RNA–Protein interactions for RNA: ENST00000429416.7

SMARCA4-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2 BASIC

Gene SMARCA4, Length 5,691 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-203ENST00000429416 ZUFSPQ96AP4 578 aa16.24■□□□□ 0.19
SMARCA4-203ENST00000429416 CCDC74AQ96AQ1 378 aa16.24■□□□□ 0.19
SMARCA4-203ENST00000429416 TBC1D20Q96BZ9 403 aa16.24■□□□□ 0.19
SMARCA4-203ENST00000429416 CD93Q9NPY3 652 aa16.24■□□□□ 0.19
SMARCA4-203ENST00000429416 WNT16Q9UBV4 365 aa16.24■□□□□ 0.19
SMARCA4-203ENST00000429416 TMEM5Q9Y2B1 443 aa16.24■□□□□ 0.19
SMARCA4-203ENST00000429416 SMCHD1A6NHR9 2005 aa16.24■□□□□ 0.19
SMARCA4-203ENST00000429416 EME2A4GXA9 379 aaPredicted RBP16.24■□□□□ 0.19
SMARCA4-203ENST00000429416 H3BML4 177 aa16.24■□□□□ 0.19
SMARCA4-203ENST00000429416 EI24O14681 340 aa16.24■□□□□ 0.19
SMARCA4-203ENST00000429416 SOX30O94993 753 aa16.24■□□□□ 0.19
SMARCA4-203ENST00000429416 FUT4P22083 530 aa16.24■□□□□ 0.19
SMARCA4-203ENST00000429416 TMEM44Q2T9K0 475 aa16.24■□□□□ 0.19
SMARCA4-203ENST00000429416 GALNTL5Q7Z4T8 443 aa16.24■□□□□ 0.19
SMARCA4-203ENST00000429416 SLC37A2Q8TED4 501 aa16.24■□□□□ 0.19
SMARCA4-203ENST00000429416 POFUT2Q9Y2G5 429 aa16.24■□□□□ 0.19
SMARCA4-203ENST00000429416 A0A096LPI6 279 aa16.24■□□□□ 0.19
SMARCA4-203ENST00000429416 F10P00742 488 aa16.24■□□□□ 0.19
SMARCA4-203ENST00000429416 FADDQ13158 208 aa16.24■□□□□ 0.19
SMARCA4-203ENST00000429416 MADCAM1Q13477 382 aa16.24■□□□□ 0.19
SMARCA4-203ENST00000429416 IL20RBQ6UXL0 311 aa16.24■□□□□ 0.19
SMARCA4-203ENST00000429416 ASB11Q8WXH4 323 aa16.24■□□□□ 0.19
SMARCA4-203ENST00000429416 TANKQ92844 425 aa16.24■□□□□ 0.19
SMARCA4-203ENST00000429416 K7ESM1 405 aa16.24■□□□□ 0.19
SMARCA4-203ENST00000429416 VASPP50552 380 aaPredicted RBP16.24■□□□□ 0.19
SMARCA4-203ENST00000429416 GBX2P52951 348 aaPredicted RBP16.24■□□□□ 0.19
SMARCA4-203ENST00000429416 RRADP55042 308 aa16.24■□□□□ 0.19
SMARCA4-203ENST00000429416 TRAP1Q12931 704 aaKnown RBP16.24■□□□□ 0.19
SMARCA4-203ENST00000429416 NPTX1Q15818 432 aa16.24■□□□□ 0.19
SMARCA4-203ENST00000429416 ARSJQ5FYB0 599 aaPredicted RBP16.24■□□□□ 0.19
SMARCA4-203ENST00000429416 CTSL3PQ5NE16 218 aa16.24■□□□□ 0.19
SMARCA4-203ENST00000429416 NANOGP8Q6NSW7 305 aa16.24■□□□□ 0.19
SMARCA4-203ENST00000429416 RBM44Q6ZP01 1051 aaKnown RBP16.24■□□□□ 0.19
SMARCA4-203ENST00000429416 LINC00471Q8N535 108 aa16.24■□□□□ 0.19
SMARCA4-203ENST00000429416 ASB9Q96DX5 294 aa16.24■□□□□ 0.19
SMARCA4-203ENST00000429416 NANOGQ9H9S0 305 aa16.24■□□□□ 0.19
SMARCA4-203ENST00000429416 KCND3Q9UK17 655 aa16.24■□□□□ 0.19
SMARCA4-203ENST00000429416 BCORQ6W2J9 1755 aa16.24■□□□□ 0.19
SMARCA4-203ENST00000429416 PRODHO43272 600 aa16.23■□□□□ 0.19
SMARCA4-203ENST00000429416 DLX2Q07687 328 aaPredicted RBP16.23■□□□□ 0.19
SMARCA4-203ENST00000429416 C6orf132Q5T0Z8 1188 aa16.23■□□□□ 0.19
SMARCA4-203ENST00000429416 UBE2NP61088 152 aaKnown RBP16.23■□□□□ 0.19
SMARCA4-203ENST00000429416 OR2L8Q8NGY9 312 aa16.23■□□□□ 0.19
SMARCA4-203ENST00000429416 INTS6Q9UL03 887 aaKnown RBP16.23■□□□□ 0.19
SMARCA4-203ENST00000429416 A0A1B0GW55 424 aa16.23■□□□□ 0.19
SMARCA4-203ENST00000429416 DUX4L2P0CJ85 424 aa16.23■□□□□ 0.19
SMARCA4-203ENST00000429416 DUX4L3P0CJ86 424 aa16.23■□□□□ 0.19
SMARCA4-203ENST00000429416 DUX4L4P0CJ87 422 aa16.23■□□□□ 0.19
SMARCA4-203ENST00000429416 DUX4L5P0CJ88 424 aa16.23■□□□□ 0.19
SMARCA4-203ENST00000429416 DUX4L6P0CJ89 424 aa16.23■□□□□ 0.19
SMARCA4-203ENST00000429416 DUX4L7P0CJ90 424 aa16.23■□□□□ 0.19
SMARCA4-203ENST00000429416 CD46P15529 392 aa16.23■□□□□ 0.19
SMARCA4-203ENST00000429416 CLDN8P56748 225 aa16.23■□□□□ 0.19
SMARCA4-203ENST00000429416 KCNC4Q03721 635 aa16.23■□□□□ 0.19
SMARCA4-203ENST00000429416 CRYZQ08257 329 aaKnown RBP16.23■□□□□ 0.19
SMARCA4-203ENST00000429416 TPRG1LQ5T0D9 272 aa16.23■□□□□ 0.19
SMARCA4-203ENST00000429416 GPR137CQ8N3F9 429 aa16.23■□□□□ 0.19
SMARCA4-203ENST00000429416 DUX4Q9UBX2 424 aa16.23■□□□□ 0.19
SMARCA4-203ENST00000429416 PPP2CBP62714 309 aa16.23■□□□□ 0.19
SMARCA4-203ENST00000429416 PPP2CAP67775 309 aa16.23■□□□□ 0.19
SMARCA4-203ENST00000429416 ZXDBP98169 803 aa16.23■□□□□ 0.19
SMARCA4-203ENST00000429416 ATG9BQ674R7 924 aa16.23■□□□□ 0.19
SMARCA4-203ENST00000429416 KLHL17Q6TDP4 642 aa16.23■□□□□ 0.19
SMARCA4-203ENST00000429416 PIGWQ7Z7B1 504 aa16.23■□□□□ 0.19
SMARCA4-203ENST00000429416 ALDH16A1Q8IZ83 802 aa16.23■□□□□ 0.19
SMARCA4-203ENST00000429416 TEX26Q8N6G2 289 aa16.23■□□□□ 0.19
SMARCA4-203ENST00000429416 OR51Q1Q8NH59 317 aa16.23■□□□□ 0.19
SMARCA4-203ENST00000429416 MPP4Q96JB8 637 aa16.23■□□□□ 0.19
SMARCA4-203ENST00000429416 AIG1Q9NVV5 245 aa16.23■□□□□ 0.19
SMARCA4-203ENST00000429416 RPL36Q9Y3U8 105 aaKnown RBP16.23■□□□□ 0.19
SMARCA4-203ENST00000429416 PEX2P28328 305 aa16.23■□□□□ 0.19
SMARCA4-203ENST00000429416 OR12D2P58182 307 aa16.23■□□□□ 0.19
SMARCA4-203ENST00000429416 UGT3A2Q3SY77 523 aa16.23■□□□□ 0.19
SMARCA4-203ENST00000429416 FAM86B1Q8N7N1 296 aa16.23■□□□□ 0.19
SMARCA4-203ENST00000429416 KHSRPQ92945 711 aaKnown RBP eCLIP16.23■□□□□ 0.19
SMARCA4-203ENST00000429416 COQ10BQ9H8M1 238 aa16.23■□□□□ 0.19
SMARCA4-203ENST00000429416 SPATA2Q9UM82 520 aa16.23■□□□□ 0.19
SMARCA4-203ENST00000429416 ECM29Q5VYK3 1845 aa16.23■□□□□ 0.19
SMARCA4-203ENST00000429416 ANHXE9PGG2 379 aa16.22■□□□□ 0.19
SMARCA4-203ENST00000429416 ZFAND5O76080 213 aa16.22■□□□□ 0.19
SMARCA4-203ENST00000429416 ZDHHC11BP0C7U3 371 aa16.22■□□□□ 0.19
SMARCA4-203ENST00000429416 CKMT2P17540 419 aa16.22■□□□□ 0.19
SMARCA4-203ENST00000429416 MXD1Q05195 221 aa16.22■□□□□ 0.19
SMARCA4-203ENST00000429416 KRT74Q7RTS7 529 aa16.22■□□□□ 0.19
SMARCA4-203ENST00000429416 TIMMDC1Q9NPL8 285 aa16.22■□□□□ 0.19
SMARCA4-203ENST00000429416 DOCK1Q14185 1865 aa16.22■□□□□ 0.19
SMARCA4-203ENST00000429416 MYO18AQ92614 2054 aaKnown RBP16.22■□□□□ 0.19
SMARCA4-203ENST00000429416 ETFAP13804 333 aa16.22■□□□□ 0.19
SMARCA4-203ENST00000429416 CES4AQ5XG92 561 aa16.22■□□□□ 0.19
SMARCA4-203ENST00000429416 HDDC2Q7Z4H3 204 aa16.22■□□□□ 0.19
SMARCA4-203ENST00000429416 TMBIM1Q969X1 311 aa16.22■□□□□ 0.19
SMARCA4-203ENST00000429416 ELF4Q99607 663 aaPredicted RBP16.22■□□□□ 0.19
SMARCA4-203ENST00000429416 ACTRT3Q9BYD9 372 aa16.22■□□□□ 0.19
SMARCA4-203ENST00000429416 TNFRSF10DQ9UBN6 386 aa16.22■□□□□ 0.19
SMARCA4-203ENST00000429416 WBP11Q9Y2W2 641 aaKnown RBP16.22■□□□□ 0.19
SMARCA4-203ENST00000429416 ADRA1AP35348 466 aa16.22■□□□□ 0.19
SMARCA4-203ENST00000429416 CLIP4Q8N3C7 705 aa16.22■□□□□ 0.19
SMARCA4-203ENST00000429416 ZNF283Q8N7M2 679 aa16.22■□□□□ 0.19
SMARCA4-203ENST00000429416 FANK1Q8TC84 345 aa16.22■□□□□ 0.19
SMARCA4-203ENST00000429416 RNF215Q9Y6U7 377 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms