RNA–Protein interactions for RNA: ENST00000441580.5

CPSF4-206, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2 BASIC

Gene CPSF4, Length 942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-206ENST00000441580 NTMQ9P121 344 aa12.41□□□□□ -0.42
CPSF4-206ENST00000441580 PTGFRNQ9P2B2 879 aa12.41□□□□□ -0.42
CPSF4-206ENST00000441580 SEC14L3Q9UDX4 400 aa12.41□□□□□ -0.42
CPSF4-206ENST00000441580 KCND3Q9UK17 655 aa12.41□□□□□ -0.42
CPSF4-206ENST00000441580 SLC9A8Q9Y2E8 581 aa12.41□□□□□ -0.42
CPSF4-206ENST00000441580 POFUT2Q9Y2G5 429 aa12.41□□□□□ -0.42
CPSF4-206ENST00000441580 TESMINQ9Y4I5 508 aa12.41□□□□□ -0.42
CPSF4-206ENST00000441580 SLCO1B1Q9Y6L6 691 aa12.41□□□□□ -0.42
CPSF4-206ENST00000441580 ARHGEF17Q96PE2 2063 aaPredicted RBP12.41□□□□□ -0.42
CPSF4-206ENST00000441580 DUXAA6NLW8 204 aa12.4□□□□□ -0.42
CPSF4-206ENST00000441580 LMO7DNF2Z398 122 aa12.4□□□□□ -0.42
CPSF4-206ENST00000441580 AQP9O43315 295 aa12.4□□□□□ -0.42
CPSF4-206ENST00000441580 GALR3O60755 368 aaPredicted RBP12.4□□□□□ -0.42
CPSF4-206ENST00000441580 PRAMEF10O60809 474 aa12.4□□□□□ -0.42
CPSF4-206ENST00000441580 PROS1P07225 676 aa12.4□□□□□ -0.42
CPSF4-206ENST00000441580 FEN1P39748 380 aaKnown RBP12.4□□□□□ -0.42
CPSF4-206ENST00000441580 DAPP51397 102 aa12.4□□□□□ -0.42
CPSF4-206ENST00000441580 CDH12P55289 794 aa12.4□□□□□ -0.42
CPSF4-206ENST00000441580 C21orf59P57076 290 aa12.4□□□□□ -0.42
CPSF4-206ENST00000441580 RAB38P57729 211 aa12.4□□□□□ -0.42
CPSF4-206ENST00000441580 SMIM11AP58511 58 aa12.4□□□□□ -0.42
CPSF4-206ENST00000441580 LASP1Q14847 261 aaKnown RBP12.4□□□□□ -0.42
CPSF4-206ENST00000441580 NDUFA9Q16795 377 aa12.4□□□□□ -0.42
CPSF4-206ENST00000441580 ZNF773Q6PK81 442 aa12.4□□□□□ -0.42
CPSF4-206ENST00000441580 USP53Q70EK8 1073 aa12.4□□□□□ -0.42
CPSF4-206ENST00000441580 C17orf82Q86X59 251 aaPredicted RBP12.4□□□□□ -0.42
CPSF4-206ENST00000441580 SLC44A2Q8IWA5 706 aaPredicted RBP12.4□□□□□ -0.42
CPSF4-206ENST00000441580 CCDC116Q8IYX3 515 aa12.4□□□□□ -0.42
CPSF4-206ENST00000441580 CARFQ8N187 725 aa12.4□□□□□ -0.42
CPSF4-206ENST00000441580 ARL14Q8N4G2 192 aa12.4□□□□□ -0.42
CPSF4-206ENST00000441580 SMYD1Q8NB12 490 aa12.4□□□□□ -0.42
CPSF4-206ENST00000441580 NUP43Q8NFH3 380 aa12.4□□□□□ -0.42
CPSF4-206ENST00000441580 ADAMTS16Q8TE57 1224 aa12.4□□□□□ -0.42
CPSF4-206ENST00000441580 PHF10Q8WUB8 498 aaKnown RBP12.4□□□□□ -0.42
CPSF4-206ENST00000441580 FBLIM1Q8WUP2 373 aa12.4□□□□□ -0.42
CPSF4-206ENST00000441580 APOBEC4Q8WW27 367 aaKnown RBP12.4□□□□□ -0.42
CPSF4-206ENST00000441580 UCN3Q969E3 161 aa12.4□□□□□ -0.42
CPSF4-206ENST00000441580 FKBP10Q96AY3 582 aa12.4□□□□□ -0.42
CPSF4-206ENST00000441580 ELP4Q96EB1 424 aa12.4□□□□□ -0.42
CPSF4-206ENST00000441580 COL21A1Q96P44 957 aa12.4□□□□□ -0.42
CPSF4-206ENST00000441580 TSC22D3Q99576 134 aa12.4□□□□□ -0.42
CPSF4-206ENST00000441580 SLC38A3Q99624 504 aa12.4□□□□□ -0.42
CPSF4-206ENST00000441580 ACTRT3Q9BYD9 372 aa12.4□□□□□ -0.42
CPSF4-206ENST00000441580 YIPF3Q9GZM5 350 aa12.4□□□□□ -0.42
CPSF4-206ENST00000441580 CHRNA10Q9GZZ6 450 aa12.4□□□□□ -0.42
CPSF4-206ENST00000441580 MIR1-1HGQ9H1L0 117 aa12.4□□□□□ -0.42
CPSF4-206ENST00000441580 ANKHQ9HCJ1 492 aa12.4□□□□□ -0.42
CPSF4-206ENST00000441580 PAPOLBQ9NRJ5 636 aaKnown RBP12.4□□□□□ -0.42
CPSF4-206ENST00000441580 KCMF1Q9P0J7 381 aa12.4□□□□□ -0.42
CPSF4-206ENST00000441580 LOC105369274A0A096LPK9 316 aa12.39□□□□□ -0.43
CPSF4-206ENST00000441580 LOC102723532A0A0G2JNH3 316 aa12.39□□□□□ -0.43
CPSF4-206ENST00000441580 A0A0G2JPF8 293 aa12.39□□□□□ -0.43
CPSF4-206ENST00000441580 A0A1B0GTW7 788 aa12.39□□□□□ -0.43
CPSF4-206ENST00000441580 TLCD2A6NGC4 264 aa12.39□□□□□ -0.43
CPSF4-206ENST00000441580 HNRNPCL2B2RXH8 293 aa12.39□□□□□ -0.43
CPSF4-206ENST00000441580 HNRNPCL3B7ZW38 293 aa12.39□□□□□ -0.43
CPSF4-206ENST00000441580 SYT5O00445 386 aa12.39□□□□□ -0.43
CPSF4-206ENST00000441580 CCNB2O95067 398 aa12.39□□□□□ -0.43
CPSF4-206ENST00000441580 GADD45GO95257 159 aa12.39□□□□□ -0.43
CPSF4-206ENST00000441580 OXSR1O95747 527 aaPredicted RBP12.39□□□□□ -0.43
CPSF4-206ENST00000441580 EIF2S1P05198 315 aaKnown RBP12.39□□□□□ -0.43
CPSF4-206ENST00000441580 HMGN2P05204 90 aaKnown RBP12.39□□□□□ -0.43
CPSF4-206ENST00000441580 FESP07332 822 aa12.39□□□□□ -0.43
CPSF4-206ENST00000441580 CCDC159P0C7I6 412 aa12.39□□□□□ -0.43
CPSF4-206ENST00000441580 HNRNPCL4P0DMR1 293 aa12.39□□□□□ -0.43
CPSF4-206ENST00000441580 CPMP14384 443 aa12.39□□□□□ -0.43
CPSF4-206ENST00000441580 ST6GAL1P15907 406 aa12.39□□□□□ -0.43
CPSF4-206ENST00000441580 PRKACGP22612 351 aa12.39□□□□□ -0.43
CPSF4-206ENST00000441580 CXCL12P48061 93 aa12.39□□□□□ -0.43
CPSF4-206ENST00000441580 KCNJ5P48544 419 aa12.39□□□□□ -0.43
CPSF4-206ENST00000441580 PXNP49023 591 aaPredicted RBP12.39□□□□□ -0.43
CPSF4-206ENST00000441580 DUSP2Q05923 314 aa12.39□□□□□ -0.43
CPSF4-206ENST00000441580 PPP1R8Q12972 351 aaKnown RBP12.39□□□□□ -0.43
CPSF4-206ENST00000441580 MAPK11Q15759 364 aa12.39□□□□□ -0.43
CPSF4-206ENST00000441580 GPR19Q15760 415 aa12.39□□□□□ -0.43
CPSF4-206ENST00000441580 MICAQ29983 383 aa12.39□□□□□ -0.43
CPSF4-206ENST00000441580 C14orf28Q4W4Y0 310 aa12.39□□□□□ -0.43
CPSF4-206ENST00000441580 COLEC12Q5KU26 742 aa12.39□□□□□ -0.43
CPSF4-206ENST00000441580 BROXQ5VW32 411 aa12.39□□□□□ -0.43
CPSF4-206ENST00000441580 TSEN54Q7Z6J9 526 aaKnown RBP12.39□□□□□ -0.43
CPSF4-206ENST00000441580 ZNF761Q86XN6 746 aaPredicted RBP12.39□□□□□ -0.43
CPSF4-206ENST00000441580 ALDH16A1Q8IZ83 802 aa12.39□□□□□ -0.43
CPSF4-206ENST00000441580 OR4N4Q8N0Y3 316 aa12.39□□□□□ -0.43
CPSF4-206ENST00000441580 OR2L13Q8N349 312 aa12.39□□□□□ -0.43
CPSF4-206ENST00000441580 TTC29Q8NA56 475 aaPredicted RBP12.39□□□□□ -0.43
CPSF4-206ENST00000441580 CHDHQ8NE62 594 aaPredicted RBP12.39□□□□□ -0.43
CPSF4-206ENST00000441580 OR5D16Q8NGK9 328 aa12.39□□□□□ -0.43
CPSF4-206ENST00000441580 TANKQ92844 425 aa12.39□□□□□ -0.43
CPSF4-206ENST00000441580 TCTN2Q96GX1 697 aa12.39□□□□□ -0.43
CPSF4-206ENST00000441580 MAGED4Q96JG8 741 aa12.39□□□□□ -0.43
CPSF4-206ENST00000441580 DHRS1Q96LJ7 313 aa12.39□□□□□ -0.43
CPSF4-206ENST00000441580 GUCD1Q96NT3 240 aa12.39□□□□□ -0.43
CPSF4-206ENST00000441580 TRNT1Q96Q11 434 aaKnown RBP12.39□□□□□ -0.43
CPSF4-206ENST00000441580 OR7D2Q96RA2 312 aa12.39□□□□□ -0.43
CPSF4-206ENST00000441580 CSF3RQ99062 836 aa12.39□□□□□ -0.43
CPSF4-206ENST00000441580 PINK1Q9BXM7 581 aa12.39□□□□□ -0.43
CPSF4-206ENST00000441580 KLHL25Q9H0H3 589 aa12.39□□□□□ -0.43
CPSF4-206ENST00000441580 RBM38Q9H0Z9 239 aaKnown RBP12.39□□□□□ -0.43
CPSF4-206ENST00000441580 ZNF556Q9HAH1 456 aa12.39□□□□□ -0.43
CPSF4-206ENST00000441580 EPHA6Q9UF33 1036 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms