RNA–Protein interactions for RNA: ENST00000438497.5

SCRN1-208, Transcript of secernin 1, humanhuman

TSL 4

Gene SCRN1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-208ENST00000438497 RHOXF2Q9BQY4 288 aa7.88□□□□□ -1.15
SCRN1-208ENST00000438497 PIGQQ9BRB3 760 aa7.88□□□□□ -1.15
SCRN1-208ENST00000438497 TRIM54Q9BYV2 358 aa7.88□□□□□ -1.15
SCRN1-208ENST00000438497 YIPF3Q9GZM5 350 aa7.88□□□□□ -1.15
SCRN1-208ENST00000438497 AICDAQ9GZX7 198 aa7.88□□□□□ -1.15
SCRN1-208ENST00000438497 FBXO6Q9NRD1 293 aaPredicted RBP7.88□□□□□ -1.15
SCRN1-208ENST00000438497 CTNNAL1Q9UBT7 734 aa7.88□□□□□ -1.15
SCRN1-208ENST00000438497 AMFRQ9UKV5 643 aa7.88□□□□□ -1.15
SCRN1-208ENST00000438497 CNOT11Q9UKZ1 510 aaKnown RBP7.88□□□□□ -1.15
SCRN1-208ENST00000438497 TMCO1Q9UM00 188 aa7.88□□□□□ -1.15
SCRN1-208ENST00000438497 WIF1Q9Y5W5 379 aa7.88□□□□□ -1.15
SCRN1-208ENST00000438497 MAD1L1Q9Y6D9 718 aa7.88□□□□□ -1.15
SCRN1-208ENST00000438497 CHCHD2Q9Y6H1 151 aaPredicted RBP7.88□□□□□ -1.15
SCRN1-208ENST00000438497 CR1P17927 2039 aa7.88□□□□□ -1.15
SCRN1-208ENST00000438497 RAI1Q7Z5J4 1906 aaPredicted RBP7.88□□□□□ -1.15
SCRN1-208ENST00000438497 A0A088AWK7 358 aa7.87□□□□□ -1.15
SCRN1-208ENST00000438497 PABPN1LA6NDY0 278 aaKnown RBP7.87□□□□□ -1.15
SCRN1-208ENST00000438497 TP53I11O14683 189 aa7.87□□□□□ -1.15
SCRN1-208ENST00000438497 MSTNO14793 375 aa7.87□□□□□ -1.15
SCRN1-208ENST00000438497 TPD52L2O43399 206 aaKnown RBP7.87□□□□□ -1.15
SCRN1-208ENST00000438497 ERI3O43414 337 aaKnown RBP7.87□□□□□ -1.15
SCRN1-208ENST00000438497 TMCC2O75069 709 aa7.87□□□□□ -1.15
SCRN1-208ENST00000438497 LDB3O75112 727 aa7.87□□□□□ -1.15
SCRN1-208ENST00000438497 H2AFYO75367 372 aaKnown RBP7.87□□□□□ -1.15
SCRN1-208ENST00000438497 ANP32DO95626 131 aa7.87□□□□□ -1.15
SCRN1-208ENST00000438497 LINGO3P0C6S8 592 aa7.87□□□□□ -1.15
SCRN1-208ENST00000438497 CPN1P15169 458 aa7.87□□□□□ -1.15
SCRN1-208ENST00000438497 PAMP19021 973 aa7.87□□□□□ -1.15
SCRN1-208ENST00000438497 ZNF10P21506 573 aaPredicted RBP7.87□□□□□ -1.15
SCRN1-208ENST00000438497 CPOXP36551 454 aa7.87□□□□□ -1.15
SCRN1-208ENST00000438497 CD79BP40259 229 aa7.87□□□□□ -1.15
SCRN1-208ENST00000438497 MSH2P43246 934 aa7.87□□□□□ -1.15
SCRN1-208ENST00000438497 RGS4P49798 205 aa7.87□□□□□ -1.15
SCRN1-208ENST00000438497 NAGLUP54802 743 aa7.87□□□□□ -1.15
SCRN1-208ENST00000438497 LIM2P55344 173 aa7.87□□□□□ -1.15
SCRN1-208ENST00000438497 ELF3P78545 371 aaPredicted RBP7.87□□□□□ -1.15
SCRN1-208ENST00000438497 MRPS35P82673 323 aaKnown RBP7.87□□□□□ -1.15
SCRN1-208ENST00000438497 SRYQ05066 204 aa7.87□□□□□ -1.15
SCRN1-208ENST00000438497 IFT88Q13099 833 aa7.87□□□□□ -1.15
SCRN1-208ENST00000438497 THOC5Q13769 683 aaKnown RBP7.87□□□□□ -1.15
SCRN1-208ENST00000438497 SERTAD2Q14140 314 aa7.87□□□□□ -1.15
SCRN1-208ENST00000438497 SPA17Q15506 151 aa7.87□□□□□ -1.15
SCRN1-208ENST00000438497 TBCELQ5QJ74 424 aa7.87□□□□□ -1.15
SCRN1-208ENST00000438497 DCST1Q5T197 706 aa7.87□□□□□ -1.15
SCRN1-208ENST00000438497 LRRC8EQ6NSJ5 796 aa7.87□□□□□ -1.15
SCRN1-208ENST00000438497 UGT3A1Q6NUS8 523 aa7.87□□□□□ -1.15
SCRN1-208ENST00000438497 NXPE4Q6UWF7 544 aa7.87□□□□□ -1.15
SCRN1-208ENST00000438497 LMNTD2Q8IXW0 634 aa7.87□□□□□ -1.15
SCRN1-208ENST00000438497 KLHDC8AQ8IYD2 350 aa7.87□□□□□ -1.15
SCRN1-208ENST00000438497 GCNT2Q8N0V5 402 aa7.87□□□□□ -1.15
SCRN1-208ENST00000438497 UBL4BQ8N7F7 174 aa7.87□□□□□ -1.15
SCRN1-208ENST00000438497 NUBPLQ8TB37 319 aa7.87□□□□□ -1.15
SCRN1-208ENST00000438497 ATG4AQ8WYN0 398 aa7.87□□□□□ -1.15
SCRN1-208ENST00000438497 CCT6BQ92526 530 aa7.87□□□□□ -1.15
SCRN1-208ENST00000438497 WNT2BQ93097 391 aa7.87□□□□□ -1.15
SCRN1-208ENST00000438497 UCN3Q969E3 161 aa7.87□□□□□ -1.15
SCRN1-208ENST00000438497 GAL3ST3Q96A11 431 aa7.87□□□□□ -1.15
SCRN1-208ENST00000438497 ANKRD9Q96BM1 317 aaPredicted RBP7.87□□□□□ -1.15
SCRN1-208ENST00000438497 MS4A6EQ96DS6 147 aa7.87□□□□□ -1.15
SCRN1-208ENST00000438497 TRMT61AQ96FX7 289 aaKnown RBP7.87□□□□□ -1.15
SCRN1-208ENST00000438497 ZNF597Q96LX8 424 aa7.87□□□□□ -1.15
SCRN1-208ENST00000438497 TSNARE1Q96NA8 513 aa7.87□□□□□ -1.15
SCRN1-208ENST00000438497 QRFPRQ96P65 431 aa7.87□□□□□ -1.15
SCRN1-208ENST00000438497 CCT8L2Q96SF2 557 aa7.87□□□□□ -1.15
SCRN1-208ENST00000438497 TUBA1CQ9BQE3 449 aa7.87□□□□□ -1.15
SCRN1-208ENST00000438497 BEX2Q9BXY8 128 aa7.87□□□□□ -1.15
SCRN1-208ENST00000438497 PELI2Q9HAT8 420 aa7.87□□□□□ -1.15
SCRN1-208ENST00000438497 LRTM1Q9HBL6 345 aa7.87□□□□□ -1.15
SCRN1-208ENST00000438497 SYBUQ9NX95 663 aa7.87□□□□□ -1.15
SCRN1-208ENST00000438497 ARL15Q9NXU5 204 aa7.87□□□□□ -1.15
SCRN1-208ENST00000438497 PAK5Q9P286 719 aa7.87□□□□□ -1.15
SCRN1-208ENST00000438497 PACSIN3Q9UKS6 424 aa7.87□□□□□ -1.15
SCRN1-208ENST00000438497 DAPP1Q9UN19 280 aa7.87□□□□□ -1.15
SCRN1-208ENST00000438497 SOX13Q9UN79 622 aa7.87□□□□□ -1.15
SCRN1-208ENST00000438497 DYRK1BQ9Y463 629 aa7.87□□□□□ -1.15
SCRN1-208ENST00000438497 COMMD10Q9Y6G5 202 aa7.87□□□□□ -1.15
SCRN1-208ENST00000438497 IKBKGQ9Y6K9 419 aa7.87□□□□□ -1.15
SCRN1-208ENST00000438497 ROS1P08922 2347 aa7.87□□□□□ -1.15
SCRN1-208ENST00000438497 LRIT2A6NDA9 550 aa7.86□□□□□ -1.15
SCRN1-208ENST00000438497 BTNL10A8MVZ5 291 aa7.86□□□□□ -1.15
SCRN1-208ENST00000438497 LIASO43766 372 aa7.86□□□□□ -1.15
SCRN1-208ENST00000438497 MFAP3LO75121 409 aa7.86□□□□□ -1.15
SCRN1-208ENST00000438497 HAUS5O94927 633 aa7.86□□□□□ -1.15
SCRN1-208ENST00000438497 SNX4O95219 450 aa7.86□□□□□ -1.15
SCRN1-208ENST00000438497 ACTL6AO96019 429 aa7.86□□□□□ -1.15
SCRN1-208ENST00000438497 FBXO45P0C2W1 286 aa7.86□□□□□ -1.15
SCRN1-208ENST00000438497 ZSCAN5DPP0CG00 497 aa7.86□□□□□ -1.15
SCRN1-208ENST00000438497 COX7A2P14406 83 aa7.86□□□□□ -1.15
SCRN1-208ENST00000438497 LOXP28300 417 aaPredicted RBP7.86□□□□□ -1.15
SCRN1-208ENST00000438497 LSP1P33241 339 aa7.86□□□□□ -1.15
SCRN1-208ENST00000438497 SOX18P35713 384 aa7.86□□□□□ -1.15
SCRN1-208ENST00000438497 MASP1P48740 699 aa7.86□□□□□ -1.15
SCRN1-208ENST00000438497 PCYT1AP49585 367 aa7.86□□□□□ -1.15
SCRN1-208ENST00000438497 PLA2G16P53816 162 aa7.86□□□□□ -1.15
SCRN1-208ENST00000438497 SESN3P58005 492 aa7.86□□□□□ -1.15
SCRN1-208ENST00000438497 MXRA7P84157 204 aa7.86□□□□□ -1.15
SCRN1-208ENST00000438497 REEP5Q00765 189 aa7.86□□□□□ -1.15
SCRN1-208ENST00000438497 OCRLQ01968 901 aa7.86□□□□□ -1.15
SCRN1-208ENST00000438497 DHX9Q08211 1270 aaKnown RBP7.86□□□□□ -1.15
SCRN1-208ENST00000438497 OASLQ15646 514 aaKnown RBP7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms