RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 SLC3A1Q07837 685 aa8.6□□□□□ -1.03
COPB1-202ENST00000439561 DBPQ10586 325 aaPredicted RBP8.6□□□□□ -1.03
COPB1-202ENST00000439561 NTRK2Q16620 822 aa8.6□□□□□ -1.03
COPB1-202ENST00000439561 ZXDCQ2QGD7 858 aaPredicted RBP8.6□□□□□ -1.03
COPB1-202ENST00000439561 ARTNQ5T4W7 220 aa8.6□□□□□ -1.03
COPB1-202ENST00000439561 FAAH2Q6GMR7 532 aa8.6□□□□□ -1.03
COPB1-202ENST00000439561 DDX53Q86TM3 631 aaKnown RBP8.6□□□□□ -1.03
COPB1-202ENST00000439561 LSRQ86X29 649 aaPredicted RBP8.6□□□□□ -1.03
COPB1-202ENST00000439561 HORMAD2Q8N7B1 307 aa8.6□□□□□ -1.03
COPB1-202ENST00000439561 NANOGP1Q8N7R0 232 aa8.6□□□□□ -1.03
COPB1-202ENST00000439561 OR51G2Q8NGK0 314 aa8.6□□□□□ -1.03
COPB1-202ENST00000439561 CEP76Q8TAP6 659 aa8.6□□□□□ -1.03
COPB1-202ENST00000439561 ZNF671Q8TAW3 534 aa8.6□□□□□ -1.03
COPB1-202ENST00000439561 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.6□□□□□ -1.03
COPB1-202ENST00000439561 C16orf78Q8WTQ4 265 aa8.6□□□□□ -1.03
COPB1-202ENST00000439561 RFT1Q96AA3 541 aa8.6□□□□□ -1.03
COPB1-202ENST00000439561 UPRTQ96BW1 309 aa8.6□□□□□ -1.03
COPB1-202ENST00000439561 MS4A4AQ96JQ5 239 aa8.6□□□□□ -1.03
COPB1-202ENST00000439561 BBS4Q96RK4 519 aa8.6□□□□□ -1.03
COPB1-202ENST00000439561 SLC6A16Q9GZN6 736 aa8.6□□□□□ -1.03
COPB1-202ENST00000439561 SAP130Q9H0E3 1048 aa8.6□□□□□ -1.03
COPB1-202ENST00000439561 SMG9Q9H0W8 520 aaKnown RBP8.6□□□□□ -1.03
COPB1-202ENST00000439561 SLC28A3Q9HAS3 691 aa8.6□□□□□ -1.03
COPB1-202ENST00000439561 ATP13A2Q9NQ11 1180 aa8.6□□□□□ -1.03
COPB1-202ENST00000439561 ZCCHC3Q9NUD5 404 aaKnown RBP8.6□□□□□ -1.03
COPB1-202ENST00000439561 EVA1BQ9NVM1 165 aa8.6□□□□□ -1.03
COPB1-202ENST00000439561 NDUFB11Q9NX14 153 aa8.6□□□□□ -1.03
COPB1-202ENST00000439561 SLC25A13Q9UJS0 675 aa8.6□□□□□ -1.03
COPB1-202ENST00000439561 STOML2Q9UJZ1 356 aa8.6□□□□□ -1.03
COPB1-202ENST00000439561 A0A0B4J293 547 aa8.59□□□□□ -1.03
COPB1-202ENST00000439561 FAAHO00519 579 aa8.59□□□□□ -1.03
COPB1-202ENST00000439561 HCN1O60741 890 aa8.59□□□□□ -1.03
COPB1-202ENST00000439561 GPR37L1O60883 481 aa8.59□□□□□ -1.03
COPB1-202ENST00000439561 GCM2O75603 506 aaPredicted RBP8.59□□□□□ -1.03
COPB1-202ENST00000439561 RFPL3O75679 317 aa8.59□□□□□ -1.03
COPB1-202ENST00000439561 HLA-DPB1P04440 258 aa8.59□□□□□ -1.03
COPB1-202ENST00000439561 PDHA2P29803 388 aa8.59□□□□□ -1.03
COPB1-202ENST00000439561 CD70P32970 193 aa8.59□□□□□ -1.03
COPB1-202ENST00000439561 RPL3P39023 403 aaKnown RBP8.59□□□□□ -1.03
COPB1-202ENST00000439561 NNMTP40261 264 aa8.59□□□□□ -1.03
COPB1-202ENST00000439561 LIM2P55344 173 aa8.59□□□□□ -1.03
COPB1-202ENST00000439561 WDR5P61964 334 aaKnown RBP8.59□□□□□ -1.03
COPB1-202ENST00000439561 FABP5Q01469 135 aa8.59□□□□□ -1.03
COPB1-202ENST00000439561 GGTA1PQ4G0N0 100 aa8.59□□□□□ -1.03
COPB1-202ENST00000439561 CDC73Q6P1J9 531 aa8.59□□□□□ -1.03
COPB1-202ENST00000439561 PODNL1Q6PEZ8 512 aa8.59□□□□□ -1.03
COPB1-202ENST00000439561 FAM92BQ6ZTR7 304 aa8.59□□□□□ -1.03
COPB1-202ENST00000439561 WDR53Q7Z5U6 358 aaPredicted RBP8.59□□□□□ -1.03
COPB1-202ENST00000439561 TMEM173Q86WV6 379 aaPredicted RBP8.59□□□□□ -1.03
COPB1-202ENST00000439561 CACUL1Q86Y37 369 aa8.59□□□□□ -1.03
COPB1-202ENST00000439561 RDH10Q8IZV5 341 aa8.59□□□□□ -1.03
COPB1-202ENST00000439561 GALNT11Q8NCW6 608 aa8.59□□□□□ -1.03
COPB1-202ENST00000439561 OR4M2Q8NGB6 313 aa8.59□□□□□ -1.03
COPB1-202ENST00000439561 HCAR2Q8TDS4 363 aa8.59□□□□□ -1.03
COPB1-202ENST00000439561 RNF31Q96EP0 1072 aa8.59□□□□□ -1.03
COPB1-202ENST00000439561 SECISBP2Q96T21 854 aaKnown RBP8.59□□□□□ -1.03
COPB1-202ENST00000439561 DHRS9Q9BPW9 319 aa8.59□□□□□ -1.03
COPB1-202ENST00000439561 BHLHE41Q9C0J9 482 aaPredicted RBP8.59□□□□□ -1.03
COPB1-202ENST00000439561 CAPN10Q9HC96 672 aa8.59□□□□□ -1.03
COPB1-202ENST00000439561 MRPL39Q9NYK5 338 aaKnown RBP8.59□□□□□ -1.03
COPB1-202ENST00000439561 KLHL21Q9UJP4 597 aa8.59□□□□□ -1.03
COPB1-202ENST00000439561 ASF1AQ9Y294 204 aa8.59□□□□□ -1.03
COPB1-202ENST00000439561 PRAMEF25A6NGN4 478 aa8.59□□□□□ -1.03
COPB1-202ENST00000439561 CPSF4LA6NMK7 179 aaKnown RBP8.59□□□□□ -1.03
COPB1-202ENST00000439561 FAM170BA6NMN3 283 aa8.59□□□□□ -1.03
COPB1-202ENST00000439561 KPNA3O00505 521 aaPredicted RBP8.59□□□□□ -1.03
COPB1-202ENST00000439561 PDPK1O15530 556 aa8.59□□□□□ -1.03
COPB1-202ENST00000439561 ATG13O75143 517 aa8.59□□□□□ -1.03
COPB1-202ENST00000439561 CD160O95971 181 aa8.59□□□□□ -1.03
COPB1-202ENST00000439561 ZNF8P17098 575 aaPredicted RBP8.59□□□□□ -1.03
COPB1-202ENST00000439561 ZNF157P51786 506 aaPredicted RBP8.59□□□□□ -1.03
COPB1-202ENST00000439561 VSX2P58304 361 aaPredicted RBP8.59□□□□□ -1.03
COPB1-202ENST00000439561 B4GALNT1Q00973 533 aa8.59□□□□□ -1.03
COPB1-202ENST00000439561 LMAN2Q12907 356 aa8.59□□□□□ -1.03
COPB1-202ENST00000439561 ZMYND11Q15326 602 aa8.59□□□□□ -1.03
COPB1-202ENST00000439561 GRHL2Q6ISB3 625 aa8.59□□□□□ -1.03
COPB1-202ENST00000439561 SLC30A6Q6NXT4 461 aa8.59□□□□□ -1.03
COPB1-202ENST00000439561 TSEN54Q7Z6J9 526 aaKnown RBP8.59□□□□□ -1.03
COPB1-202ENST00000439561 OR10H4Q8NGA5 316 aa8.59□□□□□ -1.03
COPB1-202ENST00000439561 OR4C15Q8NGM1 316 aa8.59□□□□□ -1.03
COPB1-202ENST00000439561 RAET1EQ8TD07 263 aa8.59□□□□□ -1.03
COPB1-202ENST00000439561 SLC38A5Q8WUX1 472 aa8.59□□□□□ -1.03
COPB1-202ENST00000439561 AUTS2Q8WXX7 1259 aa8.59□□□□□ -1.03
COPB1-202ENST00000439561 RIT1Q92963 219 aa8.59□□□□□ -1.03
COPB1-202ENST00000439561 SAMD11Q96NU1 681 aa8.59□□□□□ -1.03
COPB1-202ENST00000439561 MVB12BQ9H7P6 319 aa8.59□□□□□ -1.03
COPB1-202ENST00000439561 AHSPQ9NZD4 102 aa8.59□□□□□ -1.03
COPB1-202ENST00000439561 FTSJ1Q9UET6 329 aa8.59□□□□□ -1.03
COPB1-202ENST00000439561 KCNN3Q9UGI6 736 aa8.59□□□□□ -1.03
COPB1-202ENST00000439561 TANC1Q9C0D5 1861 aa8.59□□□□□ -1.03
COPB1-202ENST00000439561 KCNE1BA0A087WTH5 132 aa8.59□□□□□ -1.03
COPB1-202ENST00000439561 FAM183AA6NL82 134 aa8.59□□□□□ -1.03
COPB1-202ENST00000439561 B8ZZF3 427 aa8.59□□□□□ -1.03
COPB1-202ENST00000439561 PGRMC2O15173 223 aa8.59□□□□□ -1.03
COPB1-202ENST00000439561 AKAP8O43823 692 aaKnown RBP8.59□□□□□ -1.03
COPB1-202ENST00000439561 HRGP04196 525 aa8.59□□□□□ -1.03
COPB1-202ENST00000439561 CD3GP09693 182 aa8.59□□□□□ -1.03
COPB1-202ENST00000439561 ANXA3P12429 323 aa8.59□□□□□ -1.03
COPB1-202ENST00000439561 GABRB1P18505 474 aa8.59□□□□□ -1.03
COPB1-202ENST00000439561 DDCP20711 480 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms