RNA–Protein interactions for RNA: ENST00000444061.7

SMARCA4-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 4,938 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-204ENST00000444061 TDRD15B5MCY1 1934 aaKnown RBP13.37□□□□□ -0.27
SMARCA4-204ENST00000444061 C4orf47A7E2U8 309 aa13.37□□□□□ -0.27
SMARCA4-204ENST00000444061 VILLO15195 856 aa13.37□□□□□ -0.27
SMARCA4-204ENST00000444061 GPR37L1O60883 481 aa13.37□□□□□ -0.27
SMARCA4-204ENST00000444061 UGT2B11O75310 529 aa13.37□□□□□ -0.27
SMARCA4-204ENST00000444061 SDC1P18827 310 aa13.37□□□□□ -0.27
SMARCA4-204ENST00000444061 REEP5Q00765 189 aa13.37□□□□□ -0.27
SMARCA4-204ENST00000444061 TRAF3Q13114 568 aa13.37□□□□□ -0.27
SMARCA4-204ENST00000444061 NDUFA5Q16718 116 aa13.37□□□□□ -0.27
SMARCA4-204ENST00000444061 SMARCD3Q6STE5 483 aa13.37□□□□□ -0.27
SMARCA4-204ENST00000444061 MSANTD1Q6ZTZ1 278 aa13.37□□□□□ -0.27
SMARCA4-204ENST00000444061 ZNF740Q8NDX6 193 aa13.37□□□□□ -0.27
SMARCA4-204ENST00000444061 WDR36Q8NI36 951 aaKnown RBP13.37□□□□□ -0.27
SMARCA4-204ENST00000444061 MYDGFQ969H8 173 aa13.37□□□□□ -0.27
SMARCA4-204ENST00000444061 MSLNLQ96KJ4 702 aa13.37□□□□□ -0.27
SMARCA4-204ENST00000444061 MYNNQ9NPC7 610 aa13.37□□□□□ -0.27
SMARCA4-204ENST00000444061 SNX4O95219 450 aa13.37□□□□□ -0.27
SMARCA4-204ENST00000444061 ACPPP15309 386 aa13.37□□□□□ -0.27
SMARCA4-204ENST00000444061 TCN2P20062 427 aa13.37□□□□□ -0.27
SMARCA4-204ENST00000444061 TXNL4AP83876 142 aaKnown RBP13.37□□□□□ -0.27
SMARCA4-204ENST00000444061 CYBRD1Q53TN4 286 aa13.37□□□□□ -0.27
SMARCA4-204ENST00000444061 TMEM214Q6NUQ4 689 aaKnown RBP13.37□□□□□ -0.27
SMARCA4-204ENST00000444061 SLC30A6Q6NXT4 461 aa13.37□□□□□ -0.27
SMARCA4-204ENST00000444061 KLHL24Q6TFL4 600 aa13.37□□□□□ -0.27
SMARCA4-204ENST00000444061 ABRAXAS1Q6UWZ7 409 aa13.37□□□□□ -0.27
SMARCA4-204ENST00000444061 ZNF540Q8NDQ6 660 aa13.37□□□□□ -0.27
SMARCA4-204ENST00000444061 MOSPD2Q8NHP6 518 aa13.37□□□□□ -0.27
SMARCA4-204ENST00000444061 BORCS5Q969J3 196 aa13.37□□□□□ -0.27
SMARCA4-204ENST00000444061 DIABLOQ9NR28 239 aa13.37□□□□□ -0.27
SMARCA4-204ENST00000444061 KLHL1Q9NR64 748 aa13.37□□□□□ -0.27
SMARCA4-204ENST00000444061 IKZF2Q9UKS7 526 aa13.37□□□□□ -0.27
SMARCA4-204ENST00000444061 MED31Q9Y3C7 131 aa13.37□□□□□ -0.27
SMARCA4-204ENST00000444061 FOXE1O00358 373 aaPredicted RBP13.36□□□□□ -0.27
SMARCA4-204ENST00000444061 GPR75O95800 540 aa13.36□□□□□ -0.27
SMARCA4-204ENST00000444061 ANXA8P13928 327 aa13.36□□□□□ -0.27
SMARCA4-204ENST00000444061 XRCC1P18887 633 aaPredicted RBP13.36□□□□□ -0.27
SMARCA4-204ENST00000444061 CSNK1G2P78368 415 aa13.36□□□□□ -0.27
SMARCA4-204ENST00000444061 RSBN1Q5VWQ0 802 aaPredicted RBP13.36□□□□□ -0.27
SMARCA4-204ENST00000444061 CDRT4Q8N9R6 151 aa13.36□□□□□ -0.27
SMARCA4-204ENST00000444061 RCBTB1Q8NDN9 531 aa13.36□□□□□ -0.27
SMARCA4-204ENST00000444061 ERVK-19Q9WJR5 959 aa13.36□□□□□ -0.27
SMARCA4-204ENST00000444061 DPPA5A6NC42 116 aa13.36□□□□□ -0.27
SMARCA4-204ENST00000444061 CLCN2P51788 898 aa13.36□□□□□ -0.27
SMARCA4-204ENST00000444061 ERV3-1Q14264 604 aa13.36□□□□□ -0.27
SMARCA4-204ENST00000444061 GPR19Q15760 415 aa13.36□□□□□ -0.27
SMARCA4-204ENST00000444061 GGTA1PQ4G0N0 100 aa13.36□□□□□ -0.27
SMARCA4-204ENST00000444061 NANOGNBQ7Z5D8 188 aa13.36□□□□□ -0.27
SMARCA4-204ENST00000444061 CLEC14AQ86T13 490 aa13.36□□□□□ -0.27
SMARCA4-204ENST00000444061 ASPNQ9BXN1 380 aa13.36□□□□□ -0.27
SMARCA4-204ENST00000444061 ACTR3BQ9P1U1 418 aa13.36□□□□□ -0.27
SMARCA4-204ENST00000444061 PRR23D1E9PI22 279 aaPredicted RBP13.36□□□□□ -0.27
SMARCA4-204ENST00000444061 PRR23D2P0DMB1 279 aaPredicted RBP13.36□□□□□ -0.27
SMARCA4-204ENST00000444061 RPS6KA3P51812 740 aa13.36□□□□□ -0.27
SMARCA4-204ENST00000444061 ARG2P78540 354 aa13.36□□□□□ -0.27
SMARCA4-204ENST00000444061 MYBPC1Q00872 1141 aa13.36□□□□□ -0.27
SMARCA4-204ENST00000444061 SLC5A12Q1EHB4 618 aa13.36□□□□□ -0.27
SMARCA4-204ENST00000444061 CRB2Q5IJ48 1285 aa13.36□□□□□ -0.27
SMARCA4-204ENST00000444061 ZNF595Q8IYB9 648 aa13.36□□□□□ -0.27
SMARCA4-204ENST00000444061 OR9A2Q8NGT5 310 aa13.36□□□□□ -0.27
SMARCA4-204ENST00000444061 SNIP1Q8TAD8 396 aaKnown RBP13.36□□□□□ -0.27
SMARCA4-204ENST00000444061 S100ZQ8WXG8 99 aa13.36□□□□□ -0.27
SMARCA4-204ENST00000444061 ACTRT3Q9BYD9 372 aa13.36□□□□□ -0.27
SMARCA4-204ENST00000444061 H3BNX3 289 aa13.36□□□□□ -0.27
SMARCA4-204ENST00000444061 CSF2P04141 144 aa13.36□□□□□ -0.27
SMARCA4-204ENST00000444061 NPPBP16860 134 aa13.36□□□□□ -0.27
SMARCA4-204ENST00000444061 AVPR2P30518 371 aa13.36□□□□□ -0.27
SMARCA4-204ENST00000444061 VASPP50552 380 aaPredicted RBP13.36□□□□□ -0.27
SMARCA4-204ENST00000444061 MAT1AQ00266 395 aaKnown RBP13.36□□□□□ -0.27
SMARCA4-204ENST00000444061 NEDD8Q15843 81 aa13.36□□□□□ -0.27
SMARCA4-204ENST00000444061 VMACQ2NL98 169 aa13.36□□□□□ -0.27
SMARCA4-204ENST00000444061 CYP27C1Q4G0S4 372 aa13.36□□□□□ -0.27
SMARCA4-204ENST00000444061 HSH2DQ96JZ2 352 aa13.36□□□□□ -0.27
SMARCA4-204ENST00000444061 LINC00615Q96LM1 132 aaPredicted RBP13.36□□□□□ -0.27
SMARCA4-204ENST00000444061 MS4A4EQ96PG1 132 aa13.36□□□□□ -0.27
SMARCA4-204ENST00000444061 OR52A5Q9H2C5 316 aa13.36□□□□□ -0.27
SMARCA4-204ENST00000444061 DENND2DQ9H6A0 471 aaPredicted RBP13.36□□□□□ -0.27
SMARCA4-204ENST00000444061 EHD3Q9NZN3 535 aa13.36□□□□□ -0.27
SMARCA4-204ENST00000444061 ADAM29Q9UKF5 820 aa13.36□□□□□ -0.27
SMARCA4-204ENST00000444061 BRWD1Q9NSI6 2320 aa13.36□□□□□ -0.27
SMARCA4-204ENST00000444061 TARM1B6A8C7 271 aa13.35□□□□□ -0.27
SMARCA4-204ENST00000444061 RGS5O15539 181 aa13.35□□□□□ -0.27
SMARCA4-204ENST00000444061 EEDO75530 441 aaKnown RBP13.35□□□□□ -0.27
SMARCA4-204ENST00000444061 SYNGR4O95473 234 aa13.35□□□□□ -0.27
SMARCA4-204ENST00000444061 THRBP10828 461 aa13.35□□□□□ -0.27
SMARCA4-204ENST00000444061 SLC5A2P31639 672 aa13.35□□□□□ -0.27
SMARCA4-204ENST00000444061 MC3RP41968 323 aa13.35□□□□□ -0.27
SMARCA4-204ENST00000444061 FOLH1Q04609 750 aa13.35□□□□□ -0.27
SMARCA4-204ENST00000444061 KHDC1Q4VXA5 237 aaKnown RBP13.35□□□□□ -0.27
SMARCA4-204ENST00000444061 CEP78Q5JTW2 689 aa13.35□□□□□ -0.27
SMARCA4-204ENST00000444061 C6orf132Q5T0Z8 1188 aa13.35□□□□□ -0.27
SMARCA4-204ENST00000444061 LRTOMTQ8WZ04 291 aa13.35□□□□□ -0.27
SMARCA4-204ENST00000444061 NR4A3Q92570 626 aa13.35□□□□□ -0.27
SMARCA4-204ENST00000444061 CPSF4LA6NMK7 179 aaKnown RBP13.35□□□□□ -0.27
SMARCA4-204ENST00000444061 RAB38P57729 211 aa13.35□□□□□ -0.27
SMARCA4-204ENST00000444061 KCNC4Q03721 635 aa13.35□□□□□ -0.27
SMARCA4-204ENST00000444061 EEF1A2Q05639 463 aaKnown RBP13.35□□□□□ -0.27
SMARCA4-204ENST00000444061 OR10G2Q8NGC3 310 aa13.35□□□□□ -0.27
SMARCA4-204ENST00000444061 SLC7A8Q9UHI5 535 aa13.35□□□□□ -0.27
SMARCA4-204ENST00000444061 ADAM23O75077 832 aa13.35□□□□□ -0.27
SMARCA4-204ENST00000444061 ZNF821O75541 412 aaPredicted RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms