RNA–Protein interactions for RNA: ENST00000437600.8

CUX1-206, Transcript of cut like homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CUX1, Length 3,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-206ENST00000437600 LINC00615Q96LM1 132 aaPredicted RBP8.97□□□□□ -0.97
CUX1-206ENST00000437600 COL21A1Q96P44 957 aa8.97□□□□□ -0.97
CUX1-206ENST00000437600 ALPK1Q96QP1 1244 aa8.97□□□□□ -0.97
CUX1-206ENST00000437600 OR5M11Q96RB7 305 aa8.97□□□□□ -0.97
CUX1-206ENST00000437600 OR51E2Q9H255 320 aa8.97□□□□□ -0.97
CUX1-206ENST00000437600 C6orf106Q9H6K1 298 aaPredicted RBP8.97□□□□□ -0.97
CUX1-206ENST00000437600 PHPT1Q9NRX4 125 aaPredicted RBP8.97□□□□□ -0.97
CUX1-206ENST00000437600 SCHIP1Q9P0W5 487 aaPredicted RBP8.97□□□□□ -0.97
CUX1-206ENST00000437600 CUL9Q8IWT3 2517 aa8.97□□□□□ -0.97
CUX1-206ENST00000437600 C17orf113A0A1B0GUU1 675 aa8.97□□□□□ -0.97
CUX1-206ENST00000437600 H3BN98 237 aa8.97□□□□□ -0.97
CUX1-206ENST00000437600 LRRTM2O43300 516 aa8.97□□□□□ -0.97
CUX1-206ENST00000437600 DNAJB6O75190 326 aa8.97□□□□□ -0.97
CUX1-206ENST00000437600 PTHP01270 115 aa8.97□□□□□ -0.97
CUX1-206ENST00000437600 ACADMP11310 421 aa8.97□□□□□ -0.97
CUX1-206ENST00000437600 ZNF12P17014 697 aa8.97□□□□□ -0.97
CUX1-206ENST00000437600 NDUFV2P19404 249 aa8.97□□□□□ -0.97
CUX1-206ENST00000437600 KELP23276 732 aa8.97□□□□□ -0.97
CUX1-206ENST00000437600 CNR2P34972 360 aa8.97□□□□□ -0.97
CUX1-206ENST00000437600 CLK1P49759 484 aaKnown RBP8.97□□□□□ -0.97
CUX1-206ENST00000437600 UBXN2BQ14CS0 331 aa8.97□□□□□ -0.97
CUX1-206ENST00000437600 MED22Q15528 200 aa8.97□□□□□ -0.97
CUX1-206ENST00000437600 PROX2Q3B8N5 592 aa8.97□□□□□ -0.97
CUX1-206ENST00000437600 C18orf63Q68DL7 685 aa8.97□□□□□ -0.97
CUX1-206ENST00000437600 ENPP7Q6UWV6 458 aa8.97□□□□□ -0.97
CUX1-206ENST00000437600 ZNF793Q6ZN11 406 aa8.97□□□□□ -0.97
CUX1-206ENST00000437600 DCUN1D3Q8IWE4 304 aa8.97□□□□□ -0.97
CUX1-206ENST00000437600 OR4N5Q8IXE1 308 aa8.97□□□□□ -0.97
CUX1-206ENST00000437600 KRT78Q8N1N4 520 aa8.97□□□□□ -0.97
CUX1-206ENST00000437600 FBXL6Q8N531 539 aa8.97□□□□□ -0.97
CUX1-206ENST00000437600 KIAA1958Q8N8K9 716 aa8.97□□□□□ -0.97
CUX1-206ENST00000437600 GPR32P1Q8NGA4 272 aa8.97□□□□□ -0.97
CUX1-206ENST00000437600 OR4E2Q8NGC2 313 aa8.97□□□□□ -0.97
CUX1-206ENST00000437600 OR5K2Q8NHB8 316 aa8.97□□□□□ -0.97
CUX1-206ENST00000437600 TEX101Q9BY14 249 aa8.97□□□□□ -0.97
CUX1-206ENST00000437600 SERHL2Q9H4I8 314 aa8.97□□□□□ -0.97
CUX1-206ENST00000437600 MVB12BQ9H7P6 319 aa8.97□□□□□ -0.97
CUX1-206ENST00000437600 NMNAT1Q9HAN9 279 aaPredicted RBP8.97□□□□□ -0.97
CUX1-206ENST00000437600 IMPAD1Q9NX62 359 aa8.97□□□□□ -0.97
CUX1-206ENST00000437600 PADI2Q9Y2J8 665 aa8.97□□□□□ -0.97
CUX1-206ENST00000437600 TCRBV21S2A2A0A5A6 115 aa8.96□□□□□ -0.97
CUX1-206ENST00000437600 KRBA1A5PL33 1030 aa8.96□□□□□ -0.97
CUX1-206ENST00000437600 M0R082 166 aa8.96□□□□□ -0.97
CUX1-206ENST00000437600 KMOO15229 486 aa8.96□□□□□ -0.97
CUX1-206ENST00000437600 OR10H3O60404 316 aa8.96□□□□□ -0.97
CUX1-206ENST00000437600 ENDOUP21128 410 aaKnown RBP8.96□□□□□ -0.97
CUX1-206ENST00000437600 GADD45AP24522 165 aa8.96□□□□□ -0.97
CUX1-206ENST00000437600 TRIM23P36406 574 aa8.96□□□□□ -0.97
CUX1-206ENST00000437600 CCT3P49368 545 aaKnown RBP8.96□□□□□ -0.97
CUX1-206ENST00000437600 EEF1A2Q05639 463 aaKnown RBP8.96□□□□□ -0.97
CUX1-206ENST00000437600 TUBA3CQ13748 450 aa8.96□□□□□ -0.97
CUX1-206ENST00000437600 KEAP1Q14145 624 aa8.96□□□□□ -0.97
CUX1-206ENST00000437600 TEAD4Q15561 434 aa8.96□□□□□ -0.97
CUX1-206ENST00000437600 NDUFAF5Q5TEU4 345 aa8.96□□□□□ -0.97
CUX1-206ENST00000437600 MSANTD1Q6ZTZ1 278 aa8.96□□□□□ -0.97
CUX1-206ENST00000437600 ADCK1Q86TW2 530 aa8.96□□□□□ -0.97
CUX1-206ENST00000437600 RLN3Q8WXF3 142 aa8.96□□□□□ -0.97
CUX1-206ENST00000437600 CHCHD6Q9BRQ6 235 aa8.96□□□□□ -0.97
CUX1-206ENST00000437600 DPH7Q9BTV6 452 aa8.96□□□□□ -0.97
CUX1-206ENST00000437600 MENTQ9BUN1 341 aa8.96□□□□□ -0.97
CUX1-206ENST00000437600 C1QTNF2Q9BXJ5 285 aa8.96□□□□□ -0.97
CUX1-206ENST00000437600 C6orf62Q9GZU0 229 aaPredicted RBP8.96□□□□□ -0.97
CUX1-206ENST00000437600 DUSP12Q9UNI6 340 aa8.96□□□□□ -0.97
CUX1-206ENST00000437600 GPC6Q9Y625 555 aaPredicted RBP8.96□□□□□ -0.97
CUX1-206ENST00000437600 SEC16AO15027 2179 aa8.96□□□□□ -0.98
CUX1-206ENST00000437600 WWP2O00308 870 aa8.96□□□□□ -0.98
CUX1-206ENST00000437600 HMGN4O00479 90 aa8.96□□□□□ -0.98
CUX1-206ENST00000437600 PLRG1O43660 514 aaKnown RBP8.96□□□□□ -0.98
CUX1-206ENST00000437600 SLC28A2O43868 658 aa8.96□□□□□ -0.98
CUX1-206ENST00000437600 SSR2P43308 183 aa8.96□□□□□ -0.98
CUX1-206ENST00000437600 SEPHS1P49903 392 aa8.96□□□□□ -0.98
CUX1-206ENST00000437600 TOP3AQ13472 1001 aaPredicted RBP8.96□□□□□ -0.98
CUX1-206ENST00000437600 LASP1Q14847 261 aaKnown RBP8.96□□□□□ -0.98
CUX1-206ENST00000437600 INAQ16352 499 aa8.96□□□□□ -0.98
CUX1-206ENST00000437600 TCTN3Q6NUS6 607 aa8.96□□□□□ -0.98
CUX1-206ENST00000437600 CAMKMTQ7Z624 323 aa8.96□□□□□ -0.98
CUX1-206ENST00000437600 ZNF605Q86T29 641 aa8.96□□□□□ -0.98
CUX1-206ENST00000437600 STX19Q8N4C7 294 aa8.96□□□□□ -0.98
CUX1-206ENST00000437600 DEFB119Q8N690 84 aa8.96□□□□□ -0.98
CUX1-206ENST00000437600 B3GNT7Q8NFL0 401 aa8.96□□□□□ -0.98
CUX1-206ENST00000437600 FBLIM1Q8WUP2 373 aa8.96□□□□□ -0.98
CUX1-206ENST00000437600 AIF1LQ9BQI0 150 aa8.96□□□□□ -0.98
CUX1-206ENST00000437600 APOOQ9BUR5 198 aa8.96□□□□□ -0.98
CUX1-206ENST00000437600 MYNNQ9NPC7 610 aa8.96□□□□□ -0.98
CUX1-206ENST00000437600 QPCTLQ9NXS2 382 aa8.96□□□□□ -0.98
CUX1-206ENST00000437600 IL20RAQ9UHF4 553 aa8.96□□□□□ -0.98
CUX1-206ENST00000437600 ATG4BQ9Y4P1 393 aa8.96□□□□□ -0.98
CUX1-206ENST00000437600 PCDHGA2Q9Y5H1 932 aa8.96□□□□□ -0.98
CUX1-206ENST00000437600 SMIM30A4D0T7 59 aa8.95□□□□□ -0.98
CUX1-206ENST00000437600 TRIM64BA6NI03 449 aa8.95□□□□□ -0.98
CUX1-206ENST00000437600 EFCAB9A8MZ26 197 aa8.95□□□□□ -0.98
CUX1-206ENST00000437600 ADAMDEC1O15204 470 aa8.95□□□□□ -0.98
CUX1-206ENST00000437600 ERI3O43414 337 aaKnown RBP8.95□□□□□ -0.98
CUX1-206ENST00000437600 JUNDP17535 347 aa8.95□□□□□ -0.98
CUX1-206ENST00000437600 DDCP20711 480 aa8.95□□□□□ -0.98
CUX1-206ENST00000437600 CHMP24386 653 aa8.95□□□□□ -0.98
CUX1-206ENST00000437600 TNFRSF4P43489 277 aa8.95□□□□□ -0.98
CUX1-206ENST00000437600 CCR8P51685 355 aa8.95□□□□□ -0.98
CUX1-206ENST00000437600 CSNK1G2P78368 415 aa8.95□□□□□ -0.98
CUX1-206ENST00000437600 CCINQ13939 588 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms