RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 TGM3Q08188 693 aa9.85□□□□□ -0.83
CD44-210ENST00000434472 ENPP2Q13822 863 aa9.85□□□□□ -0.83
CD44-210ENST00000434472 SEC23BQ15437 767 aa9.85□□□□□ -0.83
CD44-210ENST00000434472 MED22Q15528 200 aa9.85□□□□□ -0.83
CD44-210ENST00000434472 SYPL1Q16563 259 aa9.85□□□□□ -0.83
CD44-210ENST00000434472 TSTQ16762 297 aaKnown RBP9.85□□□□□ -0.83
CD44-210ENST00000434472 DUSP6Q16828 381 aa9.85□□□□□ -0.83
CD44-210ENST00000434472 SLC25A30Q5SVS4 291 aa9.85□□□□□ -0.83
CD44-210ENST00000434472 MFSD4BQ5TF39 518 aa9.85□□□□□ -0.83
CD44-210ENST00000434472 ZNF776Q68DI1 518 aaPredicted RBP9.85□□□□□ -0.83
CD44-210ENST00000434472 GET4Q7L5D6 327 aaPredicted RBP9.85□□□□□ -0.83
CD44-210ENST00000434472 SFTPA1Q8IWL2 248 aa9.85□□□□□ -0.83
CD44-210ENST00000434472 GJD3Q8N144 294 aa9.85□□□□□ -0.83
CD44-210ENST00000434472 OR9Q1Q8NGQ5 310 aa9.85□□□□□ -0.83
CD44-210ENST00000434472 SUN3Q8TAQ9 357 aa9.85□□□□□ -0.83
CD44-210ENST00000434472 PIK3R3Q92569 461 aa9.85□□□□□ -0.83
CD44-210ENST00000434472 TRNT1Q96Q11 434 aaKnown RBP9.85□□□□□ -0.83
CD44-210ENST00000434472 TREX2Q9BQ50 279 aaPredicted RBP9.85□□□□□ -0.83
CD44-210ENST00000434472 C17orf62Q9BQA9 187 aa9.85□□□□□ -0.83
CD44-210ENST00000434472 CHCHD6Q9BRQ6 235 aa9.85□□□□□ -0.83
CD44-210ENST00000434472 TMEM106CQ9BVX2 250 aa9.85□□□□□ -0.83
CD44-210ENST00000434472 SARGQ9BW04 601 aa9.85□□□□□ -0.83
CD44-210ENST00000434472 MND1Q9BWT6 205 aa9.85□□□□□ -0.83
CD44-210ENST00000434472 C1QTNF2Q9BXJ5 285 aa9.85□□□□□ -0.83
CD44-210ENST00000434472 PINK1Q9BXM7 581 aa9.85□□□□□ -0.83
CD44-210ENST00000434472 POLDIP3Q9BY77 421 aaKnown RBP9.85□□□□□ -0.83
CD44-210ENST00000434472 C6orf62Q9GZU0 229 aaPredicted RBP9.85□□□□□ -0.83
CD44-210ENST00000434472 OSGEPL1Q9H4B0 414 aa9.85□□□□□ -0.83
CD44-210ENST00000434472 SERHL2Q9H4I8 314 aa9.85□□□□□ -0.83
CD44-210ENST00000434472 C11orf16Q9NQ32 467 aa9.85□□□□□ -0.83
CD44-210ENST00000434472 IMP3Q9NV31 184 aaKnown RBP9.85□□□□□ -0.83
CD44-210ENST00000434472 LYARQ9NX58 379 aaKnown RBP9.85□□□□□ -0.83
CD44-210ENST00000434472 CALML5Q9NZT1 146 aa9.85□□□□□ -0.83
CD44-210ENST00000434472 A4GNTQ9UNA3 340 aa9.85□□□□□ -0.83
CD44-210ENST00000434472 DOLKQ9UPQ8 538 aa9.85□□□□□ -0.83
CD44-210ENST00000434472 ENTPD4Q9Y227 616 aa9.85□□□□□ -0.83
CD44-210ENST00000434472 KLHL20Q9Y2M5 609 aa9.85□□□□□ -0.83
CD44-210ENST00000434472 SNTNA6NMZ2 147 aa9.85□□□□□ -0.83
CD44-210ENST00000434472 M0R129 80 aa9.85□□□□□ -0.83
CD44-210ENST00000434472 SNX4O95219 450 aa9.85□□□□□ -0.83
CD44-210ENST00000434472 FHP07954 510 aa9.85□□□□□ -0.83
CD44-210ENST00000434472 CSNK2A2P19784 350 aaPredicted RBP9.85□□□□□ -0.83
CD44-210ENST00000434472 ENDOUP21128 410 aaKnown RBP9.85□□□□□ -0.83
CD44-210ENST00000434472 HIST1H1TP22492 207 aaPredicted RBP9.85□□□□□ -0.83
CD44-210ENST00000434472 IFNA8P32881 189 aa9.85□□□□□ -0.83
CD44-210ENST00000434472 GRK5P34947 590 aa9.85□□□□□ -0.83
CD44-210ENST00000434472 ETV6P41212 452 aa9.85□□□□□ -0.83
CD44-210ENST00000434472 TARDBPQ13148 414 aaKnown RBP eCLIP9.85□□□□□ -0.83
CD44-210ENST00000434472 CBX3Q13185 183 aa9.85□□□□□ -0.83
CD44-210ENST00000434472 SLAMF1Q13291 335 aa9.85□□□□□ -0.83
CD44-210ENST00000434472 C1DQ13901 141 aaKnown RBP9.85□□□□□ -0.83
CD44-210ENST00000434472 MLF2Q15773 248 aaPredicted RBP9.85□□□□□ -0.83
CD44-210ENST00000434472 TANGO2Q6ICL3 276 aa9.85□□□□□ -0.83
CD44-210ENST00000434472 MRM1Q6IN84 353 aaKnown RBP9.85□□□□□ -0.83
CD44-210ENST00000434472 FAM180BQ6P0A1 224 aa9.85□□□□□ -0.83
CD44-210ENST00000434472 VITQ6UXI7 678 aa9.85□□□□□ -0.83
CD44-210ENST00000434472 SZRD1Q7Z422 152 aa9.85□□□□□ -0.83
CD44-210ENST00000434472 ADGRD2Q7Z7M1 963 aa9.85□□□□□ -0.83
CD44-210ENST00000434472 SLC22A16Q86VW1 577 aa9.85□□□□□ -0.83
CD44-210ENST00000434472 LYSMD2Q8IV50 215 aa9.85□□□□□ -0.83
CD44-210ENST00000434472 FAM26EQ8N5C1 309 aa9.85□□□□□ -0.83
CD44-210ENST00000434472 MFSD9Q8NBP5 474 aa9.85□□□□□ -0.83
CD44-210ENST00000434472 OR2L5Q8NG80 312 aa9.85□□□□□ -0.83
CD44-210ENST00000434472 PRRC1Q96M27 445 aa9.85□□□□□ -0.83
CD44-210ENST00000434472 CDADC1Q9BWV3 514 aa9.85□□□□□ -0.83
CD44-210ENST00000434472 TAPBPLQ9BX59 468 aa9.85□□□□□ -0.83
CD44-210ENST00000434472 BTBD1Q9H0C5 482 aa9.85□□□□□ -0.83
CD44-210ENST00000434472 C3orf14Q9HBI5 128 aa9.85□□□□□ -0.83
CD44-210ENST00000434472 C5AR2Q9P296 337 aa9.85□□□□□ -0.83
CD44-210ENST00000434472 PCDH10Q9P2E7 1040 aa9.85□□□□□ -0.83
CD44-210ENST00000434472 SEC14L4Q9UDX3 406 aa9.85□□□□□ -0.83
CD44-210ENST00000434472 KLHL3Q9UH77 587 aa9.85□□□□□ -0.83
CD44-210ENST00000434472 HCN2Q9UL51 889 aa9.85□□□□□ -0.83
CD44-210ENST00000434472 SNX7Q9UNH6 387 aa9.85□□□□□ -0.83
CD44-210ENST00000434472 SLC17A4Q9Y2C5 497 aa9.85□□□□□ -0.83
CD44-210ENST00000434472 WDR37Q9Y2I8 494 aa9.85□□□□□ -0.83
CD44-210ENST00000434472 ASB4Q9Y574 426 aa9.85□□□□□ -0.83
CD44-210ENST00000434472 OR1A2Q9Y585 309 aa9.85□□□□□ -0.83
CD44-210ENST00000434472 PRR19A6NJB7 356 aa9.84□□□□□ -0.83
CD44-210ENST00000434472 PDZK1P1A8MUH7 402 aa9.84□□□□□ -0.83
CD44-210ENST00000434472 SYT5O00445 386 aa9.84□□□□□ -0.83
CD44-210ENST00000434472 EMC8O43402 210 aa9.84□□□□□ -0.83
CD44-210ENST00000434472 ERI3O43414 337 aaKnown RBP9.84□□□□□ -0.83
CD44-210ENST00000434472 ASNA1O43681 348 aa9.84□□□□□ -0.83
CD44-210ENST00000434472 PRICKLE3O43900 615 aaPredicted RBP9.84□□□□□ -0.83
CD44-210ENST00000434472 KIAA0513O60268 411 aa9.84□□□□□ -0.83
CD44-210ENST00000434472 LGI1O95970 557 aa9.84□□□□□ -0.83
CD44-210ENST00000434472 ACADMP11310 421 aa9.84□□□□□ -0.83
CD44-210ENST00000434472 CD72P21854 359 aa9.84□□□□□ -0.83
CD44-210ENST00000434472 ATP5A1P25705 553 aaKnown RBP9.84□□□□□ -0.83
CD44-210ENST00000434472 TIE1P35590 1138 aa9.84□□□□□ -0.83
CD44-210ENST00000434472 BCL6P41182 706 aa9.84□□□□□ -0.83
CD44-210ENST00000434472 TNFRSF4P43489 277 aa9.84□□□□□ -0.83
CD44-210ENST00000434472 DEFA1P59665 94 aa9.84□□□□□ -0.83
CD44-210ENST00000434472 DEFA3P59666 94 aa9.84□□□□□ -0.83
CD44-210ENST00000434472 STXBP1P61764 594 aaKnown RBP9.84□□□□□ -0.83
CD44-210ENST00000434472 COPZ1P61923 177 aa9.84□□□□□ -0.83
CD44-210ENST00000434472 PRR5P85299 388 aa9.84□□□□□ -0.83
CD44-210ENST00000434472 UAP1L1Q3KQV9 507 aa9.84□□□□□ -0.83
CD44-210ENST00000434472 KLHL22Q53GT1 634 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms