□ 0.65
SDC1-205ENST00000447124 CPMP14384 443 aa19.09■□□□□ 0.65
SDC1-205ENST00000447124 CHN1P15882 459 aa19.09■□□□□ 0.65
SDC1-205ENST00000447124 SERPINB3P29508 390 aa19.09■□□□□ 0.65
SDC1-205ENST00000447124 MAPK12P53778 367 aa19.09■□□□□ 0.65
SDC1-205ENST00000447124 NUP107P57740 925 aa19.09■□□□□ 0.65
SDC1-205ENST00000447124 MGAT2Q10469 447 aa19.09■□□□□ 0.65
SDC1-205ENST00000447124 PMPCAQ10713 525 aa19.09■□□□□ 0.65
SDC1-205ENST00000447124 SLC29A2Q14542 456 aa19.09■□□□□ 0.65
SDC1-205ENST00000447124 PAGE2Q7Z2X7 111 aa19.09■□□□□ 0.65
SDC1-205ENST00000447124 CCDC71Q8IV32 467 aaPredicted RBP19.09■□□□□ 0.65
SDC1-205ENST00000447124 GALNT12Q8IXK2 581 aa19.09■□□□□ 0.65
SDC1-205ENST00000447124 FBXW8Q8N3Y1 598 aa19.09■□□□□ 0.65
SDC1-205ENST00000447124 LRRN4CLQ8ND94 238 aa19.09■□□□□ 0.65
SDC1-205ENST00000447124 CA5BP1Q8WTZ4 195 aa19.09■□□□□ 0.65
SDC1-205ENST00000447124 MZB1Q8WU39 189 aa19.09■□□□□ 0.65
SDC1-205ENST00000447124 TP53INP1Q96A56 240 aa19.09■□□□□ 0.65
SDC1-205ENST00000447124 MTBPQ96DY7 904 aa19.09■□□□□ 0.65
SDC1-205ENST00000447124 RHOXF2Q9BQY4 288 aa19.09■□□□□ 0.65
SDC1-205ENST00000447124 OR10A5Q9H207 317 aa19.09■□□□□ 0.65
SDC1-205ENST00000447124 BRF2Q9HAW0 419 aa19.09■□□□□ 0.65
SDC1-205ENST00000447124 TRPS1Q9UHF7 1281 aa19.09■□□□□ 0.65
SDC1-205ENST00000447124 SNX6Q9UNH7 406 aa19.09■□□□□ 0.65
SDC1-205ENST00000447124 LRRC3CA6NJW4 275 aa19.08■□□□□ 0.64
SDC1-205ENST00000447124 GOLGA8RI6L899 631 aa19.08■□□□□ 0.64
SDC1-205ENST00000447124 MANBAO00462 879 aa19.08■□□□□ 0.64
SDC1-205ENST00000447124 AQP7O14520 342 aa19.08■□□□□ 0.64
SDC1-205ENST00000447124 PORP16435 677 aaPredicted RBP19.08■□□□□ 0.64
SDC1-205ENST00000447124 ENDOUP21128 410 aaKnown RBP19.08■□□□□ 0.64
SDC1-205ENST00000447124 NT5EP21589 574 aa19.08■□□□□ 0.64
SDC1-205ENST00000447124 DUSP2Q05923 314 aa19.08■□□□□ 0.64
SDC1-205ENST00000447124 NTRK2Q16620 822 aa19.08■□□□□ 0.64
SDC1-205ENST00000447124 RTL6Q6ICC9 239 aa19.08■□□□□ 0.64
SDC1-205ENST00000447124 SLC48A1Q6P1K1 146 aa19.08■□□□□ 0.64
SDC1-205ENST00000447124 FAM111BQ6SJ93 734 aa19.08■□□□□ 0.64
SDC1-205ENST00000447124 CDYL2Q8N8U2 506 aa19.08■□□□□ 0.64
SDC1-205ENST00000447124 FAM13CQ8NE31 585 aa19.08■□□□□ 0.64
SDC1-205ENST00000447124 OR5M3Q8NGP4 307 aa19.08■□□□□ 0.64
SDC1-205ENST00000447124 LILRB4Q8NHJ6 448 aa19.08■□□□□ 0.64
SDC1-205ENST00000447124 CHTF18Q8WVB6 975 aa19.08■□□□□ 0.64
SDC1-205ENST00000447124 TMEM237Q96Q45 408 aa19.08■□□□□ 0.64
SDC1-205ENST00000447124 UCK2Q9BZX2 261 aa19.08■□□□□ 0.64
SDC1-205ENST00000447124 ENKD1Q9H0I2 346 aa19.08■□□□□ 0.64
SDC1-205ENST00000447124 ZFP64Q9NPA5 681 aa19.08■□□□□ 0.64
SDC1-205ENST00000447124 COQ3Q9NZJ6 369 aa19.08■□□□□ 0.64
SDC1-205ENST00000447124 CNIH4Q9P003 139 aa19.08■□□□□ 0.64
SDC1-205ENST00000447124 OR14I1A6ND48 311 aa19.07■□□□□ 0.64
SDC1-205ENST00000447124 SUSD5O60279 629 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms