RNA–Protein interactions for RNA: ENST00000438462.1

RTN4-211, Transcript of reticulon 4, humanhuman

TSL 5

Gene RTN4, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-211ENST00000438462 PCGF2P35227 344 aa9.81□□□□□ -0.84
RTN4-211ENST00000438462 SSR1P43307 286 aaKnown RBP9.81□□□□□ -0.84
RTN4-211ENST00000438462 HSD17B7P56937 341 aa9.81□□□□□ -0.84
RTN4-211ENST00000438462 FBXW4P57775 412 aa9.81□□□□□ -0.84
RTN4-211ENST00000438462 POLR2FP61218 127 aaKnown RBP9.81□□□□□ -0.84
RTN4-211ENST00000438462 ARHGAP19Q14CB8 494 aa9.81□□□□□ -0.84
RTN4-211ENST00000438462 ANKRD20A4Q4UJ75 823 aa9.81□□□□□ -0.84
RTN4-211ENST00000438462 CT47A1Q5JQC4 288 aaPredicted RBP9.81□□□□□ -0.84
RTN4-211ENST00000438462 ANKRD20A2Q5SQ80 823 aa9.81□□□□□ -0.84
RTN4-211ENST00000438462 ANKRD20A1Q5TYW2 823 aa9.81□□□□□ -0.84
RTN4-211ENST00000438462 ANKRD20A3Q5VUR7 823 aa9.81□□□□□ -0.84
RTN4-211ENST00000438462 NPNTQ6UXI9 565 aa9.81□□□□□ -0.84
RTN4-211ENST00000438462 KCTD6Q8NC69 237 aa9.81□□□□□ -0.84
RTN4-211ENST00000438462 RNF217Q8TC41 542 aa9.81□□□□□ -0.84
RTN4-211ENST00000438462 SPPL2AQ8TCT8 520 aa9.81□□□□□ -0.84
RTN4-211ENST00000438462 ZNF721Q8TF20 911 aa9.81□□□□□ -0.84
RTN4-211ENST00000438462 PYCR2Q96C36 320 aa9.81□□□□□ -0.84
RTN4-211ENST00000438462 SFXN2Q96NB2 322 aa9.81□□□□□ -0.84
RTN4-211ENST00000438462 POTEKPQ9BYX7 375 aa9.81□□□□□ -0.84
RTN4-211ENST00000438462 SERHLQ9NQF3 203 aa9.81□□□□□ -0.84
RTN4-211ENST00000438462 KLHL8Q9P2G9 620 aaPredicted RBP9.81□□□□□ -0.84
RTN4-211ENST00000438462 AMFRQ9UKV5 643 aa9.81□□□□□ -0.84
RTN4-211ENST00000438462 CLEC4AQ9UMR7 237 aa9.81□□□□□ -0.84
RTN4-211ENST00000438462 SYCE3A1L190 88 aa9.8□□□□□ -0.84
RTN4-211ENST00000438462 ETHE1O95571 254 aa9.8□□□□□ -0.84
RTN4-211ENST00000438462 MPIG6BO95866 241 aa9.8□□□□□ -0.84
RTN4-211ENST00000438462 SERPIND1P05546 499 aa9.8□□□□□ -0.84
RTN4-211ENST00000438462 RAB8AP61006 207 aa9.8□□□□□ -0.84
RTN4-211ENST00000438462 WASHC5Q12768 1159 aa9.8□□□□□ -0.84
RTN4-211ENST00000438462 PON3Q15166 354 aa9.8□□□□□ -0.84
RTN4-211ENST00000438462 KLHL22Q53GT1 634 aa9.8□□□□□ -0.84
RTN4-211ENST00000438462 ZNF544Q6NX49 715 aa9.8□□□□□ -0.84
RTN4-211ENST00000438462 SLC22A25Q6T423 547 aa9.8□□□□□ -0.84
RTN4-211ENST00000438462 SPATC1Q76KD6 591 aa9.8□□□□□ -0.84
RTN4-211ENST00000438462 FAM47BQ8NA70 645 aa9.8□□□□□ -0.84
RTN4-211ENST00000438462 MFSD9Q8NBP5 474 aa9.8□□□□□ -0.84
RTN4-211ENST00000438462 UTP15Q8TED0 518 aaKnown RBP9.8□□□□□ -0.84
RTN4-211ENST00000438462 ZNF480Q8WV37 535 aa9.8□□□□□ -0.84
RTN4-211ENST00000438462 SGCDQ92629 289 aa9.8□□□□□ -0.84
RTN4-211ENST00000438462 SLC25A28Q96A46 364 aa9.8□□□□□ -0.84
RTN4-211ENST00000438462 RADILQ96JH8 1075 aa9.8□□□□□ -0.84
RTN4-211ENST00000438462 PANX2Q96RD6 677 aa9.8□□□□□ -0.84
RTN4-211ENST00000438462 GAL3ST4Q96RP7 486 aa9.8□□□□□ -0.84
RTN4-211ENST00000438462 FERMT1Q9BQL6 677 aa9.8□□□□□ -0.84
RTN4-211ENST00000438462 CARD6Q9BX69 1037 aa9.8□□□□□ -0.84
RTN4-211ENST00000438462 FAM129AQ9BZQ8 928 aa9.8□□□□□ -0.84
RTN4-211ENST00000438462 KCNF1Q9H3M0 494 aa9.8□□□□□ -0.84
RTN4-211ENST00000438462 NLE1Q9NVX2 485 aaPredicted RBP9.8□□□□□ -0.84
RTN4-211ENST00000438462 WWOXQ9NZC7 414 aa9.8□□□□□ -0.84
RTN4-211ENST00000438462 NPAP1Q9NZP6 1156 aa9.8□□□□□ -0.84
RTN4-211ENST00000438462 HOOK1Q9UJC3 728 aaKnown RBP9.8□□□□□ -0.84
RTN4-211ENST00000438462 A0A1B0GUS0 222 aa9.79□□□□□ -0.84
RTN4-211ENST00000438462 GOLGA6L10A6NI86 522 aa9.79□□□□□ -0.84
RTN4-211ENST00000438462 ZNF839A8K0R7 811 aa9.79□□□□□ -0.84
RTN4-211ENST00000438462 H0YC42 278 aa9.79□□□□□ -0.84
RTN4-211ENST00000438462 GOLGA6L19H0YKK7 550 aa9.79□□□□□ -0.84
RTN4-211ENST00000438462 GCM2O75603 506 aaPredicted RBP9.79□□□□□ -0.84
RTN4-211ENST00000438462 SLC16A8O95907 504 aa9.79□□□□□ -0.84
RTN4-211ENST00000438462 TNNI3P19429 210 aa9.79□□□□□ -0.84
RTN4-211ENST00000438462 TCEA1P23193 301 aaKnown RBP9.79□□□□□ -0.84
RTN4-211ENST00000438462 HRH2P25021 359 aa9.79□□□□□ -0.84
RTN4-211ENST00000438462 FPR2P25090 351 aa9.79□□□□□ -0.84
RTN4-211ENST00000438462 HNF4AP41235 474 aa9.79□□□□□ -0.84
RTN4-211ENST00000438462 CASP3P42574 277 aa9.79□□□□□ -0.84
RTN4-211ENST00000438462 KLK7P49862 253 aa9.79□□□□□ -0.84
RTN4-211ENST00000438462 TPD52P55327 224 aaPredicted RBP9.79□□□□□ -0.84
RTN4-211ENST00000438462 MAP4K2Q12851 820 aa9.79□□□□□ -0.84
RTN4-211ENST00000438462 RUNX2Q13950 521 aa9.79□□□□□ -0.84
RTN4-211ENST00000438462 OLFML2AQ68BL7 652 aa9.79□□□□□ -0.84
RTN4-211ENST00000438462 TRIM40Q6P9F5 258 aa9.79□□□□□ -0.84
RTN4-211ENST00000438462 TMEM64Q6YI46 380 aa9.79□□□□□ -0.84
RTN4-211ENST00000438462 DOK3Q7L591 496 aa9.79□□□□□ -0.84
RTN4-211ENST00000438462 STK32CQ86UX6 486 aa9.79□□□□□ -0.84
RTN4-211ENST00000438462 OR51F2Q8NH61 342 aa9.79□□□□□ -0.84
RTN4-211ENST00000438462 PPP1R14AQ96A00 147 aa9.79□□□□□ -0.84
RTN4-211ENST00000438462 CDKN2AIPNLQ96HQ2 116 aa9.79□□□□□ -0.84
RTN4-211ENST00000438462 CLK4Q9HAZ1 481 aaKnown RBP9.79□□□□□ -0.84
RTN4-211ENST00000438462 FOLH1BQ9HBA9 442 aa9.79□□□□□ -0.84
RTN4-211ENST00000438462 TAS2R10Q9NYW0 307 aa9.79□□□□□ -0.84
RTN4-211ENST00000438462 XPR1Q9UBH6 696 aa9.79□□□□□ -0.84
RTN4-211ENST00000438462 CORO1CQ9ULV4 474 aaPredicted RBP9.79□□□□□ -0.84
RTN4-211ENST00000438462 ZNF175Q9Y473 711 aa9.79□□□□□ -0.84
RTN4-211ENST00000438462 DNAH7Q8WXX0 4024 aa9.79□□□□□ -0.84
RTN4-211ENST00000438462 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.78□□□□□ -0.84
RTN4-211ENST00000438462 C4orf51C9J302 202 aa9.78□□□□□ -0.84
RTN4-211ENST00000438462 AQP8O94778 261 aa9.78□□□□□ -0.84
RTN4-211ENST00000438462 TJP3O95049 919 aa9.78□□□□□ -0.84
RTN4-211ENST00000438462 CLDN9O95484 217 aa9.78□□□□□ -0.84
RTN4-211ENST00000438462 PGCP20142 388 aa9.78□□□□□ -0.84
RTN4-211ENST00000438462 MSNP26038 577 aaKnown RBP9.78□□□□□ -0.84
RTN4-211ENST00000438462 NEK2P51955 445 aa9.78□□□□□ -0.84
RTN4-211ENST00000438462 CTBP2P56545 445 aa9.78□□□□□ -0.84
RTN4-211ENST00000438462 CD69Q07108 199 aa9.78□□□□□ -0.84
RTN4-211ENST00000438462 GPS1Q13098 491 aa9.78□□□□□ -0.84
RTN4-211ENST00000438462 BAMBIQ13145 260 aa9.78□□□□□ -0.84
RTN4-211ENST00000438462 PIGHQ14442 188 aaPredicted RBP9.78□□□□□ -0.84
RTN4-211ENST00000438462 PDK2Q15119 407 aa9.78□□□□□ -0.84
RTN4-211ENST00000438462 C2orf68Q2NKX9 166 aa9.78□□□□□ -0.84
RTN4-211ENST00000438462 TSNAXIP1Q2TAA8 658 aa9.78□□□□□ -0.84
RTN4-211ENST00000438462 RANBP10Q6VN20 620 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms