RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 GTPBP1O00178 669 aaKnown RBP9.44□□□□□ -0.9
CDC42SE1-202ENST00000439374 WNT9AO14904 365 aa9.44□□□□□ -0.9
CDC42SE1-202ENST00000439374 ZNF780AO75290 641 aaPredicted RBP9.44□□□□□ -0.9
CDC42SE1-202ENST00000439374 OR7A10O76100 309 aa9.44□□□□□ -0.9
CDC42SE1-202ENST00000439374 PSMB5P28074 263 aa9.44□□□□□ -0.9
CDC42SE1-202ENST00000439374 IRS1P35568 1242 aa9.44□□□□□ -0.9
CDC42SE1-202ENST00000439374 GGT2P36268 569 aa9.44□□□□□ -0.9
CDC42SE1-202ENST00000439374 CD79BP40259 229 aa9.44□□□□□ -0.9
CDC42SE1-202ENST00000439374 MAP2K3P46734 347 aa9.44□□□□□ -0.9
CDC42SE1-202ENST00000439374 SLC6A11P48066 632 aa9.44□□□□□ -0.9
CDC42SE1-202ENST00000439374 MANFP55145 182 aaKnown RBP9.44□□□□□ -0.9
CDC42SE1-202ENST00000439374 PFN3P60673 137 aa9.44□□□□□ -0.9
CDC42SE1-202ENST00000439374 RPS7P62081 194 aaKnown RBP9.44□□□□□ -0.9
CDC42SE1-202ENST00000439374 SCARB2Q14108 478 aa9.44□□□□□ -0.9
CDC42SE1-202ENST00000439374 TMEM215Q68D42 235 aa9.44□□□□□ -0.9
CDC42SE1-202ENST00000439374 LRRC70Q7Z2Q7 622 aa9.44□□□□□ -0.9
CDC42SE1-202ENST00000439374 KRT73Q86Y46 540 aa9.44□□□□□ -0.9
CDC42SE1-202ENST00000439374 ZNF431Q8TF32 576 aaPredicted RBP9.44□□□□□ -0.9
CDC42SE1-202ENST00000439374 AKAP1Q92667 903 aaKnown RBP eCLIP9.44□□□□□ -0.9
CDC42SE1-202ENST00000439374 GLYATL1Q969I3 302 aa9.44□□□□□ -0.9
CDC42SE1-202ENST00000439374 PRAP1Q96NZ9 151 aa9.44□□□□□ -0.9
CDC42SE1-202ENST00000439374 F2RL3Q96RI0 385 aa9.44□□□□□ -0.9
CDC42SE1-202ENST00000439374 IL36AQ9UHA7 158 aa9.44□□□□□ -0.9
CDC42SE1-202ENST00000439374 ZNF236Q9UL36 1845 aa9.44□□□□□ -0.9
CDC42SE1-202ENST00000439374 FAM220BPB1ANY3 271 aa9.44□□□□□ -0.9
CDC42SE1-202ENST00000439374 ATP6V1G2-DDX39BF2Z307 99 aa9.44□□□□□ -0.9
CDC42SE1-202ENST00000439374 INMT-MINDY4F8WBC2 141 aa9.44□□□□□ -0.9
CDC42SE1-202ENST00000439374 PLATP00750 562 aa9.44□□□□□ -0.9
CDC42SE1-202ENST00000439374 ITGAMP11215 1152 aa9.44□□□□□ -0.9
CDC42SE1-202ENST00000439374 JUPP14923 745 aa9.44□□□□□ -0.9
CDC42SE1-202ENST00000439374 TIMP2P16035 220 aa9.44□□□□□ -0.9
CDC42SE1-202ENST00000439374 CD72P21854 359 aa9.44□□□□□ -0.9
CDC42SE1-202ENST00000439374 CHMP24386 653 aa9.44□□□□□ -0.9
CDC42SE1-202ENST00000439374 CDC20Q12834 499 aa9.44□□□□□ -0.9
CDC42SE1-202ENST00000439374 GPR50Q13585 617 aa9.44□□□□□ -0.9
CDC42SE1-202ENST00000439374 FCN2Q15485 313 aa9.44□□□□□ -0.9
CDC42SE1-202ENST00000439374 TIMM50Q3ZCQ8 353 aa9.44□□□□□ -0.9
CDC42SE1-202ENST00000439374 ATG9BQ674R7 924 aa9.44□□□□□ -0.9
CDC42SE1-202ENST00000439374 ESPNLQ6ZVH7 1005 aa9.44□□□□□ -0.9
CDC42SE1-202ENST00000439374 PTOV1Q86YD1 416 aa9.44□□□□□ -0.9
CDC42SE1-202ENST00000439374 GALNT6Q8NCL4 622 aa9.44□□□□□ -0.9
CDC42SE1-202ENST00000439374 RNFT2Q96EX2 444 aa9.44□□□□□ -0.9
CDC42SE1-202ENST00000439374 C1QTNF3Q9BXJ4 246 aa9.44□□□□□ -0.9
CDC42SE1-202ENST00000439374 MED28Q9H204 178 aa9.44□□□□□ -0.9
CDC42SE1-202ENST00000439374 KCNK12Q9HB15 430 aa9.44□□□□□ -0.9
CDC42SE1-202ENST00000439374 NUDT15Q9NV35 164 aa9.44□□□□□ -0.9
CDC42SE1-202ENST00000439374 RDH8Q9NYR8 311 aa9.44□□□□□ -0.9
CDC42SE1-202ENST00000439374 NDUFAF4Q9P032 175 aa9.44□□□□□ -0.9
CDC42SE1-202ENST00000439374 SH2B3Q9UQQ2 575 aa9.44□□□□□ -0.9
CDC42SE1-202ENST00000439374 CCL27Q9Y4X3 112 aa9.44□□□□□ -0.9
CDC42SE1-202ENST00000439374 SNX11Q9Y5W9 270 aa9.44□□□□□ -0.9
CDC42SE1-202ENST00000439374 EEF1E1O43324 174 aaKnown RBP9.44□□□□□ -0.9
CDC42SE1-202ENST00000439374 MYOGP15173 224 aa9.44□□□□□ -0.9
CDC42SE1-202ENST00000439374 PRKACAP17612 351 aa9.44□□□□□ -0.9
CDC42SE1-202ENST00000439374 MYL12AP19105 171 aa9.44□□□□□ -0.9
CDC42SE1-202ENST00000439374 WDR5P61964 334 aaKnown RBP9.44□□□□□ -0.9
CDC42SE1-202ENST00000439374 HBA1P69905 142 aa9.44□□□□□ -0.9
CDC42SE1-202ENST00000439374 SRSF11Q05519 484 aaKnown RBP9.44□□□□□ -0.9
CDC42SE1-202ENST00000439374 COX10Q12887 443 aa9.44□□□□□ -0.9
CDC42SE1-202ENST00000439374 KIAA0040Q15053 153 aa9.44□□□□□ -0.9
CDC42SE1-202ENST00000439374 GPR19Q15760 415 aa9.44□□□□□ -0.9
CDC42SE1-202ENST00000439374 SAXO2Q658L1 398 aa9.44□□□□□ -0.9
CDC42SE1-202ENST00000439374 TRIM46Q7Z4K8 759 aa9.44□□□□□ -0.9
CDC42SE1-202ENST00000439374 MARCH9Q86YJ5 346 aa9.44□□□□□ -0.9
CDC42SE1-202ENST00000439374 NPAS3Q8IXF0 933 aa9.44□□□□□ -0.9
CDC42SE1-202ENST00000439374 GALNT11Q8NCW6 608 aa9.44□□□□□ -0.9
CDC42SE1-202ENST00000439374 C12orf66Q96MD2 445 aa9.44□□□□□ -0.9
CDC42SE1-202ENST00000439374 SLC29A3Q9BZD2 475 aa9.44□□□□□ -0.9
CDC42SE1-202ENST00000439374 QRSL1Q9H0R6 528 aaKnown RBP9.44□□□□□ -0.9
CDC42SE1-202ENST00000439374 POLR2J3Q9H1A7 115 aaKnown RBP9.44□□□□□ -0.9
CDC42SE1-202ENST00000439374 NMNAT1Q9HAN9 279 aaPredicted RBP9.44□□□□□ -0.9
CDC42SE1-202ENST00000439374 REV1Q9UBZ9 1251 aa9.44□□□□□ -0.9
CDC42SE1-202ENST00000439374 PRUNE2Q8WUY3 3088 aa9.44□□□□□ -0.9
CDC42SE1-202ENST00000439374 VWA8A3KMH1 1905 aa9.43□□□□□ -0.9
CDC42SE1-202ENST00000439374 TRIM64BA6NI03 449 aa9.43□□□□□ -0.9
CDC42SE1-202ENST00000439374 FAM183AA6NL82 134 aa9.43□□□□□ -0.9
CDC42SE1-202ENST00000439374 M0R3H8 397 aa9.43□□□□□ -0.9
CDC42SE1-202ENST00000439374 KDM4BO94953 1096 aa9.43□□□□□ -0.9
CDC42SE1-202ENST00000439374 PAHP00439 452 aa9.43□□□□□ -0.9
CDC42SE1-202ENST00000439374 NPPAP01160 153 aa9.43□□□□□ -0.9
CDC42SE1-202ENST00000439374 IL3P08700 152 aa9.43□□□□□ -0.9
CDC42SE1-202ENST00000439374 ENPP1P22413 925 aa9.43□□□□□ -0.9
CDC42SE1-202ENST00000439374 BUD31P41223 144 aaPredicted RBP9.43□□□□□ -0.9
CDC42SE1-202ENST00000439374 KEAP1Q14145 624 aa9.43□□□□□ -0.9
CDC42SE1-202ENST00000439374 STK11Q15831 433 aa9.43□□□□□ -0.9
CDC42SE1-202ENST00000439374 DUSP7Q16829 419 aa9.43□□□□□ -0.9
CDC42SE1-202ENST00000439374 IFI44LQ53G44 452 aa9.43□□□□□ -0.9
CDC42SE1-202ENST00000439374 SLC35F1Q5T1Q4 408 aa9.43□□□□□ -0.9
CDC42SE1-202ENST00000439374 FAM27D1Q5T7N8 215 aa9.43□□□□□ -0.9
CDC42SE1-202ENST00000439374 ERICH5Q6P6B1 374 aa9.43□□□□□ -0.9
CDC42SE1-202ENST00000439374 TRIM40Q6P9F5 258 aa9.43□□□□□ -0.9
CDC42SE1-202ENST00000439374 HTR3DQ70Z44 454 aa9.43□□□□□ -0.9
CDC42SE1-202ENST00000439374 COMMD6Q7Z4G1 85 aa9.43□□□□□ -0.9
CDC42SE1-202ENST00000439374 SLC43A3Q8NBI5 491 aa9.43□□□□□ -0.9
CDC42SE1-202ENST00000439374 OR5AR1Q8NGP9 310 aa9.43□□□□□ -0.9
CDC42SE1-202ENST00000439374 ZNF480Q8WV37 535 aa9.43□□□□□ -0.9
CDC42SE1-202ENST00000439374 OR4K3Q96R72 315 aa9.43□□□□□ -0.9
CDC42SE1-202ENST00000439374 SNX18Q96RF0 628 aa9.43□□□□□ -0.9
CDC42SE1-202ENST00000439374 NELL2Q99435 816 aa9.43□□□□□ -0.9
CDC42SE1-202ENST00000439374 TRMT61BQ9BVS5 477 aaKnown RBP9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms