RNA–Protein interactions for RNA: ENST00000432057.2

VRK2-205, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best)

Gene VRK2, Length 1,870 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-205ENST00000432057 RPL6Q02878 288 aaKnown RBP18.42■□□□□ 0.54
VRK2-205ENST00000432057 RELAQ04206 551 aa18.42■□□□□ 0.54
VRK2-205ENST00000432057 FUT5Q11128 374 aa18.42■□□□□ 0.54
VRK2-205ENST00000432057 IL18R1Q13478 541 aa18.42■□□□□ 0.54
VRK2-205ENST00000432057 PUM1Q14671 1186 aaKnown RBP eCLIP18.42■□□□□ 0.54
VRK2-205ENST00000432057 GANABQ14697 944 aaKnown RBP18.42■□□□□ 0.54
VRK2-205ENST00000432057 RBM48Q5RL73 367 aaKnown RBP18.42■□□□□ 0.54
VRK2-205ENST00000432057 LAIR2Q6ISS4 152 aa18.42■□□□□ 0.54
VRK2-205ENST00000432057 ARMC6Q6NXE6 501 aa18.42■□□□□ 0.54
VRK2-205ENST00000432057 RBM12BQ8IXT5 1001 aaKnown RBP18.42■□□□□ 0.54
VRK2-205ENST00000432057 TTC29Q8NA56 475 aaPredicted RBP18.42■□□□□ 0.54
VRK2-205ENST00000432057 KAT2AQ92830 837 aa18.42■□□□□ 0.54
VRK2-205ENST00000432057 MOAP1Q96BY2 351 aa18.42■□□□□ 0.54
VRK2-205ENST00000432057 C16orf58Q96GQ5 468 aa18.42■□□□□ 0.54
VRK2-205ENST00000432057 COL21A1Q96P44 957 aa18.42■□□□□ 0.54
VRK2-205ENST00000432057 PIP5K1AQ99755 562 aa18.42■□□□□ 0.54
VRK2-205ENST00000432057 TREX2Q9BQ50 279 aaPredicted RBP18.42■□□□□ 0.54
VRK2-205ENST00000432057 WNT16Q9UBV4 365 aa18.42■□□□□ 0.54
VRK2-205ENST00000432057 POMT2Q9UKY4 750 aa18.42■□□□□ 0.54
VRK2-205ENST00000432057 PSME2Q9UL46 239 aa18.42■□□□□ 0.54
VRK2-205ENST00000432057 DAPP1Q9UN19 280 aa18.42■□□□□ 0.54
VRK2-205ENST00000432057 ST6GAL1P15907 406 aa18.41■□□□□ 0.54
VRK2-205ENST00000432057 AGXTP21549 392 aa18.41■□□□□ 0.54
VRK2-205ENST00000432057 EPHA2P29317 976 aa18.41■□□□□ 0.54
VRK2-205ENST00000432057 SIM1P81133 766 aaPredicted RBP18.41■□□□□ 0.54
VRK2-205ENST00000432057 DEFB110Q30KQ9 67 aa18.41■□□□□ 0.54
VRK2-205ENST00000432057 C6orf141Q5SZD1 244 aa18.41■□□□□ 0.54
VRK2-205ENST00000432057 BHLHB9Q6PI77 547 aa18.41■□□□□ 0.54
VRK2-205ENST00000432057 ZNF605Q86T29 641 aa18.41■□□□□ 0.54
VRK2-205ENST00000432057 SHISA5Q8N114 240 aa18.41■□□□□ 0.54
VRK2-205ENST00000432057 LGI4Q8N135 537 aa18.41■□□□□ 0.54
VRK2-205ENST00000432057 NUP43Q8NFH3 380 aa18.41■□□□□ 0.54
VRK2-205ENST00000432057 OR10G2Q8NGC3 310 aa18.41■□□□□ 0.54
VRK2-205ENST00000432057 LMX1AQ8TE12 382 aa18.41■□□□□ 0.54
VRK2-205ENST00000432057 ELP4Q96EB1 424 aa18.41■□□□□ 0.54
VRK2-205ENST00000432057 SHDQ96IW2 340 aa18.41■□□□□ 0.54
VRK2-205ENST00000432057 ZNF607Q96SK3 696 aa18.41■□□□□ 0.54
VRK2-205ENST00000432057 CHRDQ9H2X0 955 aa18.41■□□□□ 0.54
VRK2-205ENST00000432057 EQTNQ9NQ60 294 aa18.41■□□□□ 0.54
VRK2-205ENST00000432057 H3BSA7 217 aa18.41■□□□□ 0.54
VRK2-205ENST00000432057 ZNF10P21506 573 aaPredicted RBP18.41■□□□□ 0.54
VRK2-205ENST00000432057 CRHBPP24387 322 aa18.41■□□□□ 0.54
VRK2-205ENST00000432057 EEF1B2P24534 225 aaKnown RBP18.41■□□□□ 0.54
VRK2-205ENST00000432057 PPP2R1BP30154 601 aa18.41■□□□□ 0.54
VRK2-205ENST00000432057 GSTT1P30711 240 aa18.41■□□□□ 0.54
VRK2-205ENST00000432057 PEX19P40855 299 aa18.41■□□□□ 0.54
VRK2-205ENST00000432057 VSX2P58304 361 aaPredicted RBP18.41■□□□□ 0.54
VRK2-205ENST00000432057 PRR5P85299 388 aa18.41■□□□□ 0.54
VRK2-205ENST00000432057 IL5RAQ01344 420 aa18.41■□□□□ 0.54
VRK2-205ENST00000432057 KCNC4Q03721 635 aa18.41■□□□□ 0.54
VRK2-205ENST00000432057 KEAP1Q14145 624 aa18.41■□□□□ 0.54
VRK2-205ENST00000432057 ELOCQ15369 112 aa18.41■□□□□ 0.54
VRK2-205ENST00000432057 BORAQ6PGQ7 559 aa18.41■□□□□ 0.54
VRK2-205ENST00000432057 OR4N5Q8IXE1 308 aa18.41■□□□□ 0.54
VRK2-205ENST00000432057 DEFB123Q8N688 67 aa18.41■□□□□ 0.54
VRK2-205ENST00000432057 SLC5A8Q8N695 610 aa18.41■□□□□ 0.54
VRK2-205ENST00000432057 CSNK1A1LQ8N752 337 aa18.41■□□□□ 0.54
VRK2-205ENST00000432057 ADAMTS16Q8TE57 1224 aa18.41■□□□□ 0.54
VRK2-205ENST00000432057 NMD3Q96D46 503 aaKnown RBP18.41■□□□□ 0.54
VRK2-205ENST00000432057 NPLQ9BXD5 320 aaPredicted RBP18.41■□□□□ 0.54
VRK2-205ENST00000432057 STARD5Q9NSY2 213 aa18.41■□□□□ 0.54
VRK2-205ENST00000432057 RHCGQ9UBD6 479 aa18.41■□□□□ 0.54
VRK2-205ENST00000432057 SEC14L3Q9UDX4 400 aa18.41■□□□□ 0.54
VRK2-205ENST00000432057 GMPPBQ9Y5P6 360 aa18.41■□□□□ 0.54
VRK2-205ENST00000432057 GPC6Q9Y625 555 aaPredicted RBP18.41■□□□□ 0.54
VRK2-205ENST00000432057 CEPT1Q9Y6K0 416 aa18.41■□□□□ 0.54
VRK2-205ENST00000432057 TLR4O00206 839 aa18.4■□□□□ 0.54
VRK2-205ENST00000432057 CHRM4P08173 479 aa18.4■□□□□ 0.54
VRK2-205ENST00000432057 RYKP34925 604 aa18.4■□□□□ 0.54
VRK2-205ENST00000432057 RACK1P63244 317 aaKnown RBP18.4■□□□□ 0.54
VRK2-205ENST00000432057 PUS10Q3MIT2 529 aaKnown RBP18.4■□□□□ 0.54
VRK2-205ENST00000432057 CHCHD2P9Q5T1J5 151 aaPredicted RBP18.4■□□□□ 0.54
VRK2-205ENST00000432057 ZNF773Q6PK81 442 aa18.4■□□□□ 0.54
VRK2-205ENST00000432057 LRRC25Q8N386 305 aaPredicted RBP18.4■□□□□ 0.54
VRK2-205ENST00000432057 ZNF655Q8N720 491 aaPredicted RBP18.4■□□□□ 0.54
VRK2-205ENST00000432057 CADM4Q8NFZ8 388 aa18.4■□□□□ 0.54
VRK2-205ENST00000432057 CNIH3Q8TBE1 160 aa18.4■□□□□ 0.54
VRK2-205ENST00000432057 SGCDQ92629 289 aa18.4■□□□□ 0.54
VRK2-205ENST00000432057 PROX1Q92786 737 aa18.4■□□□□ 0.54
VRK2-205ENST00000432057 HSPA12BQ96MM6 686 aa18.4■□□□□ 0.54
VRK2-205ENST00000432057 FEVQ99581 238 aa18.4■□□□□ 0.54
VRK2-205ENST00000432057 SEMA6CQ9H3T2 930 aa18.4■□□□□ 0.54
VRK2-205ENST00000432057 TBC1D17Q9HA65 648 aa18.4■□□□□ 0.54
VRK2-205ENST00000432057 C3orf14Q9HBI5 128 aa18.4■□□□□ 0.54
VRK2-205ENST00000432057 FAM60AQ9NP50 221 aa18.4■□□□□ 0.54
VRK2-205ENST00000432057 ACER3Q9NUN7 267 aa18.4■□□□□ 0.54
VRK2-205ENST00000432057 RLIMQ9NVW2 624 aa18.4■□□□□ 0.54
VRK2-205ENST00000432057 FAM32AQ9Y421 112 aaKnown RBP18.4■□□□□ 0.54
VRK2-205ENST00000432057 SLC22A7Q9Y694 548 aa18.4■□□□□ 0.54
VRK2-205ENST00000432057 KCNE3Q9Y6H6 103 aa18.4■□□□□ 0.54
VRK2-205ENST00000432057 ZSCAN9O15535 394 aaPredicted RBP18.39■□□□□ 0.54
VRK2-205ENST00000432057 NME6O75414 186 aaPredicted RBP18.39■□□□□ 0.54
VRK2-205ENST00000432057 RHCEP18577 417 aa18.39■□□□□ 0.54
VRK2-205ENST00000432057 MAGEA8P43361 318 aa18.39■□□□□ 0.54
VRK2-205ENST00000432057 LIMS1P48059 325 aa18.39■□□□□ 0.54
VRK2-205ENST00000432057 KCNJ5P48544 419 aa18.39■□□□□ 0.54
VRK2-205ENST00000432057 ANXA11P50995 505 aaKnown RBP18.39■□□□□ 0.54
VRK2-205ENST00000432057 FOXD4Q12950 439 aaPredicted RBP18.39■□□□□ 0.54
VRK2-205ENST00000432057 MICAQ29983 383 aa18.39■□□□□ 0.54
VRK2-205ENST00000432057 HMGN2P46Q86SG4 172 aa18.39■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms