RNA–Protein interactions for RNA: ENST00000432306.5

VTI1A-202, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best) BASIC

Gene VTI1A, Length 1,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-202ENST00000432306 PRSS56P0CW18 603 aa7.66□□□□□ -1.18
VTI1A-202ENST00000432306 POLR2CP19387 275 aaPredicted RBP7.66□□□□□ -1.18
VTI1A-202ENST00000432306 PPIBP23284 216 aaKnown RBP7.66□□□□□ -1.18
VTI1A-202ENST00000432306 IGFBP6P24592 240 aaPredicted RBP7.66□□□□□ -1.18
VTI1A-202ENST00000432306 IFNA8P32881 189 aa7.66□□□□□ -1.18
VTI1A-202ENST00000432306 LIMS1P48059 325 aa7.66□□□□□ -1.18
VTI1A-202ENST00000432306 RORCP51449 518 aa7.66□□□□□ -1.18
VTI1A-202ENST00000432306 CRYBA2P53672 197 aa7.66□□□□□ -1.18
VTI1A-202ENST00000432306 SRSF11Q05519 484 aaKnown RBP7.66□□□□□ -1.18
VTI1A-202ENST00000432306 ST3GAL4Q11206 333 aa7.66□□□□□ -1.18
VTI1A-202ENST00000432306 POU4F3Q15319 338 aa7.66□□□□□ -1.18
VTI1A-202ENST00000432306 BAK1Q16611 211 aa7.66□□□□□ -1.18
VTI1A-202ENST00000432306 UPP1Q16831 310 aa7.66□□□□□ -1.18
VTI1A-202ENST00000432306 TMEM177Q53S58 311 aa7.66□□□□□ -1.18
VTI1A-202ENST00000432306 TCTE1Q5JU00 501 aa7.66□□□□□ -1.18
VTI1A-202ENST00000432306 TMEM201Q5SNT2 666 aa7.66□□□□□ -1.18
VTI1A-202ENST00000432306 MEDAGQ5VYS4 303 aa7.66□□□□□ -1.18
VTI1A-202ENST00000432306 PSAPL1Q6NUJ1 521 aa7.66□□□□□ -1.18
VTI1A-202ENST00000432306 MTFR2Q6P444 385 aa7.66□□□□□ -1.18
VTI1A-202ENST00000432306 HSDL2Q6YN16 418 aa7.66□□□□□ -1.18
VTI1A-202ENST00000432306 ZNF782Q6ZMW2 699 aaPredicted RBP7.66□□□□□ -1.18
VTI1A-202ENST00000432306 GLT6D1Q7Z4J2 308 aa7.66□□□□□ -1.18
VTI1A-202ENST00000432306 CAMKMTQ7Z624 323 aa7.66□□□□□ -1.18
VTI1A-202ENST00000432306 RABEPKQ7Z6M1 372 aa7.66□□□□□ -1.18
VTI1A-202ENST00000432306 TMCO2Q7Z6W1 182 aaPredicted RBP7.66□□□□□ -1.18
VTI1A-202ENST00000432306 ZNF605Q86T29 641 aa7.66□□□□□ -1.18
VTI1A-202ENST00000432306 SULF2Q8IWU5 870 aa7.66□□□□□ -1.18
VTI1A-202ENST00000432306 PIANPQ8IYJ0 282 aa7.66□□□□□ -1.18
VTI1A-202ENST00000432306 STX19Q8N4C7 294 aa7.66□□□□□ -1.18
VTI1A-202ENST00000432306 MDGA1Q8NFP4 955 aa7.66□□□□□ -1.18
VTI1A-202ENST00000432306 IFI44Q8TCB0 444 aa7.66□□□□□ -1.18
VTI1A-202ENST00000432306 THAP4Q8WY91 577 aa7.66□□□□□ -1.18
VTI1A-202ENST00000432306 CMTM7Q96FZ5 175 aa7.66□□□□□ -1.18
VTI1A-202ENST00000432306 MAPKAP1Q9BPZ7 522 aa7.66□□□□□ -1.18
VTI1A-202ENST00000432306 TTYH2Q9BSA4 534 aa7.66□□□□□ -1.18
VTI1A-202ENST00000432306 MED18Q9BUE0 208 aa7.66□□□□□ -1.18
VTI1A-202ENST00000432306 NSUN3Q9H649 340 aaKnown RBP7.66□□□□□ -1.18
VTI1A-202ENST00000432306 RNF167Q9H6Y7 350 aa7.66□□□□□ -1.18
VTI1A-202ENST00000432306 RNF121Q9H920 327 aa7.66□□□□□ -1.18
VTI1A-202ENST00000432306 NMUR1Q9HB89 426 aa7.66□□□□□ -1.18
VTI1A-202ENST00000432306 POLE3Q9NRF9 147 aa7.66□□□□□ -1.18
VTI1A-202ENST00000432306 THSD1Q9NS62 852 aa7.66□□□□□ -1.18
VTI1A-202ENST00000432306 TMLHEQ9NVH6 421 aa7.66□□□□□ -1.18
VTI1A-202ENST00000432306 FAM120CQ9NX05 1096 aaKnown RBP7.66□□□□□ -1.18
VTI1A-202ENST00000432306 ERVK13-1Q9NX77 482 aa7.66□□□□□ -1.18
VTI1A-202ENST00000432306 MIOSQ9NXC5 875 aa7.66□□□□□ -1.18
VTI1A-202ENST00000432306 BACE2Q9Y5Z0 518 aa7.66□□□□□ -1.18
VTI1A-202ENST00000432306 CFAP20Q9Y6A4 193 aaKnown RBP7.66□□□□□ -1.18
VTI1A-202ENST00000432306 KCNE1BA0A087WTH5 132 aa7.66□□□□□ -1.18
VTI1A-202ENST00000432306 A0A0B4J293 547 aa7.66□□□□□ -1.18
VTI1A-202ENST00000432306 A0A1W2PQ09 198 aa7.66□□□□□ -1.18
VTI1A-202ENST00000432306 LINC00862A6NCI5 91 aa7.66□□□□□ -1.18
VTI1A-202ENST00000432306 MYO1GB0I1T2 1018 aa7.66□□□□□ -1.18
VTI1A-202ENST00000432306 H7BY64 318 aa7.66□□□□□ -1.18
VTI1A-202ENST00000432306 CLIC1O00299 241 aa7.66□□□□□ -1.18
VTI1A-202ENST00000432306 RFXANKO14593 260 aa7.66□□□□□ -1.18
VTI1A-202ENST00000432306 SMAD6O43541 496 aaKnown RBP7.66□□□□□ -1.18
VTI1A-202ENST00000432306 HCN1O60741 890 aa7.66□□□□□ -1.18
VTI1A-202ENST00000432306 CYP7B1O75881 506 aa7.66□□□□□ -1.18
VTI1A-202ENST00000432306 ZNF682O95780 498 aa7.66□□□□□ -1.18
VTI1A-202ENST00000432306 GSTM1P09488 218 aa7.66□□□□□ -1.18
VTI1A-202ENST00000432306 SMIM10L2AP0DMW4 78 aa7.66□□□□□ -1.18
VTI1A-202ENST00000432306 SMIM10L2BP0DMW5 78 aa7.66□□□□□ -1.18
VTI1A-202ENST00000432306 TYMPP19971 482 aa7.66□□□□□ -1.18
VTI1A-202ENST00000432306 MAGP20916 626 aa7.66□□□□□ -1.18
VTI1A-202ENST00000432306 PRPS1L1P21108 318 aa7.66□□□□□ -1.18
VTI1A-202ENST00000432306 MYL9P24844 172 aa7.66□□□□□ -1.18
VTI1A-202ENST00000432306 HOXD9P28356 352 aaPredicted RBP7.66□□□□□ -1.18
VTI1A-202ENST00000432306 GRNP28799 593 aaKnown RBP7.66□□□□□ -1.18
VTI1A-202ENST00000432306 PCGF2P35227 344 aa7.66□□□□□ -1.18
VTI1A-202ENST00000432306 CDKN2CP42773 168 aa7.66□□□□□ -1.18
VTI1A-202ENST00000432306 WNT3P56703 355 aa7.66□□□□□ -1.18
VTI1A-202ENST00000432306 ARF5P84085 180 aa7.66□□□□□ -1.18
VTI1A-202ENST00000432306 RING1Q06587 406 aa7.66□□□□□ -1.18
VTI1A-202ENST00000432306 ZNF235Q14590 738 aa7.66□□□□□ -1.18
VTI1A-202ENST00000432306 LAPTM4AQ15012 233 aa7.66□□□□□ -1.18
VTI1A-202ENST00000432306 DUOXA1Q1HG43 343 aa7.66□□□□□ -1.18
VTI1A-202ENST00000432306 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.66□□□□□ -1.182e-7■□□□□ 9.3
VTI1A-202ENST00000432306 SOWAHCQ53LP3 525 aaPredicted RBP7.66□□□□□ -1.18
VTI1A-202ENST00000432306 PLAG1Q6DJT9 500 aa7.66□□□□□ -1.18
VTI1A-202ENST00000432306 FBXL22Q6P050 247 aa7.66□□□□□ -1.18
VTI1A-202ENST00000432306 DOK6Q6PKX4 331 aa7.66□□□□□ -1.18
VTI1A-202ENST00000432306 METAP1DQ6UB28 335 aaPredicted RBP7.66□□□□□ -1.18
VTI1A-202ENST00000432306 PTCHD4Q6ZW05 846 aa7.66□□□□□ -1.18
VTI1A-202ENST00000432306 PXKQ7Z7A4 578 aa7.66□□□□□ -1.18
VTI1A-202ENST00000432306 TRIM69Q86WT6 500 aa7.66□□□□□ -1.18
VTI1A-202ENST00000432306 DCBLD1Q8N8Z6 715 aa7.66□□□□□ -1.18
VTI1A-202ENST00000432306 OR8K3Q8NH51 312 aa7.66□□□□□ -1.18
VTI1A-202ENST00000432306 SCAMP5Q8TAC9 235 aa7.66□□□□□ -1.18
VTI1A-202ENST00000432306 CSGALNACT1Q8TDX6 532 aa7.66□□□□□ -1.18
VTI1A-202ENST00000432306 EDAQ92838 391 aa7.66□□□□□ -1.18
VTI1A-202ENST00000432306 RNF31Q96EP0 1072 aa7.66□□□□□ -1.18
VTI1A-202ENST00000432306 OPALINQ96PE5 141 aa7.66□□□□□ -1.18
VTI1A-202ENST00000432306 SOSTQ9BQB4 213 aa7.66□□□□□ -1.18
VTI1A-202ENST00000432306 INPP5KQ9BT40 448 aa7.66□□□□□ -1.18
VTI1A-202ENST00000432306 DOHHQ9BU89 302 aa7.66□□□□□ -1.18
VTI1A-202ENST00000432306 BARHL1Q9BZE3 327 aa7.66□□□□□ -1.18
VTI1A-202ENST00000432306 CRISPLD1Q9H336 500 aa7.66□□□□□ -1.18
VTI1A-202ENST00000432306 SLC25A19Q9HC21 320 aa7.66□□□□□ -1.18
VTI1A-202ENST00000432306 HHATLQ9HCP6 504 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms