RNA–Protein interactions for RNA: ENST00000439886.5

SMPD4-209, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,371 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-209ENST00000439886 B4GALT3O60512 393 aa11.13□□□□□ -0.63
SMPD4-209ENST00000439886 GNRH1P01148 92 aa11.13□□□□□ -0.63
SMPD4-209ENST00000439886 BCHEP06276 602 aa11.13□□□□□ -0.63
SMPD4-209ENST00000439886 RNF224P0DH78 156 aa11.13□□□□□ -0.63
SMPD4-209ENST00000439886 KCNJ5P48544 419 aa11.13□□□□□ -0.63
SMPD4-209ENST00000439886 HBA1P69905 142 aa11.13□□□□□ -0.63
SMPD4-209ENST00000439886 MRPS6P82932 125 aaKnown RBP11.13□□□□□ -0.63
SMPD4-209ENST00000439886 TUSC3Q13454 348 aa11.13□□□□□ -0.63
SMPD4-209ENST00000439886 GINS1Q14691 196 aa11.13□□□□□ -0.63
SMPD4-209ENST00000439886 ANGPT1Q15389 498 aa11.13□□□□□ -0.63
SMPD4-209ENST00000439886 ZNF792Q3KQV3 632 aa11.13□□□□□ -0.63
SMPD4-209ENST00000439886 RFLNAQ6ZTI6 216 aa11.13□□□□□ -0.63
SMPD4-209ENST00000439886 HDDC2Q7Z4H3 204 aa11.13□□□□□ -0.63
SMPD4-209ENST00000439886 WDR53Q7Z5U6 358 aaPredicted RBP11.13□□□□□ -0.63
SMPD4-209ENST00000439886 ZNF280BQ86YH2 543 aa11.13□□□□□ -0.63
SMPD4-209ENST00000439886 RBM45Q8IUH3 476 aaKnown RBP11.13□□□□□ -0.63
SMPD4-209ENST00000439886 NEIL3Q8TAT5 605 aa11.13□□□□□ -0.63
SMPD4-209ENST00000439886 GEMIN6Q8WXD5 167 aaKnown RBP11.13□□□□□ -0.63
SMPD4-209ENST00000439886 TM9SF4Q92544 642 aa11.13□□□□□ -0.63
SMPD4-209ENST00000439886 POP5Q969H6 163 aaKnown RBP11.13□□□□□ -0.63
SMPD4-209ENST00000439886 SIGLEC11Q96RL6 698 aa11.13□□□□□ -0.63
SMPD4-209ENST00000439886 IL26Q9NPH9 171 aa11.13□□□□□ -0.63
SMPD4-209ENST00000439886 ENAMQ9NRM1 1142 aa11.13□□□□□ -0.63
SMPD4-209ENST00000439886 KLHL21Q9UJP4 597 aa11.13□□□□□ -0.63
SMPD4-209ENST00000439886 PADI3Q9ULW8 664 aa11.13□□□□□ -0.63
SMPD4-209ENST00000439886 BAIAP2Q9UQB8 552 aa11.13□□□□□ -0.63
SMPD4-209ENST00000439886 RUVBL1Q9Y265 456 aaKnown RBP11.13□□□□□ -0.63
SMPD4-209ENST00000439886 NYNRINQ9P2P1 1898 aaKnown RBP11.13□□□□□ -0.63
SMPD4-209ENST00000439886 HYKKA2RU49 373 aa11.13□□□□□ -0.63
SMPD4-209ENST00000439886 GTPBP1O00178 669 aaKnown RBP11.13□□□□□ -0.63
SMPD4-209ENST00000439886 MPZL2O60487 215 aa11.13□□□□□ -0.63
SMPD4-209ENST00000439886 GJB5O95377 273 aa11.13□□□□□ -0.63
SMPD4-209ENST00000439886 FABP1P07148 127 aa11.13□□□□□ -0.63
SMPD4-209ENST00000439886 LHCGRP22888 699 aa11.13□□□□□ -0.63
SMPD4-209ENST00000439886 ETV5P41161 510 aa11.13□□□□□ -0.63
SMPD4-209ENST00000439886 SRP9P49458 86 aaKnown RBP11.13□□□□□ -0.63
SMPD4-209ENST00000439886 SGSHP51688 502 aa11.13□□□□□ -0.63
SMPD4-209ENST00000439886 DOC2AQ14183 400 aa11.13□□□□□ -0.63
SMPD4-209ENST00000439886 ZNF791Q3KP31 576 aaPredicted RBP11.13□□□□□ -0.63
SMPD4-209ENST00000439886 BICRALQ6AI39 1079 aa11.13□□□□□ -0.63
SMPD4-209ENST00000439886 TRIM40Q6P9F5 258 aa11.13□□□□□ -0.63
SMPD4-209ENST00000439886 JAZF1Q86VZ6 243 aa11.13□□□□□ -0.63
SMPD4-209ENST00000439886 KAT2AQ92830 837 aa11.13□□□□□ -0.63
SMPD4-209ENST00000439886 UFD1Q92890 307 aa11.13□□□□□ -0.63
SMPD4-209ENST00000439886 USP7Q93009 1102 aa11.13□□□□□ -0.63
SMPD4-209ENST00000439886 SLC25A46Q96AG3 418 aa11.13□□□□□ -0.63
SMPD4-209ENST00000439886 PPCDCQ96CD2 204 aa11.13□□□□□ -0.63
SMPD4-209ENST00000439886 GTPBP2Q9BX10 602 aaKnown RBP11.13□□□□□ -0.63
SMPD4-209ENST00000439886 OR51B5Q9H339 312 aa11.13□□□□□ -0.63
SMPD4-209ENST00000439886 SCML2Q9UQR0 700 aa11.13□□□□□ -0.63
SMPD4-209ENST00000439886 TRBV23-1A0A0A0MS06 115 aa11.12□□□□□ -0.63
SMPD4-209ENST00000439886 CXCL11O14625 94 aa11.12□□□□□ -0.63
SMPD4-209ENST00000439886 ZNF197O14709 1029 aa11.12□□□□□ -0.63
SMPD4-209ENST00000439886 ALPPP05187 535 aa11.12□□□□□ -0.63
SMPD4-209ENST00000439886 SERPIND1P05546 499 aa11.12□□□□□ -0.63
SMPD4-209ENST00000439886 TRAPPC2P0DI81 140 aa11.12□□□□□ -0.63
SMPD4-209ENST00000439886 TRAPPC2BP0DI82 140 aa11.12□□□□□ -0.63
SMPD4-209ENST00000439886 IL1RNP18510 177 aa11.12□□□□□ -0.63
SMPD4-209ENST00000439886 STOMP27105 288 aa11.12□□□□□ -0.63
SMPD4-209ENST00000439886 CAPZA1P52907 286 aa11.12□□□□□ -0.63
SMPD4-209ENST00000439886 RPS13P62277 151 aaKnown RBP11.12□□□□□ -0.63
SMPD4-209ENST00000439886 VEZF1Q14119 521 aa11.12□□□□□ -0.63
SMPD4-209ENST00000439886 MPP7Q5T2T1 576 aa11.12□□□□□ -0.63
SMPD4-209ENST00000439886 GPR142Q7Z601 462 aa11.12□□□□□ -0.63
SMPD4-209ENST00000439886 KATNB1Q9BVA0 655 aa11.12□□□□□ -0.63
SMPD4-209ENST00000439886 CDCA4Q9BXL8 241 aa11.12□□□□□ -0.63
SMPD4-209ENST00000439886 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.12□□□□□ -0.63
SMPD4-209ENST00000439886 NIPAL2Q9H841 368 aa11.12□□□□□ -0.63
SMPD4-209ENST00000439886 ACER3Q9NUN7 267 aa11.12□□□□□ -0.63
SMPD4-209ENST00000439886 ZFR2Q9UPR6 939 aaKnown RBP11.12□□□□□ -0.63
SMPD4-209ENST00000439886 ANGPT4Q9Y264 503 aa11.12□□□□□ -0.63
SMPD4-209ENST00000439886 BRCA1P38398 1863 aaKnown RBP11.12□□□□□ -0.63
SMPD4-209ENST00000439886 A0A1W2PPK0 400 aa11.12□□□□□ -0.63
SMPD4-209ENST00000439886 E7EQ34 232 aa11.12□□□□□ -0.63
SMPD4-209ENST00000439886 TBL1XO60907 577 aa11.12□□□□□ -0.63
SMPD4-209ENST00000439886 DNASE1P24855 282 aa11.12□□□□□ -0.63
SMPD4-209ENST00000439886 CORO1AP31146 461 aaKnown RBP11.12□□□□□ -0.63
SMPD4-209ENST00000439886 PTGER1P34995 402 aa11.12□□□□□ -0.63
SMPD4-209ENST00000439886 ATP5C1P36542 298 aaKnown RBP11.12□□□□□ -0.63
SMPD4-209ENST00000439886 ACLYP53396 1101 aa11.12□□□□□ -0.63
SMPD4-209ENST00000439886 MAP4K2Q12851 820 aa11.12□□□□□ -0.63
SMPD4-209ENST00000439886 PIN1Q13526 163 aaPredicted RBP11.12□□□□□ -0.63
SMPD4-209ENST00000439886 POM121L1PQ3SYA9 428 aa11.12□□□□□ -0.63
SMPD4-209ENST00000439886 SYTL3Q4VX76 610 aa11.12□□□□□ -0.63
SMPD4-209ENST00000439886 KLHL22Q53GT1 634 aa11.12□□□□□ -0.63
SMPD4-209ENST00000439886 RETSATQ6NUM9 610 aa11.12□□□□□ -0.63
SMPD4-209ENST00000439886 FAM92BQ6ZTR7 304 aa11.12□□□□□ -0.63
SMPD4-209ENST00000439886 TCTE3Q8IZS6 198 aa11.12□□□□□ -0.63
SMPD4-209ENST00000439886 SYNPOQ8N3V7 929 aa11.12□□□□□ -0.63
SMPD4-209ENST00000439886 EID2BQ96D98 161 aa11.12□□□□□ -0.63
SMPD4-209ENST00000439886 DCLRE1CQ96SD1 692 aaKnown RBP11.12□□□□□ -0.63
SMPD4-209ENST00000439886 RAD9AQ99638 391 aa11.12□□□□□ -0.63
SMPD4-209ENST00000439886 P2RY13Q9BPV8 354 aa11.12□□□□□ -0.63
SMPD4-209ENST00000439886 ACTR6Q9GZN1 396 aa11.12□□□□□ -0.63
SMPD4-209ENST00000439886 TINAGQ9UJW2 476 aa11.12□□□□□ -0.63
SMPD4-209ENST00000439886 PRSS47A8MTI9 375 aa11.11□□□□□ -0.63
SMPD4-209ENST00000439886 F2P00734 622 aa11.11□□□□□ -0.63
SMPD4-209ENST00000439886 JUPP14923 745 aa11.11□□□□□ -0.63
SMPD4-209ENST00000439886 RAB3AP20336 220 aa11.11□□□□□ -0.63
SMPD4-209ENST00000439886 HLA-DMAP28067 261 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms