RNA–Protein interactions for RNA: ENST00000445866.6

SGCE-206, Transcript of sarcoglycan epsilon, humanhuman

TSL 5 BASIC

Gene SGCE, Length 1,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-206ENST00000445866 SCN3AQ9NY46 2000 aa16.26■□□□□ 0.19
SGCE-206ENST00000445866 FBP2O00757 339 aa16.26■□□□□ 0.19
SGCE-206ENST00000445866 SEC24DO94855 1032 aaPredicted RBP16.26■□□□□ 0.19
SGCE-206ENST00000445866 ANP32DO95626 131 aa16.26■□□□□ 0.19
SGCE-206ENST00000445866 GSNP06396 782 aa16.26■□□□□ 0.19
SGCE-206ENST00000445866 TRPC1P48995 793 aa16.26■□□□□ 0.19
SGCE-206ENST00000445866 MGAT2Q10469 447 aa16.26■□□□□ 0.19
SGCE-206ENST00000445866 MAP4K2Q12851 820 aa16.26■□□□□ 0.19
SGCE-206ENST00000445866 PRICKLE4Q2TBC4 344 aa16.26■□□□□ 0.19
SGCE-206ENST00000445866 SPDYE7PQ495Y7 208 aa16.26■□□□□ 0.19
SGCE-206ENST00000445866 TRMT12Q53H54 448 aaKnown RBP16.26■□□□□ 0.19
SGCE-206ENST00000445866 TMEM107Q6UX40 140 aa16.26■□□□□ 0.19
SGCE-206ENST00000445866 PPP1R32Q7Z5V6 425 aa16.26■□□□□ 0.19
SGCE-206ENST00000445866 RAB43Q86YS6 212 aa16.26■□□□□ 0.19
SGCE-206ENST00000445866 GALNT12Q8IXK2 581 aa16.26■□□□□ 0.19
SGCE-206ENST00000445866 ELP4Q96EB1 424 aa16.26■□□□□ 0.19
SGCE-206ENST00000445866 SENP5Q96HI0 755 aaPredicted RBP16.26■□□□□ 0.19
SGCE-206ENST00000445866 LPAR4Q99677 370 aa16.26■□□□□ 0.19
SGCE-206ENST00000445866 NPAS2Q99743 824 aa16.26■□□□□ 0.19
SGCE-206ENST00000445866 EFCAB1Q9HAE3 211 aa16.26■□□□□ 0.19
SGCE-206ENST00000445866 IL1RL2Q9HB29 575 aa16.26■□□□□ 0.19
SGCE-206ENST00000445866 SERHLQ9NQF3 203 aa16.26■□□□□ 0.19
SGCE-206ENST00000445866 MAP10Q9P2G4 905 aa16.26■□□□□ 0.19
SGCE-206ENST00000445866 TAGLN3Q9UI15 199 aa16.26■□□□□ 0.19
SGCE-206ENST00000445866 FREM2Q5SZK8 3169 aa16.26■□□□□ 0.19
SGCE-206ENST00000445866 LOC102723996A0A087X1L8 192 aa16.25■□□□□ 0.19
SGCE-206ENST00000445866 PEX12O00623 359 aa16.25■□□□□ 0.19
SGCE-206ENST00000445866 SOCS6O14544 535 aa16.25■□□□□ 0.19
SGCE-206ENST00000445866 AIM2O14862 343 aa16.25■□□□□ 0.19
SGCE-206ENST00000445866 CT62P0C5K7 136 aa16.25■□□□□ 0.19
SGCE-206ENST00000445866 ESRRAP11474 423 aaPredicted RBP16.25■□□□□ 0.19
SGCE-206ENST00000445866 CDK9P50750 372 aaKnown RBP16.25■□□□□ 0.19
SGCE-206ENST00000445866 MRPS35P82673 323 aaKnown RBP16.25■□□□□ 0.19
SGCE-206ENST00000445866 GABPB1Q06547 395 aaPredicted RBP16.25■□□□□ 0.19
SGCE-206ENST00000445866 IL10RAQ13651 578 aa16.25■□□□□ 0.19
SGCE-206ENST00000445866 PAPD4Q6PIY7 484 aaKnown RBP16.25■□□□□ 0.19
SGCE-206ENST00000445866 NDUFAF7Q7L592 441 aa16.25■□□□□ 0.19
SGCE-206ENST00000445866 RETREG3Q86VR2 466 aa16.25■□□□□ 0.19
SGCE-206ENST00000445866 PCYOX1LQ8NBM8 494 aa16.25■□□□□ 0.19
SGCE-206ENST00000445866 OR11G2Q8NGC1 345 aa16.25■□□□□ 0.19
SGCE-206ENST00000445866 OR14A16Q8NHC5 309 aa16.25■□□□□ 0.19
SGCE-206ENST00000445866 VPS50Q96JG6 964 aa16.25■□□□□ 0.19
SGCE-206ENST00000445866 CCNL2Q96S94 520 aaPredicted RBP16.25■□□□□ 0.19
SGCE-206ENST00000445866 TUBB6Q9BUF5 446 aa16.25■□□□□ 0.19
SGCE-206ENST00000445866 CNPPD1Q9BV87 410 aa16.25■□□□□ 0.19
SGCE-206ENST00000445866 OR8D2Q9GZM6 311 aa16.25■□□□□ 0.19
SGCE-206ENST00000445866 ZNF700Q9H0M5 742 aa16.25■□□□□ 0.19
SGCE-206ENST00000445866 CXorf36Q9H7Y0 433 aa16.25■□□□□ 0.19
SGCE-206ENST00000445866 C3orf14Q9HBI5 128 aa16.25■□□□□ 0.19
SGCE-206ENST00000445866 MAT2BQ9NZL9 334 aa16.25■□□□□ 0.19
SGCE-206ENST00000445866 SLAMF8Q9P0V8 285 aa16.25■□□□□ 0.19
SGCE-206ENST00000445866 CEP295Q9C0D2 2601 aa16.25■□□□□ 0.19
SGCE-206ENST00000445866 BBIP1A8MTZ0 92 aa16.24■□□□□ 0.19
SGCE-206ENST00000445866 MRASO14807 208 aa16.24■□□□□ 0.19
SGCE-206ENST00000445866 NKX2-8O15522 239 aa16.24■□□□□ 0.19
SGCE-206ENST00000445866 RRP8O43159 456 aaKnown RBP16.24■□□□□ 0.19
SGCE-206ENST00000445866 CBX6O95503 412 aa16.24■□□□□ 0.19
SGCE-206ENST00000445866 MC3RP41968 323 aa16.24■□□□□ 0.19
SGCE-206ENST00000445866 CDKN2CP42773 168 aa16.24■□□□□ 0.19
SGCE-206ENST00000445866 CCT3P49368 545 aaKnown RBP16.24■□□□□ 0.19
SGCE-206ENST00000445866 PRKAG1P54619 331 aa16.24■□□□□ 0.19
SGCE-206ENST00000445866 ZNF628Q5EBL2 1059 aa16.24■□□□□ 0.19
SGCE-206ENST00000445866 VWA5B2Q8N398 1253 aa16.24■□□□□ 0.19
SGCE-206ENST00000445866 RCN3Q96D15 328 aa16.24■□□□□ 0.19
SGCE-206ENST00000445866 ANKRA2Q9H9E1 313 aa16.24■□□□□ 0.19
SGCE-206ENST00000445866 NEUROD4Q9HD90 331 aa16.24■□□□□ 0.19
SGCE-206ENST00000445866 P4HTMQ9NXG6 502 aa16.24■□□□□ 0.19
SGCE-206ENST00000445866 VPS4AQ9UN37 437 aa16.24■□□□□ 0.19
SGCE-206ENST00000445866 MAN2B2Q9Y2E5 1009 aa16.24■□□□□ 0.19
SGCE-206ENST00000445866 ASPMQ8IZT6 3477 aa16.24■□□□□ 0.19
SGCE-206ENST00000445866 AKAP13Q12802 2813 aa16.24■□□□□ 0.19
SGCE-206ENST00000445866 IGHV1-45A0A0A0MS14 117 aa16.24■□□□□ 0.19
SGCE-206ENST00000445866 HRKO00198 91 aa16.24■□□□□ 0.19
SGCE-206ENST00000445866 PLOD2O00469 737 aa16.24■□□□□ 0.19
SGCE-206ENST00000445866 ERN1O75460 977 aaKnown RBP16.24■□□□□ 0.19
SGCE-206ENST00000445866 KCNH1O95259 989 aa16.24■□□□□ 0.19
SGCE-206ENST00000445866 SOAT1P35610 550 aa16.24■□□□□ 0.19
SGCE-206ENST00000445866 CPA2P48052 419 aa16.24■□□□□ 0.19
SGCE-206ENST00000445866 MNAT1P51948 309 aa16.24■□□□□ 0.19
SGCE-206ENST00000445866 ART3Q13508 389 aa16.24■□□□□ 0.19
SGCE-206ENST00000445866 NFYCQ13952 458 aa16.24■□□□□ 0.19
SGCE-206ENST00000445866 REP15Q6BDI9 236 aa16.24■□□□□ 0.19
SGCE-206ENST00000445866 C6orf89Q6UWU4 347 aa16.24■□□□□ 0.19
SGCE-206ENST00000445866 DPP10Q8N608 796 aa16.24■□□□□ 0.19
SGCE-206ENST00000445866 TRIML2Q8N7C3 387 aa16.24■□□□□ 0.19
SGCE-206ENST00000445866 MORN4Q8NDC4 146 aa16.24■□□□□ 0.19
SGCE-206ENST00000445866 OR7G2Q8NG99 324 aa16.24■□□□□ 0.19
SGCE-206ENST00000445866 GOT1L1Q8NHS2 421 aaPredicted RBP16.24■□□□□ 0.19
SGCE-206ENST00000445866 PSMA8Q8TAA3 256 aa16.24■□□□□ 0.19
SGCE-206ENST00000445866 ZNF675Q8TD23 568 aa16.24■□□□□ 0.19
SGCE-206ENST00000445866 CTHRC1Q96CG8 243 aa16.24■□□□□ 0.19
SGCE-206ENST00000445866 IP6K3Q96PC2 410 aa16.24■□□□□ 0.19
SGCE-206ENST00000445866 WDR77Q9BQA1 342 aaPredicted RBP16.24■□□□□ 0.19
SGCE-206ENST00000445866 DDX18Q9NVP1 670 aaKnown RBP16.24■□□□□ 0.19
SGCE-206ENST00000445866 GID8Q9NWU2 228 aa16.24■□□□□ 0.19
SGCE-206ENST00000445866 PTGFRNQ9P2B2 879 aa16.24■□□□□ 0.19
SGCE-206ENST00000445866 BCAP29Q9UHQ4 241 aa16.24■□□□□ 0.19
SGCE-206ENST00000445866 ERVK-19Q9WJR5 959 aa16.24■□□□□ 0.19
SGCE-206ENST00000445866 NCOR2Q9Y618 2525 aa16.24■□□□□ 0.19
SGCE-206ENST00000445866 PTPRBP23467 1997 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms