RNA–Protein interactions for RNA: ENST00000428726.6

CD44-208, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CD44, Length 3,046 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-208ENST00000428726 LIPAP38571 399 aa7.92□□□□□ -1.14
CD44-208ENST00000428726 PIK3CBP42338 1070 aa7.92□□□□□ -1.14
CD44-208ENST00000428726 DSTNP60981 165 aa7.92□□□□□ -1.14
CD44-208ENST00000428726 CSNK1G2P78368 415 aa7.92□□□□□ -1.14
CD44-208ENST00000428726 GRSF1Q12849 480 aaKnown RBP eCLIP7.92□□□□□ -1.14
CD44-208ENST00000428726 E2F2Q14209 437 aa7.92□□□□□ -1.14
CD44-208ENST00000428726 MOGQ16653 247 aa7.92□□□□□ -1.14
CD44-208ENST00000428726 INAVAQ3KP66 663 aa7.92□□□□□ -1.14
CD44-208ENST00000428726 TOR1AIP1Q5JTV8 583 aa7.92□□□□□ -1.14
CD44-208ENST00000428726 SNAP47Q5SQN1 464 aa7.92□□□□□ -1.14
CD44-208ENST00000428726 C10orf62Q5T681 223 aaPredicted RBP7.92□□□□□ -1.14
CD44-208ENST00000428726 DEPDC1Q5TB30 811 aa7.92□□□□□ -1.14
CD44-208ENST00000428726 ANXA8L1Q5VT79 327 aa7.92□□□□□ -1.14
CD44-208ENST00000428726 PRAMEF17Q5VTA0 474 aa7.92□□□□□ -1.14
CD44-208ENST00000428726 SHQ1Q6PI26 577 aaKnown RBP7.92□□□□□ -1.14
CD44-208ENST00000428726 SMARCD3Q6STE5 483 aa7.92□□□□□ -1.14
CD44-208ENST00000428726 EIF3MQ7L2H7 374 aaKnown RBP7.92□□□□□ -1.14
CD44-208ENST00000428726 PDZD3Q86UT5 571 aa7.92□□□□□ -1.14
CD44-208ENST00000428726 DCUN1D3Q8IWE4 304 aa7.92□□□□□ -1.14
CD44-208ENST00000428726 LRRC56Q8IYG6 542 aaPredicted RBP7.92□□□□□ -1.14
CD44-208ENST00000428726 SYNPOQ8N3V7 929 aa7.92□□□□□ -1.14
CD44-208ENST00000428726 IL17RCQ8NAC3 791 aa7.92□□□□□ -1.14
CD44-208ENST00000428726 NLGN4YQ8NFZ3 816 aaPredicted RBP7.92□□□□□ -1.14
CD44-208ENST00000428726 OR2A1Q8NGT9 310 aa7.92□□□□□ -1.14
CD44-208ENST00000428726 SP7Q8TDD2 431 aaPredicted RBP7.92□□□□□ -1.14
CD44-208ENST00000428726 TBX5Q99593 518 aa7.92□□□□□ -1.14
CD44-208ENST00000428726 MAPKAP1Q9BPZ7 522 aa7.92□□□□□ -1.14
CD44-208ENST00000428726 KCNS3Q9BQ31 491 aa7.92□□□□□ -1.14
CD44-208ENST00000428726 SPATA9Q9BWV2 254 aa7.92□□□□□ -1.14
CD44-208ENST00000428726 TM9SF3Q9HD45 589 aa7.92□□□□□ -1.14
CD44-208ENST00000428726 C1GALT1Q9NS00 363 aa7.92□□□□□ -1.14
CD44-208ENST00000428726 FBXO34Q9NWN3 711 aa7.92□□□□□ -1.14
CD44-208ENST00000428726 TVP23BQ9NYZ1 205 aa7.92□□□□□ -1.14
CD44-208ENST00000428726 TMEM9Q9P0T7 183 aa7.92□□□□□ -1.14
CD44-208ENST00000428726 BTNL2Q9UIR0 455 aa7.92□□□□□ -1.14
CD44-208ENST00000428726 CDH7Q9ULB5 785 aa7.92□□□□□ -1.14
CD44-208ENST00000428726 CYP8B1Q9UNU6 501 aa7.92□□□□□ -1.14
CD44-208ENST00000428726 CORO2BQ9UQ03 480 aa7.92□□□□□ -1.14
CD44-208ENST00000428726 CLCA2Q9UQC9 943 aa7.92□□□□□ -1.14
CD44-208ENST00000428726 GPR55Q9Y2T6 319 aaPredicted RBP7.92□□□□□ -1.14
CD44-208ENST00000428726 PCDHGA10Q9Y5H3 936 aa7.92□□□□□ -1.14
CD44-208ENST00000428726 GMEB1Q9Y692 573 aa7.92□□□□□ -1.14
CD44-208ENST00000428726 CLCA3PQ9Y6N3 262 aa7.92□□□□□ -1.14
CD44-208ENST00000428726 SLC16A6O15403 523 aa7.92□□□□□ -1.14
CD44-208ENST00000428726 PDPK1O15530 556 aa7.92□□□□□ -1.14
CD44-208ENST00000428726 DLGAP3O95886 979 aa7.92□□□□□ -1.14
CD44-208ENST00000428726 ACADMP11310 421 aa7.92□□□□□ -1.14
CD44-208ENST00000428726 CD36P16671 472 aa7.92□□□□□ -1.14
CD44-208ENST00000428726 KELP23276 732 aa7.92□□□□□ -1.14
CD44-208ENST00000428726 SOX3P41225 446 aa7.92□□□□□ -1.14
CD44-208ENST00000428726 CLK1P49759 484 aaKnown RBP7.92□□□□□ -1.14
CD44-208ENST00000428726 CCR8P51685 355 aa7.92□□□□□ -1.14
CD44-208ENST00000428726 GABARAPL2P60520 117 aa7.92□□□□□ -1.14
CD44-208ENST00000428726 SELENOWP63302 87 aa7.92□□□□□ -1.14
CD44-208ENST00000428726 TUBA3CQ13748 450 aa7.92□□□□□ -1.14
CD44-208ENST00000428726 VEZF1Q14119 521 aa7.92□□□□□ -1.14
CD44-208ENST00000428726 BCL7AQ4VC05 210 aa7.92□□□□□ -1.14
CD44-208ENST00000428726 ZNF691Q5VV52 312 aa7.92□□□□□ -1.14
CD44-208ENST00000428726 METRNLQ641Q3 311 aa7.92□□□□□ -1.14
CD44-208ENST00000428726 FRMPD2BQ6IN97 320 aa7.92□□□□□ -1.14
CD44-208ENST00000428726 FAM71E1Q6IPT2 247 aa7.92□□□□□ -1.14
CD44-208ENST00000428726 DHRS4L2Q6PKH6 230 aa7.92□□□□□ -1.14
CD44-208ENST00000428726 SLC16A12Q6ZSM3 486 aa7.92□□□□□ -1.14
CD44-208ENST00000428726 CAMKMTQ7Z624 323 aa7.92□□□□□ -1.14
CD44-208ENST00000428726 TP53I13Q8NBR0 393 aaPredicted RBP7.92□□□□□ -1.14
CD44-208ENST00000428726 OR5K2Q8NHB8 316 aa7.92□□□□□ -1.14
CD44-208ENST00000428726 AIF1LQ9BQI0 150 aa7.92□□□□□ -1.14
CD44-208ENST00000428726 COPS4Q9BT78 406 aa7.92□□□□□ -1.14
CD44-208ENST00000428726 GLIPR2Q9H4G4 154 aa7.92□□□□□ -1.14
CD44-208ENST00000428726 IL21RQ9HBE5 538 aa7.92□□□□□ -1.14
CD44-208ENST00000428726 SEMA3GQ9NS98 782 aa7.92□□□□□ -1.14
CD44-208ENST00000428726 THAP10Q9P2Z0 257 aaPredicted RBP7.92□□□□□ -1.14
CD44-208ENST00000428726 ERGIC3Q9Y282 383 aa7.92□□□□□ -1.14
CD44-208ENST00000428726 SLC27A6Q9Y2P4 619 aa7.92□□□□□ -1.14
CD44-208ENST00000428726 KNTC1P50748 2209 aa7.91□□□□□ -1.14
CD44-208ENST00000428726 ZC3H12DA2A288 527 aaKnown RBP7.91□□□□□ -1.14
CD44-208ENST00000428726 OR6C74A6NCV1 312 aa7.91□□□□□ -1.14
CD44-208ENST00000428726 LRRC72A6NJI9 287 aa7.91□□□□□ -1.14
CD44-208ENST00000428726 GPR37L1O60883 481 aa7.91□□□□□ -1.14
CD44-208ENST00000428726 PTHP01270 115 aa7.91□□□□□ -1.14
CD44-208ENST00000428726 INHBBP09529 407 aa7.91□□□□□ -1.14
CD44-208ENST00000428726 GSTT2P0CG29 244 aa7.91□□□□□ -1.14
CD44-208ENST00000428726 GSTT2BP0CG30 244 aa7.91□□□□□ -1.14
CD44-208ENST00000428726 BMP4P12644 408 aa7.91□□□□□ -1.14
CD44-208ENST00000428726 AZGP1P25311 298 aaKnown RBP7.91□□□□□ -1.14
CD44-208ENST00000428726 BSGP35613 385 aa7.91□□□□□ -1.14
CD44-208ENST00000428726 CD97P48960 835 aa7.91□□□□□ -1.14
CD44-208ENST00000428726 UBE3AQ05086 875 aa7.91□□□□□ -1.14
CD44-208ENST00000428726 INSL4Q14641 139 aa7.91□□□□□ -1.14
CD44-208ENST00000428726 GPR68Q15743 365 aa7.91□□□□□ -1.14
CD44-208ENST00000428726 DUSP6Q16828 381 aa7.91□□□□□ -1.14
CD44-208ENST00000428726 ITPRIPL2Q3MIP1 535 aa7.91□□□□□ -1.14
CD44-208ENST00000428726 SLC35F1Q5T1Q4 408 aa7.91□□□□□ -1.14
CD44-208ENST00000428726 FAM46CQ5VWP2 391 aa7.91□□□□□ -1.14
CD44-208ENST00000428726 FIGNL1Q6PIW4 674 aa7.91□□□□□ -1.14
CD44-208ENST00000428726 FAM111BQ6SJ93 734 aa7.91□□□□□ -1.14
CD44-208ENST00000428726 PRR23CQ6ZRP0 262 aa7.91□□□□□ -1.14
CD44-208ENST00000428726 GPR155Q7Z3F1 870 aa7.91□□□□□ -1.14
CD44-208ENST00000428726 KRT78Q8N1N4 520 aa7.91□□□□□ -1.14
CD44-208ENST00000428726 STX19Q8N4C7 294 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms