RNA–Protein interactions for RNA: ENST00000441542.6

HDAC9-214, Transcript of histone deacetylase 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HDAC9, Length 3,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-214ENST00000441542 ACSM2AQ08AH3 577 aa7.16□□□□□ -1.26
HDAC9-214ENST00000441542 SCARB2Q14108 478 aa7.16□□□□□ -1.26
HDAC9-214ENST00000441542 HEPACAMQ14CZ8 416 aa7.16□□□□□ -1.26
HDAC9-214ENST00000441542 SF3A2Q15428 464 aaKnown RBP7.16□□□□□ -1.26
HDAC9-214ENST00000441542 ACSM2BQ68CK6 577 aa7.16□□□□□ -1.26
HDAC9-214ENST00000441542 RAET1GQ6H3X3 334 aa7.16□□□□□ -1.26
HDAC9-214ENST00000441542 LYPD4Q6UWN0 246 aa7.16□□□□□ -1.26
HDAC9-214ENST00000441542 ZNF730Q6ZMV8 503 aa7.16□□□□□ -1.26
HDAC9-214ENST00000441542 SERPINA9Q86WD7 417 aa7.16□□□□□ -1.26
HDAC9-214ENST00000441542 GPR135Q8IZ08 494 aa7.16□□□□□ -1.26
HDAC9-214ENST00000441542 TOP6BLQ8N6T0 577 aa7.16□□□□□ -1.26
HDAC9-214ENST00000441542 RELL2Q8NC24 303 aaPredicted RBP7.16□□□□□ -1.26
HDAC9-214ENST00000441542 MED8Q96G25 268 aa7.16□□□□□ -1.26
HDAC9-214ENST00000441542 ZSWIM3Q96MP5 696 aa7.16□□□□□ -1.26
HDAC9-214ENST00000441542 TMEM175Q9BSA9 504 aa7.16□□□□□ -1.26
HDAC9-214ENST00000441542 POLR2J3Q9H1A7 115 aaKnown RBP7.16□□□□□ -1.26
HDAC9-214ENST00000441542 ASB8Q9H765 288 aa7.16□□□□□ -1.26
HDAC9-214ENST00000441542 ATP13A1Q9HD20 1204 aa7.16□□□□□ -1.26
HDAC9-214ENST00000441542 PRDM9Q9NQV7 894 aa7.16□□□□□ -1.26
HDAC9-214ENST00000441542 NFKBIL1Q9UBC1 381 aaPredicted RBP7.16□□□□□ -1.26
HDAC9-214ENST00000441542 MGAT4DA6NG13 374 aa7.16□□□□□ -1.26
HDAC9-214ENST00000441542 MID1O15344 667 aa7.16□□□□□ -1.26
HDAC9-214ENST00000441542 INPPL1O15357 1258 aa7.16□□□□□ -1.26
HDAC9-214ENST00000441542 PROM1O43490 865 aa7.16□□□□□ -1.26
HDAC9-214ENST00000441542 PRKYO43930 277 aa7.16□□□□□ -1.26
HDAC9-214ENST00000441542 MMP20O60882 483 aa7.16□□□□□ -1.26
HDAC9-214ENST00000441542 LPLP06858 475 aa7.16□□□□□ -1.26
HDAC9-214ENST00000441542 PBX3P40426 434 aa7.16□□□□□ -1.26
HDAC9-214ENST00000441542 BDKRB1P46663 353 aa7.16□□□□□ -1.26
HDAC9-214ENST00000441542 CAPZA2P47755 286 aa7.16□□□□□ -1.26
HDAC9-214ENST00000441542 STK19P49842 368 aaPredicted RBP7.16□□□□□ -1.26
HDAC9-214ENST00000441542 SELENOPP49908 381 aa7.16□□□□□ -1.26
HDAC9-214ENST00000441542 PPP3R1P63098 170 aa7.16□□□□□ -1.26
HDAC9-214ENST00000441542 HTRA3P83110 453 aa7.16□□□□□ -1.26
HDAC9-214ENST00000441542 MC1RQ01726 317 aa7.16□□□□□ -1.26
HDAC9-214ENST00000441542 PCDH1Q08174 1060 aa7.16□□□□□ -1.26
HDAC9-214ENST00000441542 ADAM15Q13444 863 aa7.16□□□□□ -1.26
HDAC9-214ENST00000441542 OPCMLQ14982 345 aa7.16□□□□□ -1.26
HDAC9-214ENST00000441542 MS4A13Q5J8X5 152 aa7.16□□□□□ -1.26
HDAC9-214ENST00000441542 LRIF1Q5T3J3 769 aa7.16□□□□□ -1.26
HDAC9-214ENST00000441542 CPTPQ5TA50 214 aa7.16□□□□□ -1.26
HDAC9-214ENST00000441542 ALG1LQ6GMV1 187 aa7.16□□□□□ -1.26
HDAC9-214ENST00000441542 TMEM91Q6ZNR0 172 aa7.16□□□□□ -1.26
HDAC9-214ENST00000441542 NLRC3Q7RTR2 1065 aa7.16□□□□□ -1.26
HDAC9-214ENST00000441542 DNAJB7Q7Z6W7 309 aaPredicted RBP7.16□□□□□ -1.26
HDAC9-214ENST00000441542 SCD5Q86SK9 330 aa7.16□□□□□ -1.26
HDAC9-214ENST00000441542 SYT9Q86SS6 491 aa7.16□□□□□ -1.26
HDAC9-214ENST00000441542 SERPINA11Q86U17 422 aa7.16□□□□□ -1.26
HDAC9-214ENST00000441542 GPAT4Q86UL3 456 aa7.16□□□□□ -1.26
HDAC9-214ENST00000441542 CCDC117Q8IWD4 279 aaPredicted RBP7.16□□□□□ -1.26
HDAC9-214ENST00000441542 RAB8BQ92930 207 aa7.16□□□□□ -1.26
HDAC9-214ENST00000441542 RFT1Q96AA3 541 aa7.16□□□□□ -1.26
HDAC9-214ENST00000441542 WDFY2Q96P53 400 aa7.16□□□□□ -1.26
HDAC9-214ENST00000441542 CACNG6Q9BXT2 260 aa7.16□□□□□ -1.26
HDAC9-214ENST00000441542 ARHGAP39Q9C0H5 1083 aa7.16□□□□□ -1.26
HDAC9-214ENST00000441542 ELAC1Q9H777 363 aaKnown RBP7.16□□□□□ -1.26
HDAC9-214ENST00000441542 IFT22Q9H7X7 185 aa7.16□□□□□ -1.26
HDAC9-214ENST00000441542 FOLH1BQ9HBA9 442 aa7.16□□□□□ -1.26
HDAC9-214ENST00000441542 POPDC3Q9HBV1 291 aa7.16□□□□□ -1.26
HDAC9-214ENST00000441542 NLE1Q9NVX2 485 aaPredicted RBP7.16□□□□□ -1.26
HDAC9-214ENST00000441542 CRLS1Q9UJA2 301 aa7.16□□□□□ -1.26
HDAC9-214ENST00000441542 A0A0C4DFX4 3053 aa7.15□□□□□ -1.26
HDAC9-214ENST00000441542 L7N2F9 121 aa7.15□□□□□ -1.26
HDAC9-214ENST00000441542 MTX2O75431 263 aa7.15□□□□□ -1.26
HDAC9-214ENST00000441542 OR5F1O95221 314 aa7.15□□□□□ -1.26
HDAC9-214ENST00000441542 C6orf47O95873 294 aa7.15□□□□□ -1.26
HDAC9-214ENST00000441542 SCGB1D2O95969 90 aa7.15□□□□□ -1.26
HDAC9-214ENST00000441542 IL1AP01583 271 aa7.15□□□□□ -1.26
HDAC9-214ENST00000441542 PTGER1P34995 402 aa7.15□□□□□ -1.26
HDAC9-214ENST00000441542 MAPKAPK2P49137 400 aa7.15□□□□□ -1.26
HDAC9-214ENST00000441542 RPIAP49247 311 aa7.15□□□□□ -1.26
HDAC9-214ENST00000441542 ZNF140P52738 457 aaPredicted RBP7.15□□□□□ -1.26
HDAC9-214ENST00000441542 RPS24P62847 133 aaKnown RBP7.15□□□□□ -1.26
HDAC9-214ENST00000441542 SELENOWP63302 87 aa7.15□□□□□ -1.26
HDAC9-214ENST00000441542 CHIT1Q13231 466 aa7.15□□□□□ -1.26
HDAC9-214ENST00000441542 RGNQ15493 299 aa7.15□□□□□ -1.26
HDAC9-214ENST00000441542 TEAD4Q15561 434 aa7.15□□□□□ -1.26
HDAC9-214ENST00000441542 COL28A1Q2UY09 1125 aa7.15□□□□□ -1.26
HDAC9-214ENST00000441542 LRRC73Q5JTD7 316 aa7.15□□□□□ -1.26
HDAC9-214ENST00000441542 FAM26DQ5JW98 314 aa7.15□□□□□ -1.26
HDAC9-214ENST00000441542 FAM209BQ5JX69 171 aa7.15□□□□□ -1.26
HDAC9-214ENST00000441542 CLLU1Q5K131 121 aa7.15□□□□□ -1.26
HDAC9-214ENST00000441542 MZT2AQ6P582 158 aa7.15□□□□□ -1.26
HDAC9-214ENST00000441542 LBX2Q6XYB7 198 aa7.15□□□□□ -1.26
HDAC9-214ENST00000441542 PRSS45Q7RTY3 260 aa7.15□□□□□ -1.26
HDAC9-214ENST00000441542 TECPR1Q7Z6L1 1165 aa7.15□□□□□ -1.26
HDAC9-214ENST00000441542 C1orf52Q8N6N3 182 aaKnown RBP7.15□□□□□ -1.26
HDAC9-214ENST00000441542 BMPERQ8N8U9 685 aa7.15□□□□□ -1.26
HDAC9-214ENST00000441542 ANKRD53Q8N9V6 530 aa7.15□□□□□ -1.26
HDAC9-214ENST00000441542 BBS10Q8TAM1 723 aa7.15□□□□□ -1.26
HDAC9-214ENST00000441542 KAT2AQ92830 837 aa7.15□□□□□ -1.26
HDAC9-214ENST00000441542 UFD1Q92890 307 aa7.15□□□□□ -1.26
HDAC9-214ENST00000441542 FOXJ1Q92949 421 aa7.15□□□□□ -1.26
HDAC9-214ENST00000441542 WNT2BQ93097 391 aa7.15□□□□□ -1.26
HDAC9-214ENST00000441542 CIDECQ96AQ7 238 aaPredicted RBP7.15□□□□□ -1.26
HDAC9-214ENST00000441542 SGK3Q96BR1 496 aa7.15□□□□□ -1.26
HDAC9-214ENST00000441542 SORCS2Q96PQ0 1159 aa7.15□□□□□ -1.26
HDAC9-214ENST00000441542 OR10A4Q9H209 315 aa7.15□□□□□ -1.26
HDAC9-214ENST00000441542 IMP3Q9NV31 184 aaKnown RBP7.15□□□□□ -1.26
HDAC9-214ENST00000441542 NDUFB11Q9NX14 153 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms