RNA–Protein interactions for RNA: ENST00000430071.6

UBE3D-204, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5

Gene UBE3D, Length 1,352 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-204ENST00000430071 ARFGAP2Q8N6H7 521 aa15.75■□□□□ 0.11
UBE3D-204ENST00000430071 DOK4Q8TEW6 326 aa15.75■□□□□ 0.11
UBE3D-204ENST00000430071 PTPMT1Q8WUK0 201 aaPredicted RBP15.75■□□□□ 0.11
UBE3D-204ENST00000430071 ANKRD9Q96BM1 317 aaPredicted RBP15.75■□□□□ 0.11
UBE3D-204ENST00000430071 ALOXE3Q9BYJ1 711 aa15.75■□□□□ 0.11
UBE3D-204ENST00000430071 SLCO1B3Q9NPD5 702 aa15.75■□□□□ 0.11
UBE3D-204ENST00000430071 ADAM29Q9UKF5 820 aa15.75■□□□□ 0.11
UBE3D-204ENST00000430071 ATG4BQ9Y4P1 393 aa15.75■□□□□ 0.11
UBE3D-204ENST00000430071 ASB4Q9Y574 426 aa15.75■□□□□ 0.11
UBE3D-204ENST00000430071 PCDHGB6Q9Y5F9 930 aa15.75■□□□□ 0.11
UBE3D-204ENST00000430071 ABCA12Q86UK0 2595 aa15.74■□□□□ 0.11
UBE3D-204ENST00000430071 PHF3Q92576 2039 aaKnown RBP15.74■□□□□ 0.11
UBE3D-204ENST00000430071 LRBAP50851 2863 aa15.74■□□□□ 0.11
UBE3D-204ENST00000430071 ASPDHA6ND91 283 aa15.74■□□□□ 0.11
UBE3D-204ENST00000430071 NPIPB8E9PQR5 432 aa15.74■□□□□ 0.11
UBE3D-204ENST00000430071 CLDN4O14493 209 aa15.74■□□□□ 0.11
UBE3D-204ENST00000430071 RGS14O43566 566 aa15.74■□□□□ 0.11
UBE3D-204ENST00000430071 CTNSO60931 367 aa15.74■□□□□ 0.11
UBE3D-204ENST00000430071 SLC25A12O75746 678 aa15.74■□□□□ 0.11
UBE3D-204ENST00000430071 RSL1D1O76021 490 aaKnown RBP15.74■□□□□ 0.11
UBE3D-204ENST00000430071 FAM58BPP0C7Q3 252 aa15.74■□□□□ 0.11
UBE3D-204ENST00000430071 CD46P15529 392 aa15.74■□□□□ 0.11
UBE3D-204ENST00000430071 PRPH2P23942 346 aa15.74■□□□□ 0.11
UBE3D-204ENST00000430071 RFC3P40938 356 aa15.74■□□□□ 0.11
UBE3D-204ENST00000430071 NR0B1P51843 470 aaKnown RBP15.74■□□□□ 0.11
UBE3D-204ENST00000430071 HSF1Q00613 529 aa15.74■□□□□ 0.11
UBE3D-204ENST00000430071 ACSM2AQ08AH3 577 aa15.74■□□□□ 0.11
UBE3D-204ENST00000430071 SPIN4Q56A73 249 aa15.74■□□□□ 0.11
UBE3D-204ENST00000430071 ACSM2BQ68CK6 577 aa15.74■□□□□ 0.11
UBE3D-204ENST00000430071 CYP20A1Q6UW02 462 aa15.74■□□□□ 0.11
UBE3D-204ENST00000430071 DGAT2L6Q6ZPD8 337 aa15.74■□□□□ 0.11
UBE3D-204ENST00000430071 PAGE2Q7Z2X7 111 aa15.74■□□□□ 0.11
UBE3D-204ENST00000430071 GPR180Q86V85 440 aa15.74■□□□□ 0.11
UBE3D-204ENST00000430071 SIAH3Q8IW03 269 aa15.74■□□□□ 0.11
UBE3D-204ENST00000430071 ARMC10Q8N2F6 343 aa15.74■□□□□ 0.11
UBE3D-204ENST00000430071 UCN3Q969E3 161 aa15.74■□□□□ 0.11
UBE3D-204ENST00000430071 MAGEB18Q96M61 343 aa15.74■□□□□ 0.11
UBE3D-204ENST00000430071 TRIM45Q9H8W5 580 aaPredicted RBP15.74■□□□□ 0.11
UBE3D-204ENST00000430071 MARCOQ9UEW3 520 aaPredicted RBP15.74■□□□□ 0.11
UBE3D-204ENST00000430071 GIMAP2Q9UG22 337 aa15.74■□□□□ 0.11
UBE3D-204ENST00000430071 PPIEQ9UNP9 301 aaKnown RBP15.74■□□□□ 0.11
UBE3D-204ENST00000430071 CREBBPQ92793 2442 aa15.73■□□□□ 0.11
UBE3D-204ENST00000430071 ATP6AP2A0A1C7CYW4 349 aa15.73■□□□□ 0.11
UBE3D-204ENST00000430071 A0A1W2PR48 441 aa15.73■□□□□ 0.11
UBE3D-204ENST00000430071 NPIPA5E9PKD4 350 aa15.73■□□□□ 0.11
UBE3D-204ENST00000430071 LSM1O15116 133 aaKnown RBP15.73■□□□□ 0.11
UBE3D-204ENST00000430071 NME2P1O60361 137 aa15.73■□□□□ 0.11
UBE3D-204ENST00000430071 ZNF354AO60765 605 aaPredicted RBP15.73■□□□□ 0.11
UBE3D-204ENST00000430071 ATP6AP2O75787 350 aa15.73■□□□□ 0.11
UBE3D-204ENST00000430071 IFNA16P05015 189 aa15.73■□□□□ 0.11
UBE3D-204ENST00000430071 NME2P22392 152 aa15.73■□□□□ 0.11
UBE3D-204ENST00000430071 DCTP40126 519 aa15.73■□□□□ 0.11
UBE3D-204ENST00000430071 CLCN2P51788 898 aa15.73■□□□□ 0.11
UBE3D-204ENST00000430071 KIAA0040Q15053 153 aa15.73■□□□□ 0.11
UBE3D-204ENST00000430071 CCNYL2Q5T2Q4 361 aa15.73■□□□□ 0.11
UBE3D-204ENST00000430071 C18orf63Q68DL7 685 aa15.73■□□□□ 0.11
UBE3D-204ENST00000430071 GALNT18Q6P9A2 607 aa15.73■□□□□ 0.11
UBE3D-204ENST00000430071 MDGA2Q7Z553 956 aa15.73■□□□□ 0.11
UBE3D-204ENST00000430071 HOMEZQ8IX15 550 aa15.73■□□□□ 0.11
UBE3D-204ENST00000430071 RELTQ969Z4 430 aa15.73■□□□□ 0.11
UBE3D-204ENST00000430071 VMP1Q96GC9 406 aa15.73■□□□□ 0.11
UBE3D-204ENST00000430071 PPP1R36Q96LQ0 422 aa15.73■□□□□ 0.11
UBE3D-204ENST00000430071 C7orf26Q96N11 449 aa15.73■□□□□ 0.11
UBE3D-204ENST00000430071 ADAP2Q9NPF8 381 aa15.73■□□□□ 0.11
UBE3D-204ENST00000430071 LYARQ9NX58 379 aaKnown RBP15.73■□□□□ 0.11
UBE3D-204ENST00000430071 SIRT5Q9NXA8 310 aa15.73■□□□□ 0.11
UBE3D-204ENST00000430071 TEX10Q9NXF1 929 aaPredicted RBP15.73■□□□□ 0.11
UBE3D-204ENST00000430071 PHF11Q9UIL8 331 aa15.73■□□□□ 0.11
UBE3D-204ENST00000430071 NPIPA1Q9UND3 350 aa15.73■□□□□ 0.11
UBE3D-204ENST00000430071 TRGV8A0A0C4DH27 118 aa15.72■□□□□ 0.11
UBE3D-204ENST00000430071 PROM1O43490 865 aa15.72■□□□□ 0.11
UBE3D-204ENST00000430071 PCDH7O60245 1069 aa15.72■□□□□ 0.11
UBE3D-204ENST00000430071 FGF17O60258 216 aa15.72■□□□□ 0.11
UBE3D-204ENST00000430071 SEC22BO75396 215 aa15.72■□□□□ 0.11
UBE3D-204ENST00000430071 ITGA10O75578 1167 aa15.72■□□□□ 0.11
UBE3D-204ENST00000430071 KITP10721 976 aa15.72■□□□□ 0.11
UBE3D-204ENST00000430071 CPN2P22792 545 aa15.72■□□□□ 0.11
UBE3D-204ENST00000430071 TIA1P31483 386 aaKnown RBP eCLIP15.72■□□□□ 0.11
UBE3D-204ENST00000430071 TRHRP34981 398 aaPredicted RBP15.72■□□□□ 0.11
UBE3D-204ENST00000430071 CYB561P49447 251 aa15.72■□□□□ 0.11
UBE3D-204ENST00000430071 HLCSP50747 726 aa15.72■□□□□ 0.11
UBE3D-204ENST00000430071 MAPK12P53778 367 aa15.72■□□□□ 0.11
UBE3D-204ENST00000430071 TNFRSF17Q02223 184 aa15.72■□□□□ 0.11
UBE3D-204ENST00000430071 ALDH6A1Q02252 535 aaKnown RBP15.72■□□□□ 0.11
UBE3D-204ENST00000430071 TERF2Q15554 542 aa15.72■□□□□ 0.11
UBE3D-204ENST00000430071 C3AR1Q16581 482 aa15.72■□□□□ 0.11
UBE3D-204ENST00000430071 RFTN2Q52LD8 501 aaPredicted RBP15.72■□□□□ 0.11
UBE3D-204ENST00000430071 RGS9BPQ6ZS82 235 aa15.72■□□□□ 0.11
UBE3D-204ENST00000430071 NCCRP1Q6ZVX7 275 aaPredicted RBP15.72■□□□□ 0.11
UBE3D-204ENST00000430071 CHERPQ8IWX8 916 aaKnown RBP15.72■□□□□ 0.11
UBE3D-204ENST00000430071 KIRREL3Q8IZU9 778 aa15.72■□□□□ 0.11
UBE3D-204ENST00000430071 TMEM178AQ8NBL3 297 aa15.72■□□□□ 0.11
UBE3D-204ENST00000430071 ADAMTS18Q8TE60 1221 aa15.72■□□□□ 0.11
UBE3D-204ENST00000430071 CCT7Q99832 543 aa15.72■□□□□ 0.11
UBE3D-204ENST00000430071 EBPLQ9BY08 206 aa15.72■□□□□ 0.11
UBE3D-204ENST00000430071 NUF2Q9BZD4 464 aa15.72■□□□□ 0.11
UBE3D-204ENST00000430071 LRTM1Q9HBL6 345 aa15.72■□□□□ 0.11
UBE3D-204ENST00000430071 C1orf109Q9NX04 203 aa15.72■□□□□ 0.11
UBE3D-204ENST00000430071 VTI1BQ9UEU0 232 aa15.72■□□□□ 0.11
UBE3D-204ENST00000430071 MCM8Q9UJA3 840 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms