RNA–Protein interactions for RNA: ENST00000438419.6

TRAPPC13-204, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-204ENST00000438419 CCL11P51671 97 aa2.96□□□□□ -1.94
TRAPPC13-204ENST00000438419 RIDAP52758 137 aaKnown RBP2.96□□□□□ -1.94
TRAPPC13-204ENST00000438419 NDUFV3P56181 108 aaKnown RBP2.96□□□□□ -1.94
TRAPPC13-204ENST00000438419 SLC26A5P58743 744 aa2.96□□□□□ -1.94
TRAPPC13-204ENST00000438419 RPL27P61353 136 aaKnown RBP2.96□□□□□ -1.94
TRAPPC13-204ENST00000438419 LMO4P61968 165 aa2.96□□□□□ -1.94
TRAPPC13-204ENST00000438419 RPS27AP62979 156 aaKnown RBP2.96□□□□□ -1.94
TRAPPC13-204ENST00000438419 ECSCRQ19T08 205 aa2.96□□□□□ -1.94
TRAPPC13-204ENST00000438419 KNOP1Q1ED39 458 aaKnown RBP2.96□□□□□ -1.94
TRAPPC13-204ENST00000438419 HERC4Q5GLZ8 1057 aaPredicted RBP2.96□□□□□ -1.94
TRAPPC13-204ENST00000438419 LDLRAP1Q5SW96 308 aa2.96□□□□□ -1.94
TRAPPC13-204ENST00000438419 LIPJQ5W064 366 aa2.96□□□□□ -1.94
TRAPPC13-204ENST00000438419 ZNF841Q6ZN19 808 aa2.96□□□□□ -1.94
TRAPPC13-204ENST00000438419 HIST2H2ABQ8IUE6 130 aaPredicted RBP2.96□□□□□ -1.94
TRAPPC13-204ENST00000438419 TBC1D10CQ8IV04 446 aa2.96□□□□□ -1.94
TRAPPC13-204ENST00000438419 LRRC17Q8N6Y2 441 aa2.96□□□□□ -1.94
TRAPPC13-204ENST00000438419 HIST1H2ACQ93077 130 aa2.96□□□□□ -1.94
TRAPPC13-204ENST00000438419 C16orf58Q96GQ5 468 aa2.96□□□□□ -1.94
TRAPPC13-204ENST00000438419 RAB11FIP5Q9BXF6 653 aa2.96□□□□□ -1.94
TRAPPC13-204ENST00000438419 NACA2Q9H009 215 aa2.96□□□□□ -1.94
TRAPPC13-204ENST00000438419 SP140LQ9H930 580 aa2.96□□□□□ -1.94
TRAPPC13-204ENST00000438419 WDR41Q9HAD4 459 aa2.96□□□□□ -1.94
TRAPPC13-204ENST00000438419 SLC25A19Q9HC21 320 aa2.96□□□□□ -1.94
TRAPPC13-204ENST00000438419 HPS4Q9NQG7 708 aa2.96□□□□□ -1.94
TRAPPC13-204ENST00000438419 SOHLH2Q9NX45 425 aa2.96□□□□□ -1.94
TRAPPC13-204ENST00000438419 ACTR3BQ9P1U1 418 aa2.96□□□□□ -1.94
TRAPPC13-204ENST00000438419 AUP1Q9Y679 476 aa2.96□□□□□ -1.94
TRAPPC13-204ENST00000438419 CUX2O14529 1486 aa2.95□□□□□ -1.94
TRAPPC13-204ENST00000438419 FGD5Q6ZNL6 1462 aa2.95□□□□□ -1.94
TRAPPC13-204ENST00000438419 BCLAF3A2AJT9 711 aaKnown RBP2.95□□□□□ -1.94
TRAPPC13-204ENST00000438419 ACOD1A6NK06 481 aa2.95□□□□□ -1.94
TRAPPC13-204ENST00000438419 TXNL1O43396 289 aa2.95□□□□□ -1.94
TRAPPC13-204ENST00000438419 SSX5O60225 188 aa2.95□□□□□ -1.94
TRAPPC13-204ENST00000438419 CXCL10P02778 98 aa2.95□□□□□ -1.94
TRAPPC13-204ENST00000438419 ZCCHC18P0CG32 403 aa2.95□□□□□ -1.94
TRAPPC13-204ENST00000438419 FCARP24071 287 aa2.95□□□□□ -1.94
TRAPPC13-204ENST00000438419 CHRNA3P32297 505 aa2.95□□□□□ -1.94
TRAPPC13-204ENST00000438419 PTGER3P43115 390 aa2.95□□□□□ -1.94
TRAPPC13-204ENST00000438419 MTIF2P46199 727 aaKnown RBP2.95□□□□□ -1.94
TRAPPC13-204ENST00000438419 ZFP36L2P47974 494 aaKnown RBP2.95□□□□□ -1.94
TRAPPC13-204ENST00000438419 CAMLGP49069 296 aa2.95□□□□□ -1.94
TRAPPC13-204ENST00000438419 ATP4BP51164 291 aa2.95□□□□□ -1.94
TRAPPC13-204ENST00000438419 TKTL1P51854 596 aa2.95□□□□□ -1.94
TRAPPC13-204ENST00000438419 POLR2FP61218 127 aaKnown RBP2.95□□□□□ -1.94
TRAPPC13-204ENST00000438419 CD300CQ08708 224 aa2.95□□□□□ -1.94
TRAPPC13-204ENST00000438419 FASTKQ14296 549 aaKnown RBP2.95□□□□□ -1.94
TRAPPC13-204ENST00000438419 MUC21Q5SSG8 566 aa2.95□□□□□ -1.94
TRAPPC13-204ENST00000438419 TEX35Q5T0J7 233 aa2.95□□□□□ -1.94
TRAPPC13-204ENST00000438419 DDI2Q5TDH0 399 aa2.95□□□□□ -1.94
TRAPPC13-204ENST00000438419 LIPKQ5VXJ0 399 aa2.95□□□□□ -1.94
TRAPPC13-204ENST00000438419 RBM43Q6ZSC3 357 aaKnown RBP2.95□□□□□ -1.94
TRAPPC13-204ENST00000438419 TMEM26Q6ZUK4 368 aa2.95□□□□□ -1.94
TRAPPC13-204ENST00000438419 ADGRD2Q7Z7M1 963 aa2.95□□□□□ -1.94
TRAPPC13-204ENST00000438419 ITIH5Q86UX2 942 aa2.95□□□□□ -1.94
TRAPPC13-204ENST00000438419 POM121L12Q8N7R1 296 aa2.95□□□□□ -1.94
TRAPPC13-204ENST00000438419 ICA1LQ8NDH6 482 aa2.95□□□□□ -1.94
TRAPPC13-204ENST00000438419 CNNM3Q8NE01 707 aa2.95□□□□□ -1.94
TRAPPC13-204ENST00000438419 GOLGA5Q8TBA6 731 aa2.95□□□□□ -1.94
TRAPPC13-204ENST00000438419 SSC4DQ8WTU2 575 aa2.95□□□□□ -1.94
TRAPPC13-204ENST00000438419 TMEM45BQ96B21 275 aa2.95□□□□□ -1.94
TRAPPC13-204ENST00000438419 DEFB118Q96PH6 123 aa2.95□□□□□ -1.94
TRAPPC13-204ENST00000438419 RBM24Q9BX46 236 aaKnown RBP2.95□□□□□ -1.94
TRAPPC13-204ENST00000438419 FTHL17Q9BXU8 183 aa2.95□□□□□ -1.94
TRAPPC13-204ENST00000438419 RAB17Q9H0T7 212 aa2.95□□□□□ -1.94
TRAPPC13-204ENST00000438419 TMEM231Q9H6L2 316 aa2.95□□□□□ -1.94
TRAPPC13-204ENST00000438419 NGBQ9NPG2 151 aa2.95□□□□□ -1.94
TRAPPC13-204ENST00000438419 DEPPQ9NTK1 212 aa2.95□□□□□ -1.94
TRAPPC13-204ENST00000438419 THYN1Q9P016 225 aa2.95□□□□□ -1.94
TRAPPC13-204ENST00000438419 ENTPD4Q9Y227 616 aa2.95□□□□□ -1.94
TRAPPC13-204ENST00000438419 MTF2Q9Y483 593 aaPredicted RBP2.95□□□□□ -1.94
TRAPPC13-204ENST00000438419 ATG4BQ9Y4P1 393 aa2.95□□□□□ -1.94
TRAPPC13-204ENST00000438419 NPC1L1Q9UHC9 1359 aa2.95□□□□□ -1.94
TRAPPC13-204ENST00000438419 TRGV8A0A0C4DH27 118 aa2.94□□□□□ -1.94
TRAPPC13-204ENST00000438419 LOC390937A0A1W2PQ73 354 aa2.94□□□□□ -1.94
TRAPPC13-204ENST00000438419 MEI4A8MW99 385 aa2.94□□□□□ -1.94
TRAPPC13-204ENST00000438419 K7EQG2 157 aa2.94□□□□□ -1.94
TRAPPC13-204ENST00000438419 FBP2O00757 339 aa2.94□□□□□ -1.94
TRAPPC13-204ENST00000438419 ADAM12O43184 909 aa2.94□□□□□ -1.94
TRAPPC13-204ENST00000438419 DUSP11O75319 330 aaKnown RBP2.94□□□□□ -1.94
TRAPPC13-204ENST00000438419 CSDE1O75534 798 aaKnown RBP2.94□□□□□ -1.94
TRAPPC13-204ENST00000438419 APRTP07741 180 aa2.94□□□□□ -1.94
TRAPPC13-204ENST00000438419 FHP07954 510 aa2.94□□□□□ -1.94
TRAPPC13-204ENST00000438419 HOXD4P09016 255 aaPredicted RBP2.94□□□□□ -1.94
TRAPPC13-204ENST00000438419 CAPN2P17655 700 aa2.94□□□□□ -1.94
TRAPPC13-204ENST00000438419 ARF4P18085 180 aaPredicted RBP2.94□□□□□ -1.94
TRAPPC13-204ENST00000438419 LMO2P25791 158 aa2.94□□□□□ -1.94
TRAPPC13-204ENST00000438419 PPP2R1AP30153 589 aa2.94□□□□□ -1.94
TRAPPC13-204ENST00000438419 RPS4XP62701 263 aaKnown RBP2.94□□□□□ -1.94
TRAPPC13-204ENST00000438419 NME3Q13232 169 aa2.94□□□□□ -1.94
TRAPPC13-204ENST00000438419 SLC17A1Q14916 467 aa2.94□□□□□ -1.94
TRAPPC13-204ENST00000438419 CEBPEQ15744 281 aa2.94□□□□□ -1.94
TRAPPC13-204ENST00000438419 CLPPQ16740 277 aaPredicted RBP2.94□□□□□ -1.94
TRAPPC13-204ENST00000438419 HIGD2BQ4VC39 106 aa2.94□□□□□ -1.94
TRAPPC13-204ENST00000438419 TCTEX1D4Q5JR98 221 aa2.94□□□□□ -1.94
TRAPPC13-204ENST00000438419 TCHHL1Q5QJ38 904 aaPredicted RBP2.94□□□□□ -1.94
TRAPPC13-204ENST00000438419 C1orf189Q5VU69 101 aa2.94□□□□□ -1.94
TRAPPC13-204ENST00000438419 IRGCQ6NXR0 463 aa2.94□□□□□ -1.94
TRAPPC13-204ENST00000438419 STEAP1BQ6NZ63 245 aa2.94□□□□□ -1.94
TRAPPC13-204ENST00000438419 TMUB2Q71RG4 321 aa2.94□□□□□ -1.94
TRAPPC13-204ENST00000438419 CATSPER4Q7RTX7 472 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms