RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 ZNF780BQ9Y6R6 833 aa14.91□□□□□ -0.02
USP39-205ENST00000442708 TBX19O60806 448 aa14.9□□□□□ -0.02
USP39-205ENST00000442708 EDF1O60869 148 aaKnown RBP14.9□□□□□ -0.02
USP39-205ENST00000442708 NT5EP21589 574 aa14.9□□□□□ -0.02
USP39-205ENST00000442708 SSTR4P31391 388 aa14.9□□□□□ -0.02
USP39-205ENST00000442708 ASMTP46597 345 aa14.9□□□□□ -0.02
USP39-205ENST00000442708 CLCN2P51788 898 aa14.9□□□□□ -0.02
USP39-205ENST00000442708 DUSP8Q13202 625 aa14.9□□□□□ -0.02
USP39-205ENST00000442708 MFAP5Q13361 173 aa14.9□□□□□ -0.02
USP39-205ENST00000442708 TRMT12Q53H54 448 aaKnown RBP14.9□□□□□ -0.02
USP39-205ENST00000442708 CRB2Q5IJ48 1285 aa14.9□□□□□ -0.02
USP39-205ENST00000442708 COLEC12Q5KU26 742 aa14.9□□□□□ -0.02
USP39-205ENST00000442708 ACER2Q5QJU3 275 aa14.9□□□□□ -0.02
USP39-205ENST00000442708 IRAK1BP1Q5VVH5 260 aa14.9□□□□□ -0.02
USP39-205ENST00000442708 TMEM198Q66K66 360 aa14.9□□□□□ -0.02
USP39-205ENST00000442708 ISLR2Q6UXK2 745 aa14.9□□□□□ -0.02
USP39-205ENST00000442708 GALNT12Q8IXK2 581 aa14.9□□□□□ -0.02
USP39-205ENST00000442708 RIMKLAQ8IXN7 391 aa14.9□□□□□ -0.02
USP39-205ENST00000442708 C9orf40Q8IXQ3 194 aa14.9□□□□□ -0.02
USP39-205ENST00000442708 LRRC34Q8IZ02 419 aa14.9□□□□□ -0.02
USP39-205ENST00000442708 LSM14AQ8ND56 463 aaKnown RBP14.9□□□□□ -0.02
USP39-205ENST00000442708 C7orf57Q8NEG2 295 aa14.9□□□□□ -0.02
USP39-205ENST00000442708 THAP3Q8WTV1 239 aaPredicted RBP14.9□□□□□ -0.02
USP39-205ENST00000442708 CIDECQ96AQ7 238 aaPredicted RBP14.9□□□□□ -0.02
USP39-205ENST00000442708 THOC1Q96FV9 657 aaKnown RBP14.9□□□□□ -0.02
USP39-205ENST00000442708 EBF4Q9BQW3 602 aa14.9□□□□□ -0.02
USP39-205ENST00000442708 ANKRA2Q9H9E1 313 aa14.9□□□□□ -0.02
USP39-205ENST00000442708 PLA2G3Q9NZ20 509 aa14.9□□□□□ -0.02
USP39-205ENST00000442708 ATP6V1HQ9UI12 483 aa14.9□□□□□ -0.02
USP39-205ENST00000442708 ZNF639Q9UID6 485 aa14.9□□□□□ -0.02
USP39-205ENST00000442708 EIF3LQ9Y262 564 aaKnown RBP14.9□□□□□ -0.02
USP39-205ENST00000442708 ZNF451Q9Y4E5 1061 aa14.9□□□□□ -0.02
USP39-205ENST00000442708 ANKRD28O15084 1053 aa14.89□□□□□ -0.03
USP39-205ENST00000442708 SCAMP2O15127 329 aaKnown RBP14.89□□□□□ -0.03
USP39-205ENST00000442708 DIAPH2O60879 1101 aa14.89□□□□□ -0.03
USP39-205ENST00000442708 F10P00742 488 aa14.89□□□□□ -0.03
USP39-205ENST00000442708 PCSK2P16519 638 aa14.89□□□□□ -0.03
USP39-205ENST00000442708 EFNA1P20827 205 aaPredicted RBP14.89□□□□□ -0.03
USP39-205ENST00000442708 IDH3AP50213 366 aa14.89□□□□□ -0.03
USP39-205ENST00000442708 SLC37A1P57057 533 aa14.89□□□□□ -0.03
USP39-205ENST00000442708 AP2B1P63010 937 aa14.89□□□□□ -0.03
USP39-205ENST00000442708 MRPS35P82673 323 aaKnown RBP14.89□□□□□ -0.03
USP39-205ENST00000442708 FUT7Q11130 342 aa14.89□□□□□ -0.03
USP39-205ENST00000442708 MAP4K2Q12851 820 aa14.89□□□□□ -0.03
USP39-205ENST00000442708 MAD2L1Q13257 205 aaPredicted RBP14.89□□□□□ -0.03
USP39-205ENST00000442708 EXOSC7Q15024 291 aaKnown RBP14.89□□□□□ -0.03
USP39-205ENST00000442708 ZNF628Q5EBL2 1059 aa14.89□□□□□ -0.03
USP39-205ENST00000442708 BEST3Q8N1M1 668 aa14.89□□□□□ -0.03
USP39-205ENST00000442708 ARMC10Q8N2F6 343 aa14.89□□□□□ -0.03
USP39-205ENST00000442708 RBMXL3Q8N7X1 1067 aaKnown RBP14.89□□□□□ -0.03
USP39-205ENST00000442708 ZNF615Q8N8J6 731 aa14.89□□□□□ -0.03
USP39-205ENST00000442708 OR9A2Q8NGT5 310 aa14.89□□□□□ -0.03
USP39-205ENST00000442708 ACTRT2Q8TDY3 377 aa14.89□□□□□ -0.03
USP39-205ENST00000442708 KAT2AQ92830 837 aa14.89□□□□□ -0.03
USP39-205ENST00000442708 PPCDCQ96CD2 204 aa14.89□□□□□ -0.03
USP39-205ENST00000442708 CTHRC1Q96CG8 243 aa14.89□□□□□ -0.03
USP39-205ENST00000442708 ZNF764Q96H86 408 aaPredicted RBP14.89□□□□□ -0.03
USP39-205ENST00000442708 MARK4Q96L34 752 aa14.89□□□□□ -0.03
USP39-205ENST00000442708 AMDHD1Q96NU7 426 aa14.89□□□□□ -0.03
USP39-205ENST00000442708 LMF1Q96S06 567 aa14.89□□□□□ -0.03
USP39-205ENST00000442708 DEFB126Q9BYW3 111 aa14.89□□□□□ -0.03
USP39-205ENST00000442708 GLIPR2Q9H4G4 154 aa14.89□□□□□ -0.03
USP39-205ENST00000442708 CDCP1Q9H5V8 836 aa14.89□□□□□ -0.03
USP39-205ENST00000442708 AIG1Q9NVV5 245 aa14.89□□□□□ -0.03
USP39-205ENST00000442708 PCDHGB7Q9Y5F8 929 aa14.89□□□□□ -0.03
USP39-205ENST00000442708 GCN1Q92616 2671 aaKnown RBP14.89□□□□□ -0.03
USP39-205ENST00000442708 C1QL1O75973 258 aa14.88□□□□□ -0.03
USP39-205ENST00000442708 CBX7O95931 251 aa14.88□□□□□ -0.03
USP39-205ENST00000442708 ALPPP05187 535 aa14.88□□□□□ -0.03
USP39-205ENST00000442708 LAMP1P11279 417 aa14.88□□□□□ -0.03
USP39-205ENST00000442708 SFTPCP11686 197 aa14.88□□□□□ -0.03
USP39-205ENST00000442708 MDH1P40925 334 aaKnown RBP14.88□□□□□ -0.03
USP39-205ENST00000442708 CLDN8P56748 225 aa14.88□□□□□ -0.03
USP39-205ENST00000442708 MLF1P58340 268 aa14.88□□□□□ -0.03
USP39-205ENST00000442708 C21orf58P58505 322 aa14.88□□□□□ -0.03
USP39-205ENST00000442708 RNF4P78317 190 aa14.88□□□□□ -0.03
USP39-205ENST00000442708 LSM12Q3MHD2 195 aaKnown RBP14.88□□□□□ -0.03
USP39-205ENST00000442708 FHL5Q5TD97 284 aa14.88□□□□□ -0.03
USP39-205ENST00000442708 ZNF468Q5VIY5 522 aaPredicted RBP14.88□□□□□ -0.03
USP39-205ENST00000442708 NXNQ6DKJ4 435 aa14.88□□□□□ -0.03
USP39-205ENST00000442708 IGFL3Q6UXB1 125 aa14.88□□□□□ -0.03
USP39-205ENST00000442708 HSDL2Q6YN16 418 aa14.88□□□□□ -0.03
USP39-205ENST00000442708 ZNF551Q7Z340 670 aaPredicted RBP14.88□□□□□ -0.03
USP39-205ENST00000442708 RPS19BP1Q86WX3 136 aaKnown RBP14.88□□□□□ -0.03
USP39-205ENST00000442708 PTRH1Q86Y79 214 aaKnown RBP14.88□□□□□ -0.03
USP39-205ENST00000442708 VWA5B2Q8N398 1253 aa14.88□□□□□ -0.03
USP39-205ENST00000442708 CATSPER1Q8NEC5 780 aa14.88□□□□□ -0.03
USP39-205ENST00000442708 RFWD2Q8NHY2 731 aa14.88□□□□□ -0.03
USP39-205ENST00000442708 MTERF3Q96E29 417 aa14.88□□□□□ -0.03
USP39-205ENST00000442708 TEX37Q96LM6 180 aa14.88□□□□□ -0.03
USP39-205ENST00000442708 BBS4Q96RK4 519 aa14.88□□□□□ -0.03
USP39-205ENST00000442708 MFRPQ9BY79 579 aa14.88□□□□□ -0.03
USP39-205ENST00000442708 BRINP2Q9C0B6 783 aa14.88□□□□□ -0.03
USP39-205ENST00000442708 CCDC134Q9H6E4 229 aa14.88□□□□□ -0.03
USP39-205ENST00000442708 STMN3Q9NZ72 180 aa14.88□□□□□ -0.03
USP39-205ENST00000442708 SH3BP4Q9P0V3 963 aa14.88□□□□□ -0.03
USP39-205ENST00000442708 G3BP2Q9UN86 482 aaKnown RBP14.88□□□□□ -0.03
USP39-205ENST00000442708 ENTPD4Q9Y227 616 aa14.88□□□□□ -0.03
USP39-205ENST00000442708 GPR45Q9Y5Y3 372 aa14.88□□□□□ -0.03
USP39-205ENST00000442708 SETXQ7Z333 2677 aaKnown RBP14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms