RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, human

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSNK1E-210	ENST00000442216	MAD2L1	Q13257	205 aa	Predicted RBP	13.96	□□□□□ -0.17
CSNK1E-210	ENST00000442216	MPEG1	Q2M385	716 aa		13.96	□□□□□ -0.17
CSNK1E-210	ENST00000442216	PRICKLE4	Q2TBC4	344 aa		13.96	□□□□□ -0.17
CSNK1E-210	ENST00000442216	GALNTL6	Q49A17	601 aa		13.96	□□□□□ -0.17
CSNK1E-210	ENST00000442216	RNF111	Q6ZNA4	994 aa		13.96	□□□□□ -0.17
CSNK1E-210	ENST00000442216	SLC29A4	Q7RTT9	530 aa		13.96	□□□□□ -0.17
CSNK1E-210	ENST00000442216	LRRC34	Q8IZ02	419 aa		13.96	□□□□□ -0.17
CSNK1E-210	ENST00000442216	MDS2	Q8NDY4	140 aa		13.96	□□□□□ -0.17
CSNK1E-210	ENST00000442216	CPT1C	Q8TCG5	803 aa		13.96	□□□□□ -0.17
CSNK1E-210	ENST00000442216	ZNF675	Q8TD23	568 aa		13.96	□□□□□ -0.17
CSNK1E-210	ENST00000442216	MGARP	Q8TDB4	240 aa		13.96	□□□□□ -0.17
CSNK1E-210	ENST00000442216	CTHRC1	Q96CG8	243 aa		13.96	□□□□□ -0.17
CSNK1E-210	ENST00000442216	ERP27	Q96DN0	273 aa		13.96	□□□□□ -0.17
CSNK1E-210	ENST00000442216	C19orf60	Q96EN9	201 aa		13.96	□□□□□ -0.17
CSNK1E-210	ENST00000442216	C3orf30	Q96M34	536 aa		13.96	□□□□□ -0.17
CSNK1E-210	ENST00000442216	ACBD3	Q9H3P7	528 aa		13.96	□□□□□ -0.17
CSNK1E-210	ENST00000442216	MANSC1	Q9H8J5	431 aa		13.96	□□□□□ -0.17
CSNK1E-210	ENST00000442216	ZNF395	Q9H8N7	513 aa	Predicted RBP	13.96	□□□□□ -0.17
CSNK1E-210	ENST00000442216	MIEF1	Q9NQG6	463 aa		13.96	□□□□□ -0.17
CSNK1E-210	ENST00000442216	SLC35C2	Q9NQQ7	365 aa		13.96	□□□□□ -0.17
CSNK1E-210	ENST00000442216	ENTPD4	Q9Y227	616 aa		13.96	□□□□□ -0.17
CSNK1E-210	ENST00000442216	BSN	Q9UPA5	3926 aa		13.95	□□□□□ -0.18
CSNK1E-210	ENST00000442216	EML6	Q6ZMW3	1958 aa		13.95	□□□□□ -0.18
CSNK1E-210	ENST00000442216	SLITRK5	O94991	958 aa		13.95	□□□□□ -0.18
CSNK1E-210	ENST00000442216	PRPS2	P11908	318 aa		13.95	□□□□□ -0.18
CSNK1E-210	ENST00000442216	DDX5	P17844	614 aa	Known RBP	13.95	□□□□□ -0.18
CSNK1E-210	ENST00000442216	SDC1	P18827	310 aa		13.95	□□□□□ -0.18
CSNK1E-210	ENST00000442216	NT5E	P21589	574 aa		13.95	□□□□□ -0.18
CSNK1E-210	ENST00000442216	MPI	P34949	423 aa		13.95	□□□□□ -0.18
CSNK1E-210	ENST00000442216	SSR4	P51571	173 aa		13.95	□□□□□ -0.18
CSNK1E-210	ENST00000442216	MGAT2	Q10469	447 aa		13.95	□□□□□ -0.18
CSNK1E-210	ENST00000442216	OR1C1	Q15619	314 aa		13.95	□□□□□ -0.18
CSNK1E-210	ENST00000442216	INPP5J	Q15735	1006 aa	Predicted RBP	13.95	□□□□□ -0.18
CSNK1E-210	ENST00000442216	ZNF750	Q32MQ0	723 aa		13.95	□□□□□ -0.18
CSNK1E-210	ENST00000442216	C6orf136	Q5SQH8	315 aa		13.95	□□□□□ -0.18
CSNK1E-210	ENST00000442216	C9orf40	Q8IXQ3	194 aa		13.95	□□□□□ -0.18
CSNK1E-210	ENST00000442216	VWA5B2	Q8N398	1253 aa		13.95	□□□□□ -0.18
CSNK1E-210	ENST00000442216	TMEM156	Q8N614	296 aa		13.95	□□□□□ -0.18
CSNK1E-210	ENST00000442216	SLC15A4	Q8N697	577 aa		13.95	□□□□□ -0.18
CSNK1E-210	ENST00000442216	THAP3	Q8WTV1	239 aa	Predicted RBP	13.95	□□□□□ -0.18
CSNK1E-210	ENST00000442216	EXOSC8	Q96B26	276 aa	Known RBP	13.95	□□□□□ -0.18
CSNK1E-210	ENST00000442216	MTERF3	Q96E29	417 aa		13.95	□□□□□ -0.18
CSNK1E-210	ENST00000442216	SCMH1	Q96GD3	660 aa		13.95	□□□□□ -0.18
CSNK1E-210	ENST00000442216	BARD1	Q99728	777 aa	Known RBP	13.95	□□□□□ -0.18
CSNK1E-210	ENST00000442216	MAT2B	Q9NZL9	334 aa		13.95	□□□□□ -0.18
CSNK1E-210	ENST00000442216	LRFN1	Q9P244	771 aa		13.95	□□□□□ -0.18
CSNK1E-210	ENST00000442216	ZNF639	Q9UID6	485 aa		13.95	□□□□□ -0.18
CSNK1E-210	ENST00000442216	CFL2	Q9Y281	166 aa		13.95	□□□□□ -0.18
CSNK1E-210	ENST00000442216	EXPH5	Q8NEV8	1989 aa		13.94	□□□□□ -0.18
CSNK1E-210	ENST00000442216	ZNF462	Q96JM2	2506 aa		13.94	□□□□□ -0.18
CSNK1E-210	ENST00000442216	MYO1G	B0I1T2	1018 aa		13.94	□□□□□ -0.18
CSNK1E-210	ENST00000442216	SLCO1B7	G3V0H7	640 aa		13.94	□□□□□ -0.18
CSNK1E-210	ENST00000442216		J3QKU1	62 aa		13.94	□□□□□ -0.18
CSNK1E-210	ENST00000442216	HRK	O00198	91 aa		13.94	□□□□□ -0.18
CSNK1E-210	ENST00000442216	PEX11A	O75192	247 aa		13.94	□□□□□ -0.18
CSNK1E-210	ENST00000442216	VPS4B	O75351	444 aa		13.94	□□□□□ -0.18
CSNK1E-210	ENST00000442216	BCAS2	O75934	225 aa	Predicted RBP	13.94	□□□□□ -0.18
CSNK1E-210	ENST00000442216	SASH3	O75995	380 aa		13.94	□□□□□ -0.18
CSNK1E-210	ENST00000442216	OR2J2	O76002	312 aa		13.94	□□□□□ -0.18
CSNK1E-210	ENST00000442216	NEURL1	O76050	574 aa		13.94	□□□□□ -0.18
CSNK1E-210	ENST00000442216	F10	P00742	488 aa		13.94	□□□□□ -0.18
CSNK1E-210	ENST00000442216	CLPS	P04118	112 aa		13.94	□□□□□ -0.18
CSNK1E-210	ENST00000442216	IFI6	P09912	130 aa		13.94	□□□□□ -0.18
CSNK1E-210	ENST00000442216	CT62	P0C5K7	136 aa		13.94	□□□□□ -0.18
CSNK1E-210	ENST00000442216	BCKDHA	P12694	445 aa		13.94	□□□□□ -0.18
CSNK1E-210	ENST00000442216	CD46	P15529	392 aa		13.94	□□□□□ -0.18
CSNK1E-210	ENST00000442216	S1PR1	P21453	382 aa		13.94	□□□□□ -0.18
CSNK1E-210	ENST00000442216	TACR1	P25103	407 aa		13.94	□□□□□ -0.18
CSNK1E-210	ENST00000442216	RPL3	P39023	403 aa	Known RBP	13.94	□□□□□ -0.18
CSNK1E-210	ENST00000442216	MLLT10	P55197	1068 aa		13.94	□□□□□ -0.18
CSNK1E-210	ENST00000442216	OC90	Q02509	493 aa	Predicted RBP	13.94	□□□□□ -0.18
CSNK1E-210	ENST00000442216	EBP	Q15125	230 aa	Known RBP	13.94	□□□□□ -0.18
CSNK1E-210	ENST00000442216	PIGG	Q5H8A4	983 aa		13.94	□□□□□ -0.18
CSNK1E-210	ENST00000442216	ZNF766	Q5HY98	468 aa		13.94	□□□□□ -0.18
CSNK1E-210	ENST00000442216	COLEC12	Q5KU26	742 aa		13.94	□□□□□ -0.18
CSNK1E-210	ENST00000442216	R3HCC1L	Q7Z5L2	792 aa	Known RBP	13.94	□□□□□ -0.18
CSNK1E-210	ENST00000442216	TICAM1	Q8IUC6	712 aa		13.94	□□□□□ -0.18
CSNK1E-210	ENST00000442216	CCDC116	Q8IYX3	515 aa		13.94	□□□□□ -0.18
CSNK1E-210	ENST00000442216	ZNF615	Q8N8J6	731 aa		13.94	□□□□□ -0.18
CSNK1E-210	ENST00000442216	TMEM178A	Q8NBL3	297 aa		13.94	□□□□□ -0.18
CSNK1E-210	ENST00000442216	C17orf47	Q8NEP4	570 aa		13.94	□□□□□ -0.18
CSNK1E-210	ENST00000442216	CDC26	Q8NHZ8	85 aa		13.94	□□□□□ -0.18
CSNK1E-210	ENST00000442216	TP53INP1	Q96A56	240 aa		13.94	□□□□□ -0.18
CSNK1E-210	ENST00000442216	MIB2	Q96AX9	1013 aa		13.94	□□□□□ -0.18
CSNK1E-210	ENST00000442216	TUBGCP3	Q96CW5	907 aa		13.94	□□□□□ -0.18
CSNK1E-210	ENST00000442216	SNRNP40	Q96DI7	357 aa	Known RBP	13.94	□□□□□ -0.18
CSNK1E-210	ENST00000442216	EGLN2	Q96KS0	407 aa		13.94	□□□□□ -0.18
CSNK1E-210	ENST00000442216	SIGLEC12	Q96PQ1	595 aa		13.94	□□□□□ -0.18
CSNK1E-210	ENST00000442216	RASL10B	Q96S79	203 aa		13.94	□□□□□ -0.18
CSNK1E-210	ENST00000442216	BRINP2	Q9C0B6	783 aa		13.94	□□□□□ -0.18
CSNK1E-210	ENST00000442216	OR10A5	Q9H207	317 aa		13.94	□□□□□ -0.18
CSNK1E-210	ENST00000442216	REEP4	Q9H6H4	257 aa		13.94	□□□□□ -0.18
CSNK1E-210	ENST00000442216	ASIC5	Q9NY37	505 aa		13.94	□□□□□ -0.18
CSNK1E-210	ENST00000442216	LUZP4	Q9P127	313 aa		13.94	□□□□□ -0.18
CSNK1E-210	ENST00000442216	EXO1	Q9UQ84	846 aa	Known RBP	13.94	□□□□□ -0.18
CSNK1E-210	ENST00000442216	COPG1	Q9Y678	874 aa	Known RBP	13.94	□□□□□ -0.18
CSNK1E-210	ENST00000442216	ATP6AP2	A0A1C7CYW4	349 aa		13.93	□□□□□ -0.18
CSNK1E-210	ENST00000442216	WWP2	O00308	870 aa		13.93	□□□□□ -0.18
CSNK1E-210	ENST00000442216	ATP6AP2	O75787	350 aa		13.93	□□□□□ -0.18
CSNK1E-210	ENST00000442216	SP1	P08047	785 aa		13.93	□□□□□ -0.18

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