RNA–Protein interactions for RNA: ENST00000429738.1

MRPL28-203, Transcript of mitochondrial ribosomal protein L28, human

TSL 2 BASIC

Gene MRPL28, Length 310 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL28-203	ENST00000429738	SPACA9	Q96E40	222 aa	Predicted RBP	16.35	■□□□□ 0.21
MRPL28-203	ENST00000429738	CNPPD1	Q9BV87	410 aa		16.35	■□□□□ 0.21
MRPL28-203	ENST00000429738	MRPL1	Q9BYD6	325 aa	Known RBP	16.35	■□□□□ 0.21
MRPL28-203	ENST00000429738	WWTR1	Q9GZV5	400 aa		16.35	■□□□□ 0.21
MRPL28-203	ENST00000429738	TNFRSF10D	Q9UBN6	386 aa		16.35	■□□□□ 0.21
MRPL28-203	ENST00000429738	ZNF225	Q9UK10	706 aa		16.35	■□□□□ 0.21
MRPL28-203	ENST00000429738	NFU1	Q9UMS0	254 aa		16.35	■□□□□ 0.21
MRPL28-203	ENST00000429738	PRRC2A	P48634	2157 aa	Known RBP	16.35	■□□□□ 0.21
MRPL28-203	ENST00000429738	AKAP6	Q13023	2319 aa		16.35	■□□□□ 0.21
MRPL28-203	ENST00000429738	NCKAP5	O14513	1909 aa		16.35	■□□□□ 0.21
MRPL28-203	ENST00000429738	ANKHD1	Q8IWZ3	2542 aa	Known RBP	16.35	■□□□□ 0.21
MRPL28-203	ENST00000429738	HCFC1	P51610	2035 aa		16.35	■□□□□ 0.21
MRPL28-203	ENST00000429738	ABCA4	P78363	2273 aa		16.34	■□□□□ 0.21
MRPL28-203	ENST00000429738	IQANK1	A0A1B0GTG1	560 aa		16.34	■□□□□ 0.21
MRPL28-203	ENST00000429738		A0A1B0GVC2	190 aa		16.34	■□□□□ 0.21
MRPL28-203	ENST00000429738	EXOC1L	A0A1B0GW35	172 aa		16.34	■□□□□ 0.21
MRPL28-203	ENST00000429738	OR6C76	A6NM76	312 aa		16.34	■□□□□ 0.21
MRPL28-203	ENST00000429738	FOXO6	A8MYZ6	492 aa		16.34	■□□□□ 0.21
MRPL28-203	ENST00000429738	OR10H2	O60403	315 aa		16.34	■□□□□ 0.21
MRPL28-203	ENST00000429738		P04436	131 aa		16.34	■□□□□ 0.21
MRPL28-203	ENST00000429738	FBXO45	P0C2W1	286 aa		16.34	■□□□□ 0.21
MRPL28-203	ENST00000429738	DNASE1L1	P49184	302 aa		16.34	■□□□□ 0.21
MRPL28-203	ENST00000429738	ART1	P52961	327 aa		16.34	■□□□□ 0.21
MRPL28-203	ENST00000429738	SLC22A10	Q63ZE4	541 aa		16.34	■□□□□ 0.21
MRPL28-203	ENST00000429738	TTC19	Q6DKK2	380 aa	Predicted RBP	16.34	■□□□□ 0.21
MRPL28-203	ENST00000429738	RNF111	Q6ZNA4	994 aa		16.34	■□□□□ 0.21
MRPL28-203	ENST00000429738	FAM47E	Q6ZV65	393 aa		16.34	■□□□□ 0.21
MRPL28-203	ENST00000429738	DND1	Q8IYX4	353 aa	Known RBP	16.34	■□□□□ 0.21
MRPL28-203	ENST00000429738	ZNF441	Q8N8Z8	693 aa		16.34	■□□□□ 0.21
MRPL28-203	ENST00000429738	ASB5	Q8WWX0	329 aa		16.34	■□□□□ 0.21
MRPL28-203	ENST00000429738	TP63	Q9H3D4	680 aa	Predicted RBP	16.34	■□□□□ 0.21
MRPL28-203	ENST00000429738	PROK2	Q9HC23	129 aa		16.34	■□□□□ 0.21
MRPL28-203	ENST00000429738	FARSB	Q9NSD9	589 aa	Known RBP	16.34	■□□□□ 0.21
MRPL28-203	ENST00000429738	TUBA8	Q9NY65	449 aa	Predicted RBP	16.34	■□□□□ 0.21
MRPL28-203	ENST00000429738	AHSP	Q9NZD4	102 aa		16.34	■□□□□ 0.21
MRPL28-203	ENST00000429738	LIPG	Q9Y5X9	500 aa		16.34	■□□□□ 0.21
MRPL28-203	ENST00000429738	EXPH5	Q8NEV8	1989 aa		16.34	■□□□□ 0.21
MRPL28-203	ENST00000429738	ACAN	P16112	2415 aa		16.34	■□□□□ 0.21
MRPL28-203	ENST00000429738	RIPK2	O43353	540 aa		16.33	■□□□□ 0.2
MRPL28-203	ENST00000429738	OTC	P00480	354 aa		16.33	■□□□□ 0.2
MRPL28-203	ENST00000429738	KLK1	P06870	262 aa		16.33	■□□□□ 0.2
MRPL28-203	ENST00000429738	MAGEA5	P43359	124 aa		16.33	■□□□□ 0.2
MRPL28-203	ENST00000429738	CDH13	P55290	713 aa		16.33	■□□□□ 0.2
MRPL28-203	ENST00000429738	FUT7	Q11130	342 aa		16.33	■□□□□ 0.2
MRPL28-203	ENST00000429738	TBL3	Q12788	808 aa	Known RBP	16.33	■□□□□ 0.2
MRPL28-203	ENST00000429738	LGSN	Q5TDP6	509 aa		16.33	■□□□□ 0.2
MRPL28-203	ENST00000429738	TMEM211	Q6ICI0	200 aa		16.33	■□□□□ 0.2
MRPL28-203	ENST00000429738	TRIL	Q7L0X0	811 aa		16.33	■□□□□ 0.2
MRPL28-203	ENST00000429738	TRMT10C	Q7L0Y3	403 aa	Known RBP	16.33	■□□□□ 0.2
MRPL28-203	ENST00000429738	SLC29A4	Q7RTT9	530 aa		16.33	■□□□□ 0.2
MRPL28-203	ENST00000429738	PAGE2	Q7Z2X7	111 aa		16.33	■□□□□ 0.2
MRPL28-203	ENST00000429738	CEP112	Q8N8E3	955 aa		16.33	■□□□□ 0.2
MRPL28-203	ENST00000429738	LILRB4	Q8NHJ6	448 aa		16.33	■□□□□ 0.2
MRPL28-203	ENST00000429738	KIF18A	Q8NI77	898 aa		16.33	■□□□□ 0.2
MRPL28-203	ENST00000429738	TRPC4AP	Q8TEL6	797 aa		16.33	■□□□□ 0.2
MRPL28-203	ENST00000429738	MTBP	Q96DY7	904 aa		16.33	■□□□□ 0.2
MRPL28-203	ENST00000429738	TXLNGY	Q9BZA5	131 aa		16.33	■□□□□ 0.2
MRPL28-203	ENST00000429738	ELOVL6	Q9H5J4	265 aa		16.33	■□□□□ 0.2
MRPL28-203	ENST00000429738	CXorf21	Q9HAI6	301 aa		16.33	■□□□□ 0.2
MRPL28-203	ENST00000429738	BRF2	Q9HAW0	419 aa		16.33	■□□□□ 0.2
MRPL28-203	ENST00000429738	TMEM216	Q9P0N5	145 aa		16.33	■□□□□ 0.2
MRPL28-203	ENST00000429738	TRPS1	Q9UHF7	1281 aa		16.33	■□□□□ 0.2
MRPL28-203	ENST00000429738	CHCHD2	Q9Y6H1	151 aa	Predicted RBP	16.33	■□□□□ 0.2
MRPL28-203	ENST00000429738	FREM3	P0C091	2139 aa		16.33	■□□□□ 0.2
MRPL28-203	ENST00000429738	OR14I1	A6ND48	311 aa		16.32	■□□□□ 0.2
MRPL28-203	ENST00000429738	PDYN	P01213	254 aa		16.32	■□□□□ 0.2
MRPL28-203	ENST00000429738	CT62	P0C5K7	136 aa		16.32	■□□□□ 0.2
MRPL28-203	ENST00000429738	PIK3R1	P27986	724 aa		16.32	■□□□□ 0.2
MRPL28-203	ENST00000429738	SSTR4	P31391	388 aa		16.32	■□□□□ 0.2
MRPL28-203	ENST00000429738	HSD17B3	P37058	310 aa		16.32	■□□□□ 0.2
MRPL28-203	ENST00000429738	PIGA	P37287	484 aa		16.32	■□□□□ 0.2
MRPL28-203	ENST00000429738	GALNT1	Q10472	559 aa	Predicted RBP	16.32	■□□□□ 0.2
MRPL28-203	ENST00000429738	NTRK2	Q16620	822 aa		16.32	■□□□□ 0.2
MRPL28-203	ENST00000429738	GXYLT1	Q4G148	440 aa		16.32	■□□□□ 0.2
MRPL28-203	ENST00000429738	FAM219B	Q5XKK7	198 aa		16.32	■□□□□ 0.2
MRPL28-203	ENST00000429738	COMMD6	Q7Z4G1	85 aa		16.32	■□□□□ 0.2
MRPL28-203	ENST00000429738	LCA5	Q86VQ0	697 aa		16.32	■□□□□ 0.2
MRPL28-203	ENST00000429738	GALNT12	Q8IXK2	581 aa		16.32	■□□□□ 0.2
MRPL28-203	ENST00000429738	IFT20	Q8IY31	132 aa		16.32	■□□□□ 0.2
MRPL28-203	ENST00000429738	FBXW8	Q8N3Y1	598 aa		16.32	■□□□□ 0.2
MRPL28-203	ENST00000429738	RPRML	Q8N4K4	120 aa		16.32	■□□□□ 0.2
MRPL28-203	ENST00000429738	OR4K14	Q8NGD5	310 aa		16.32	■□□□□ 0.2
MRPL28-203	ENST00000429738	TP53INP1	Q96A56	240 aa		16.32	■□□□□ 0.2
MRPL28-203	ENST00000429738	GAL3ST4	Q96RP7	486 aa		16.32	■□□□□ 0.2
MRPL28-203	ENST00000429738	FETUB	Q9UGM5	382 aa		16.32	■□□□□ 0.2
MRPL28-203	ENST00000429738	CES1P1	Q9UKY3	287 aa		16.32	■□□□□ 0.2
MRPL28-203	ENST00000429738	NPIPA2	E9PIF3	369 aa		16.31	■□□□□ 0.2
MRPL28-203	ENST00000429738	NPIPA3	F8WFD2	350 aa		16.31	■□□□□ 0.2
MRPL28-203	ENST00000429738	AQP7	O14520	342 aa		16.31	■□□□□ 0.2
MRPL28-203	ENST00000429738	SUSD5	O60279	629 aa		16.31	■□□□□ 0.2
MRPL28-203	ENST00000429738	TSPAN8	P19075	237 aa		16.31	■□□□□ 0.2
MRPL28-203	ENST00000429738	CLC	Q05315	142 aa		16.31	■□□□□ 0.2
MRPL28-203	ENST00000429738	UNC50	Q53HI1	259 aa		16.31	■□□□□ 0.2
MRPL28-203	ENST00000429738	ZNF678	Q5SXM1	525 aa		16.31	■□□□□ 0.2
MRPL28-203	ENST00000429738	CCNYL2	Q5T2Q4	361 aa		16.31	■□□□□ 0.2
MRPL28-203	ENST00000429738	SLC48A1	Q6P1K1	146 aa		16.31	■□□□□ 0.2
MRPL28-203	ENST00000429738	DMRTC2	Q8IXT2	367 aa	Predicted RBP	16.31	■□□□□ 0.2
MRPL28-203	ENST00000429738	ZNF615	Q8N8J6	731 aa		16.31	■□□□□ 0.2
MRPL28-203	ENST00000429738	OR10G3	Q8NGC4	313 aa		16.31	■□□□□ 0.2
MRPL28-203	ENST00000429738	SELENOM	Q8WWX9	145 aa		16.31	■□□□□ 0.2

Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms