RNA–Protein interactions for RNA: ENST00000442010.2

HMGB3P22-201, Transcript of high mobility group box 3 pseudogene 22, humanhuman

TSL 2 BASIC

Gene HMGB3P22, Length 597 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-201ENST00000442010 SOX18P35713 384 aa17.45■□□□□ 0.38
HMGB3P22-201ENST00000442010 XKP51811 444 aa17.45■□□□□ 0.38
HMGB3P22-201ENST00000442010 PPIAP62937 165 aaKnown RBP17.45■□□□□ 0.38
HMGB3P22-201ENST00000442010 CDSNQ15517 529 aa17.45■□□□□ 0.38
HMGB3P22-201ENST00000442010 SLC48A1Q6P1K1 146 aa17.45■□□□□ 0.38
HMGB3P22-201ENST00000442010 XKRXQ6PP77 449 aa17.45■□□□□ 0.38
HMGB3P22-201ENST00000442010 RGS9BPQ6ZS82 235 aa17.45■□□□□ 0.38
HMGB3P22-201ENST00000442010 GPRIN3Q6ZVF9 776 aa17.45■□□□□ 0.38
HMGB3P22-201ENST00000442010 NCCRP1Q6ZVX7 275 aaPredicted RBP17.45■□□□□ 0.38
HMGB3P22-201ENST00000442010 SLC29A4Q7RTT9 530 aa17.45■□□□□ 0.38
HMGB3P22-201ENST00000442010 MMP21Q8N119 569 aa17.45■□□□□ 0.38
HMGB3P22-201ENST00000442010 C1orf52Q8N6N3 182 aaKnown RBP17.45■□□□□ 0.38
HMGB3P22-201ENST00000442010 ZNF615Q8N8J6 731 aa17.45■□□□□ 0.38
HMGB3P22-201ENST00000442010 PAQR8Q8TEZ7 354 aa17.45■□□□□ 0.38
HMGB3P22-201ENST00000442010 CHTF18Q8WVB6 975 aa17.45■□□□□ 0.38
HMGB3P22-201ENST00000442010 VKORC1Q9BQB6 163 aa17.45■□□□□ 0.38
HMGB3P22-201ENST00000442010 DEFB127Q9H1M4 99 aa17.45■□□□□ 0.38
HMGB3P22-201ENST00000442010 GSTO2Q9H4Y5 243 aa17.45■□□□□ 0.38
HMGB3P22-201ENST00000442010 PROK2Q9HC23 129 aa17.45■□□□□ 0.38
HMGB3P22-201ENST00000442010 VPS29Q9UBQ0 182 aa17.45■□□□□ 0.38
HMGB3P22-201ENST00000442010 CDC40O60508 579 aaKnown RBP eCLIP17.44■□□□□ 0.38
HMGB3P22-201ENST00000442010 KRT6AP02538 564 aa17.44■□□□□ 0.38
HMGB3P22-201ENST00000442010 KRT6BP04259 564 aa17.44■□□□□ 0.38
HMGB3P22-201ENST00000442010 FBXO45P0C2W1 286 aa17.44■□□□□ 0.38
HMGB3P22-201ENST00000442010 S1PR1P21453 382 aa17.44■□□□□ 0.38
HMGB3P22-201ENST00000442010 KRT6CP48668 564 aa17.44■□□□□ 0.38
HMGB3P22-201ENST00000442010 DNASE1L1P49184 302 aa17.44■□□□□ 0.38
HMGB3P22-201ENST00000442010 MGAT2Q10469 447 aa17.44■□□□□ 0.38
HMGB3P22-201ENST00000442010 CSTF3Q12996 717 aaKnown RBP17.44■□□□□ 0.38
HMGB3P22-201ENST00000442010 ZNF630Q2M218 657 aaPredicted RBP17.44■□□□□ 0.38
HMGB3P22-201ENST00000442010 GK5Q6ZS86 529 aa17.44■□□□□ 0.38
HMGB3P22-201ENST00000442010 FAM47EQ6ZV65 393 aa17.44■□□□□ 0.38
HMGB3P22-201ENST00000442010 SLC22A16Q86VW1 577 aa17.44■□□□□ 0.38
HMGB3P22-201ENST00000442010 TDRPQ86YL5 185 aa17.44■□□□□ 0.38
HMGB3P22-201ENST00000442010 GALNT12Q8IXK2 581 aa17.44■□□□□ 0.38
HMGB3P22-201ENST00000442010 DND1Q8IYX4 353 aaKnown RBP17.44■□□□□ 0.38
HMGB3P22-201ENST00000442010 ADIPOR1Q96A54 375 aa17.44■□□□□ 0.38
HMGB3P22-201ENST00000442010 GAL3ST4Q96RP7 486 aa17.44■□□□□ 0.38
HMGB3P22-201ENST00000442010 IL1RL2Q9HB29 575 aa17.44■□□□□ 0.38
HMGB3P22-201ENST00000442010 NMRK1Q9NWW6 199 aa17.44■□□□□ 0.38
HMGB3P22-201ENST00000442010 TUBA8Q9NY65 449 aaPredicted RBP17.44■□□□□ 0.38
HMGB3P22-201ENST00000442010 CHCHD2Q9Y6H1 151 aaPredicted RBP17.44■□□□□ 0.38
HMGB3P22-201ENST00000442010 ARHGAP21Q5T5U3 1957 aa17.44■□□□□ 0.38
HMGB3P22-201ENST00000442010 HCFC1P51610 2035 aa17.43■□□□□ 0.38
HMGB3P22-201ENST00000442010 FAM166BA8MTA8 275 aa17.43■□□□□ 0.38
HMGB3P22-201ENST00000442010 ACOT7O00154 380 aa17.43■□□□□ 0.38
HMGB3P22-201ENST00000442010 GLRA3O75311 464 aa17.43■□□□□ 0.38
HMGB3P22-201ENST00000442010 GUCY1B2O75343 617 aa17.43■□□□□ 0.38
HMGB3P22-201ENST00000442010 PDE9AO76083 593 aa17.43■□□□□ 0.38
HMGB3P22-201ENST00000442010 IGHG3P01860 377 aa17.43■□□□□ 0.38
HMGB3P22-201ENST00000442010 P04436 131 aa17.43■□□□□ 0.38
HMGB3P22-201ENST00000442010 PORP16435 677 aaPredicted RBP17.43■□□□□ 0.38
HMGB3P22-201ENST00000442010 PIGAP37287 484 aa17.43■□□□□ 0.38
HMGB3P22-201ENST00000442010 HTR6P50406 440 aa17.43■□□□□ 0.38
HMGB3P22-201ENST00000442010 PKNOX1P55347 436 aa17.43■□□□□ 0.38
HMGB3P22-201ENST00000442010 TRA2BP62995 288 aaKnown RBP17.43■□□□□ 0.38
HMGB3P22-201ENST00000442010 RAE1P78406 368 aaKnown RBP17.43■□□□□ 0.38
HMGB3P22-201ENST00000442010 PLGLB1Q02325 96 aa17.43■□□□□ 0.38
HMGB3P22-201ENST00000442010 LCP2Q13094 533 aa17.43■□□□□ 0.38
HMGB3P22-201ENST00000442010 NTRK2Q16620 822 aa17.43■□□□□ 0.38
HMGB3P22-201ENST00000442010 EMC4Q5J8M3 183 aa17.43■□□□□ 0.38
HMGB3P22-201ENST00000442010 SLC22A10Q63ZE4 541 aa17.43■□□□□ 0.38
HMGB3P22-201ENST00000442010 ARHGAP11AQ6P4F7 1023 aa17.43■□□□□ 0.38
HMGB3P22-201ENST00000442010 C3P1Q6ZMU1 363 aa17.43■□□□□ 0.38
HMGB3P22-201ENST00000442010 CD163Q86VB7 1156 aa17.43■□□□□ 0.38
HMGB3P22-201ENST00000442010 TMEM251Q8N6I4 163 aa17.43■□□□□ 0.38
HMGB3P22-201ENST00000442010 METTL6Q8TCB7 284 aa17.43■□□□□ 0.38
HMGB3P22-201ENST00000442010 TP53INP1Q96A56 240 aa17.43■□□□□ 0.38
HMGB3P22-201ENST00000442010 C11orf24Q96F05 449 aaPredicted RBP17.43■□□□□ 0.38
HMGB3P22-201ENST00000442010 ACPTQ9BZG2 426 aa17.43■□□□□ 0.38
HMGB3P22-201ENST00000442010 OR10A5Q9H207 317 aa17.43■□□□□ 0.38
HMGB3P22-201ENST00000442010 STK38LQ9Y2H1 464 aa17.43■□□□□ 0.38
HMGB3P22-201ENST00000442010 A0A1B0GVC2 190 aa17.42■□□□□ 0.38
HMGB3P22-201ENST00000442010 C2orf92A0A1B0GVN3 265 aa17.42■□□□□ 0.38
HMGB3P22-201ENST00000442010 SERTM1A2A2V5 107 aa17.42■□□□□ 0.38
HMGB3P22-201ENST00000442010 UBFD1O14562 309 aaKnown RBP17.42■□□□□ 0.38
HMGB3P22-201ENST00000442010 ULK1O75385 1050 aa17.42■□□□□ 0.38
HMGB3P22-201ENST00000442010 ESRRBO95718 433 aa17.42■□□□□ 0.38
HMGB3P22-201ENST00000442010 PROCP04070 461 aa17.42■□□□□ 0.38
HMGB3P22-201ENST00000442010 ATP1B1P05026 303 aa17.42■□□□□ 0.38
HMGB3P22-201ENST00000442010 ENO1P06733 434 aaKnown RBP17.42■□□□□ 0.38
HMGB3P22-201ENST00000442010 SERPINB3P29508 390 aa17.42■□□□□ 0.38
HMGB3P22-201ENST00000442010 MAGEA5P43359 124 aa17.42■□□□□ 0.38
HMGB3P22-201ENST00000442010 SMSP52788 366 aa17.42■□□□□ 0.38
HMGB3P22-201ENST00000442010 DUSP2Q05923 314 aa17.42■□□□□ 0.38
HMGB3P22-201ENST00000442010 PRICKLE4Q2TBC4 344 aa17.42■□□□□ 0.38
HMGB3P22-201ENST00000442010 ZYG11AQ6WRX3 759 aa17.42■□□□□ 0.38
HMGB3P22-201ENST00000442010 TICAM1Q8IUC6 712 aa17.42■□□□□ 0.38
HMGB3P22-201ENST00000442010 FBXW8Q8N3Y1 598 aa17.42■□□□□ 0.38
HMGB3P22-201ENST00000442010 FAM109AQ8N4B1 249 aa17.42■□□□□ 0.38
HMGB3P22-201ENST00000442010 MARVELD2Q8N4S9 558 aa17.42■□□□□ 0.38
HMGB3P22-201ENST00000442010 OR7G1Q8NGA0 311 aa17.42■□□□□ 0.38
HMGB3P22-201ENST00000442010 OR10G3Q8NGC4 313 aa17.42■□□□□ 0.38
HMGB3P22-201ENST00000442010 UBLCP1Q8WVY7 318 aaPredicted RBP17.42■□□□□ 0.38
HMGB3P22-201ENST00000442010 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.42■□□□□ 0.38
HMGB3P22-201ENST00000442010 ZNF681Q96N22 645 aa17.42■□□□□ 0.38
HMGB3P22-201ENST00000442010 KCNA7Q96RP8 456 aa17.42■□□□□ 0.38
HMGB3P22-201ENST00000442010 PPCSQ9HAB8 311 aa17.42■□□□□ 0.38
HMGB3P22-201ENST00000442010 HEY2Q9UBP5 337 aa17.42■□□□□ 0.38
HMGB3P22-201ENST00000442010 ZNF639Q9UID6 485 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms