RNA–Protein interactions for RNA: ENST00000436412.1

NIF3L1-208, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 3

Gene NIF3L1, Length 479 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-208ENST00000436412 DNASE1L1P49184 302 aa7.71□□□□□ -1.18
NIF3L1-208ENST00000436412 AP1S2P56377 157 aa7.71□□□□□ -1.18
NIF3L1-208ENST00000436412 RAB8AP61006 207 aa7.71□□□□□ -1.18
NIF3L1-208ENST00000436412 SARNPP82979 210 aaKnown RBP7.71□□□□□ -1.18
NIF3L1-208ENST00000436412 SLC13A2Q13183 592 aa7.71□□□□□ -1.18
NIF3L1-208ENST00000436412 CTBP1Q13363 440 aa7.71□□□□□ -1.18
NIF3L1-208ENST00000436412 THOC5Q13769 683 aaKnown RBP7.71□□□□□ -1.18
NIF3L1-208ENST00000436412 BMPR2Q13873 1038 aa7.71□□□□□ -1.18
NIF3L1-208ENST00000436412 RCN2Q14257 317 aa7.71□□□□□ -1.18
NIF3L1-208ENST00000436412 CSHL1Q14406 222 aa7.71□□□□□ -1.18
NIF3L1-208ENST00000436412 SIX1Q15475 284 aaPredicted RBP7.71□□□□□ -1.18
NIF3L1-208ENST00000436412 MPEG1Q2M385 716 aa7.71□□□□□ -1.18
NIF3L1-208ENST00000436412 ACSF3Q4G176 576 aaPredicted RBP7.71□□□□□ -1.18
NIF3L1-208ENST00000436412 SLC22A10Q63ZE4 541 aa7.71□□□□□ -1.18
NIF3L1-208ENST00000436412 UGT3A1Q6NUS8 523 aa7.71□□□□□ -1.18
NIF3L1-208ENST00000436412 C16orf47Q6ZP98 133 aaPredicted RBP7.71□□□□□ -1.18
NIF3L1-208ENST00000436412 PM20D2Q8IYS1 436 aa7.71□□□□□ -1.18
NIF3L1-208ENST00000436412 DND1Q8IYX4 353 aaKnown RBP7.71□□□□□ -1.18
NIF3L1-208ENST00000436412 LRRC25Q8N386 305 aaPredicted RBP7.71□□□□□ -1.18
NIF3L1-208ENST00000436412 LIX1Q8N485 282 aa7.71□□□□□ -1.18
NIF3L1-208ENST00000436412 TC2NQ8N9U0 490 aa7.71□□□□□ -1.18
NIF3L1-208ENST00000436412 TNIP2Q8NFZ5 429 aa7.71□□□□□ -1.18
NIF3L1-208ENST00000436412 OR56A3Q8NH54 315 aa7.71□□□□□ -1.18
NIF3L1-208ENST00000436412 LINC01560Q8TB33 94 aa7.71□□□□□ -1.18
NIF3L1-208ENST00000436412 ATL1Q8WXF7 558 aa7.71□□□□□ -1.18
NIF3L1-208ENST00000436412 NTNG2Q96CW9 530 aa7.71□□□□□ -1.18
NIF3L1-208ENST00000436412 FAR2Q96K12 515 aa7.71□□□□□ -1.18
NIF3L1-208ENST00000436412 AIF1LQ9BQI0 150 aa7.71□□□□□ -1.18
NIF3L1-208ENST00000436412 ZCCHC4Q9H5U6 513 aa7.71□□□□□ -1.18
NIF3L1-208ENST00000436412 ZNF703Q9H7S9 590 aaPredicted RBP7.71□□□□□ -1.18
NIF3L1-208ENST00000436412 LIN28AQ9H9Z2 209 aaKnown RBP7.71□□□□□ -1.18
NIF3L1-208ENST00000436412 PELI2Q9HAT8 420 aa7.71□□□□□ -1.18
NIF3L1-208ENST00000436412 PRTFDC1Q9NRG1 225 aa7.71□□□□□ -1.18
NIF3L1-208ENST00000436412 SYBUQ9NX95 663 aa7.71□□□□□ -1.18
NIF3L1-208ENST00000436412 JKAMPQ9P055 326 aa7.71□□□□□ -1.18
NIF3L1-208ENST00000436412 TRMT6Q9UJA5 497 aaKnown RBP7.71□□□□□ -1.18
NIF3L1-208ENST00000436412 ADAM21Q9UKJ8 722 aa7.71□□□□□ -1.18
NIF3L1-208ENST00000436412 EIF3LQ9Y262 564 aaKnown RBP7.71□□□□□ -1.18
NIF3L1-208ENST00000436412 CLDN16Q9Y5I7 305 aa7.71□□□□□ -1.18
NIF3L1-208ENST00000436412 MAD1L1Q9Y6D9 718 aa7.71□□□□□ -1.18
NIF3L1-208ENST00000436412 EPN1Q9Y6I3 576 aaPredicted RBP7.71□□□□□ -1.18
NIF3L1-208ENST00000436412 PABPN1LA6NDY0 278 aaKnown RBP7.7□□□□□ -1.18
NIF3L1-208ENST00000436412 CASKO14936 926 aa7.7□□□□□ -1.18
NIF3L1-208ENST00000436412 CRLF1O75462 422 aa7.7□□□□□ -1.18
NIF3L1-208ENST00000436412 IFNA16P05015 189 aa7.7□□□□□ -1.18
NIF3L1-208ENST00000436412 CCL3P10147 92 aa7.7□□□□□ -1.18
NIF3L1-208ENST00000436412 IFNGR1P15260 489 aa7.7□□□□□ -1.18
NIF3L1-208ENST00000436412 TPSB2P20231 275 aa7.7□□□□□ -1.18
NIF3L1-208ENST00000436412 CTSSP25774 331 aa7.7□□□□□ -1.18
NIF3L1-208ENST00000436412 HPDP32754 393 aaPredicted RBP7.7□□□□□ -1.18
NIF3L1-208ENST00000436412 BUD31P41223 144 aaPredicted RBP7.7□□□□□ -1.18
NIF3L1-208ENST00000436412 HNF4AP41235 474 aa7.7□□□□□ -1.18
NIF3L1-208ENST00000436412 ZNF136P52737 540 aa7.7□□□□□ -1.18
NIF3L1-208ENST00000436412 RAB38P57729 211 aa7.7□□□□□ -1.18
NIF3L1-208ENST00000436412 STXBP1P61764 594 aaKnown RBP7.7□□□□□ -1.18
NIF3L1-208ENST00000436412 KCNJ2P63252 427 aa7.7□□□□□ -1.18
NIF3L1-208ENST00000436412 BASP1P80723 227 aaKnown RBP7.7□□□□□ -1.18
NIF3L1-208ENST00000436412 CCZ1BP86790 482 aa7.7□□□□□ -1.18
NIF3L1-208ENST00000436412 CCZ1P86791 482 aaPredicted RBP7.7□□□□□ -1.18
NIF3L1-208ENST00000436412 REEP5Q00765 189 aa7.7□□□□□ -1.18
NIF3L1-208ENST00000436412 EFTUD2Q15029 972 aaKnown RBP eCLIP7.7□□□□□ -1.182e-11■■■■■ 41.9
NIF3L1-208ENST00000436412 TPSAB1Q15661 275 aa7.7□□□□□ -1.18
NIF3L1-208ENST00000436412 PIGGQ5H8A4 983 aa7.7□□□□□ -1.18
NIF3L1-208ENST00000436412 LCE5AQ5TCM9 118 aa7.7□□□□□ -1.18
NIF3L1-208ENST00000436412 HLA-DQA1Q5Y7H0 255 aa7.7□□□□□ -1.18
NIF3L1-208ENST00000436412 NSUN5P2Q63ZY6 315 aa7.7□□□□□ -1.18
NIF3L1-208ENST00000436412 ZNF549Q6P9A3 640 aa7.7□□□□□ -1.18
NIF3L1-208ENST00000436412 MBOAT1Q6ZNC8 495 aa7.7□□□□□ -1.18
NIF3L1-208ENST00000436412 CPNE9Q8IYJ1 553 aa7.7□□□□□ -1.18
NIF3L1-208ENST00000436412 MYO1HQ8N1T3 1032 aa7.7□□□□□ -1.18
NIF3L1-208ENST00000436412 CIARTQ8N365 385 aaPredicted RBP7.7□□□□□ -1.18
NIF3L1-208ENST00000436412 SLC15A4Q8N697 577 aa7.7□□□□□ -1.18
NIF3L1-208ENST00000436412 ANKRD53Q8N9V6 530 aa7.7□□□□□ -1.18
NIF3L1-208ENST00000436412 TTLQ8NG68 377 aa7.7□□□□□ -1.18
NIF3L1-208ENST00000436412 CALML6Q8TD86 181 aa7.7□□□□□ -1.18
NIF3L1-208ENST00000436412 PAQR8Q8TEZ7 354 aa7.7□□□□□ -1.18
NIF3L1-208ENST00000436412 PTPMT1Q8WUK0 201 aaPredicted RBP7.7□□□□□ -1.18
NIF3L1-208ENST00000436412 EEF1AKMT1Q8WVE0 214 aa7.7□□□□□ -1.18
NIF3L1-208ENST00000436412 SLC5A11Q8WWX8 675 aa7.7□□□□□ -1.18
NIF3L1-208ENST00000436412 HES6Q96HZ4 224 aa7.7□□□□□ -1.18
NIF3L1-208ENST00000436412 Q96MF0 132 aa7.7□□□□□ -1.18
NIF3L1-208ENST00000436412 TRIM54Q9BYV2 358 aa7.7□□□□□ -1.18
NIF3L1-208ENST00000436412 KLHL31Q9H511 634 aa7.7□□□□□ -1.18
NIF3L1-208ENST00000436412 SH2D2AQ9NP31 389 aa7.7□□□□□ -1.18
NIF3L1-208ENST00000436412 SEMA4BQ9NPR2 832 aaPredicted RBP7.7□□□□□ -1.18
NIF3L1-208ENST00000436412 ARL15Q9NXU5 204 aa7.7□□□□□ -1.18
NIF3L1-208ENST00000436412 CNIH4Q9P003 139 aa7.7□□□□□ -1.18
NIF3L1-208ENST00000436412 TRPS1Q9UHF7 1281 aa7.7□□□□□ -1.18
NIF3L1-208ENST00000436412 MED12LQ86YW9 2145 aa7.7□□□□□ -1.18
NIF3L1-208ENST00000436412 MGAM2Q2M2H8 2515 aa7.7□□□□□ -1.18
NIF3L1-208ENST00000436412 KIAA1549Q9HCM3 1950 aa7.7□□□□□ -1.18
NIF3L1-208ENST00000436412 A0A1W2PPR1 153 aa7.69□□□□□ -1.18
NIF3L1-208ENST00000436412 SH3D21A4FU49 640 aa7.69□□□□□ -1.18
NIF3L1-208ENST00000436412 CD8B2A6NJW9 211 aa7.69□□□□□ -1.18
NIF3L1-208ENST00000436412 EEF1E1-BLOC1S5C9J1V9 151 aa7.69□□□□□ -1.18
NIF3L1-208ENST00000436412 SMAD7O15105 426 aaKnown RBP7.69□□□□□ -1.18
NIF3L1-208ENST00000436412 EEF1E1O43324 174 aaKnown RBP7.69□□□□□ -1.18
NIF3L1-208ENST00000436412 B3GALT2O43825 422 aa7.69□□□□□ -1.18
NIF3L1-208ENST00000436412 CTNSO60931 367 aa7.69□□□□□ -1.18
NIF3L1-208ENST00000436412 C8BP07358 591 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms