RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 DYRK3O43781 588 aa15.16■□□□□ 0.02
VARS-216ENST00000428445 EPPINO95925 133 aa15.16■□□□□ 0.02
VARS-216ENST00000428445 MTHFD2P13995 350 aa15.16■□□□□ 0.02
VARS-216ENST00000428445 DNASE1P24855 282 aa15.16■□□□□ 0.02
VARS-216ENST00000428445 TACR1P25103 407 aa15.16■□□□□ 0.02
VARS-216ENST00000428445 CEACAM8P31997 349 aaPredicted RBP15.16■□□□□ 0.02
VARS-216ENST00000428445 SPRP35270 261 aaPredicted RBP15.16■□□□□ 0.02
VARS-216ENST00000428445 DGKQP52824 942 aa15.16■□□□□ 0.02
VARS-216ENST00000428445 GNG11P61952 73 aa15.16■□□□□ 0.02
VARS-216ENST00000428445 IRF9Q00978 393 aa15.16■□□□□ 0.02
VARS-216ENST00000428445 SLMAPQ14BN4 828 aa15.16■□□□□ 0.02
VARS-216ENST00000428445 FLYWCH1Q4VC44 716 aa15.16■□□□□ 0.02
VARS-216ENST00000428445 EIPR1Q53HC9 387 aa15.16■□□□□ 0.02
VARS-216ENST00000428445 DCST1Q5T197 706 aa15.16■□□□□ 0.02
VARS-216ENST00000428445 GRTP1Q5TC63 336 aa15.16■□□□□ 0.02
VARS-216ENST00000428445 FNDC7Q5VTL7 733 aa15.16■□□□□ 0.02
VARS-216ENST00000428445 MRM1Q6IN84 353 aaKnown RBP15.16■□□□□ 0.02
VARS-216ENST00000428445 PLXDC2Q6UX71 529 aa15.16■□□□□ 0.02
VARS-216ENST00000428445 Q71RC1 249 aaPredicted RBP15.16■□□□□ 0.02
VARS-216ENST00000428445 PPM1NQ8N819 430 aa15.16■□□□□ 0.02
VARS-216ENST00000428445 RNASE6Q93091 150 aaKnown RBP15.16■□□□□ 0.02
VARS-216ENST00000428445 ART5Q96L15 291 aa15.16■□□□□ 0.02
VARS-216ENST00000428445 SMR3AQ99954 134 aa15.16■□□□□ 0.02
VARS-216ENST00000428445 ERP44Q9BS26 406 aa15.16■□□□□ 0.02
VARS-216ENST00000428445 CAMK2AQ9UQM7 478 aa15.16■□□□□ 0.02
VARS-216ENST00000428445 ANKHD1Q8IWZ3 2542 aaKnown RBP15.15■□□□□ 0.02
VARS-216ENST00000428445 A0A0A6YYD5 115 aa15.15■□□□□ 0.02
VARS-216ENST00000428445 C2orf72A6NCS6 295 aa15.15■□□□□ 0.02
VARS-216ENST00000428445 AHRRA9YTQ3 701 aa15.15■□□□□ 0.02
VARS-216ENST00000428445 DVL2O14641 736 aa15.15■□□□□ 0.02
VARS-216ENST00000428445 AIFM1O95831 613 aa15.15■□□□□ 0.02
VARS-216ENST00000428445 FAM58BPP0C7Q3 252 aa15.15■□□□□ 0.02
VARS-216ENST00000428445 EPB42P16452 691 aa15.15■□□□□ 0.02
VARS-216ENST00000428445 TLX1P31314 330 aaPredicted RBP15.15■□□□□ 0.02
VARS-216ENST00000428445 BSGP35613 385 aa15.15■□□□□ 0.02
VARS-216ENST00000428445 SOX18P35713 384 aa15.15■□□□□ 0.02
VARS-216ENST00000428445 ASCL1P50553 236 aa15.15■□□□□ 0.02
VARS-216ENST00000428445 TOMM20Q15388 145 aa15.15■□□□□ 0.02
VARS-216ENST00000428445 CPSF6Q16630 551 aaKnown RBP eCLIP15.15■□□□□ 0.02
VARS-216ENST00000428445 SPRED3Q2MJR0 410 aa15.15■□□□□ 0.02
VARS-216ENST00000428445 KBTBD12Q3ZCT8 623 aa15.15■□□□□ 0.02
VARS-216ENST00000428445 FAM219BQ5XKK7 198 aa15.15■□□□□ 0.02
VARS-216ENST00000428445 TMEM198Q66K66 360 aa15.15■□□□□ 0.02
VARS-216ENST00000428445 CCDC91Q7Z6B0 441 aa15.15■□□□□ 0.02
VARS-216ENST00000428445 ZCCHC7Q8N3Z6 543 aaKnown RBP15.15■□□□□ 0.02
VARS-216ENST00000428445 ZNF441Q8N8Z8 693 aa15.15■□□□□ 0.02
VARS-216ENST00000428445 KCTD4Q8WVF5 259 aa15.15■□□□□ 0.02
VARS-216ENST00000428445 ZNF597Q96LX8 424 aa15.15■□□□□ 0.02
VARS-216ENST00000428445 DOCK7Q96N67 2140 aa15.15■□□□□ 0.02
VARS-216ENST00000428445 RILPQ96NA2 401 aa15.15■□□□□ 0.02
VARS-216ENST00000428445 TRIB1Q96RU8 372 aa15.15■□□□□ 0.02
VARS-216ENST00000428445 DLL4Q9NR61 685 aa15.15■□□□□ 0.02
VARS-216ENST00000428445 PHF11Q9UIL8 331 aa15.15■□□□□ 0.02
VARS-216ENST00000428445 EXPH5Q8NEV8 1989 aa15.15■□□□□ 0.02
VARS-216ENST00000428445 C2orf92A0A1B0GVN3 265 aa15.14■□□□□ 0.01
VARS-216ENST00000428445 FAM47E-STBD1D6RA91 191 aa15.14■□□□□ 0.01
VARS-216ENST00000428445 GNB5O14775 395 aa15.14■□□□□ 0.01
VARS-216ENST00000428445 KERAO60938 352 aa15.14■□□□□ 0.01
VARS-216ENST00000428445 LTA4HP09960 611 aaKnown RBP15.14■□□□□ 0.01
VARS-216ENST00000428445 BMP7P18075 431 aa15.14■□□□□ 0.01
VARS-216ENST00000428445 BUD31P41223 144 aaPredicted RBP15.14■□□□□ 0.01
VARS-216ENST00000428445 TRADDQ15628 312 aa15.14■□□□□ 0.01
VARS-216ENST00000428445 WIPI1Q5MNZ9 446 aaPredicted RBP15.14■□□□□ 0.01
VARS-216ENST00000428445 CYP20A1Q6UW02 462 aa15.14■□□□□ 0.01
VARS-216ENST00000428445 DND1Q8IYX4 353 aaKnown RBP15.14■□□□□ 0.01
VARS-216ENST00000428445 SPPL2AQ8TCT8 520 aa15.14■□□□□ 0.01
VARS-216ENST00000428445 FAM222BQ8WU58 562 aa15.14■□□□□ 0.01
VARS-216ENST00000428445 UBTD2Q8WUN7 234 aa15.14■□□□□ 0.01
VARS-216ENST00000428445 MRRFQ96E11 262 aaKnown RBP15.14■□□□□ 0.01
VARS-216ENST00000428445 NMRAL1Q9HBL8 299 aa15.14■□□□□ 0.01
VARS-216ENST00000428445 TEX10Q9NXF1 929 aaPredicted RBP15.14■□□□□ 0.01
VARS-216ENST00000428445 QPCTLQ9NXS2 382 aa15.14■□□□□ 0.01
VARS-216ENST00000428445 PSD3Q9NYI0 1048 aa15.14■□□□□ 0.01
VARS-216ENST00000428445 GRHL1Q9NZI5 618 aa15.14■□□□□ 0.01
VARS-216ENST00000428445 RPH3AQ9Y2J0 694 aaPredicted RBP15.14■□□□□ 0.01
VARS-216ENST00000428445 RNF11Q9Y3C5 154 aa15.14■□□□□ 0.01
VARS-216ENST00000428445 TSC22D4Q9Y3Q8 395 aa15.14■□□□□ 0.01
VARS-216ENST00000428445 ANGPTL3Q9Y5C1 460 aa15.14■□□□□ 0.01
VARS-216ENST00000428445 PCDHGB3Q9Y5G1 929 aa15.14■□□□□ 0.01
VARS-216ENST00000428445 NPFFR2Q9Y5X5 522 aa15.14■□□□□ 0.01
VARS-216ENST00000428445 IL2RAP01589 272 aa15.13■□□□□ 0.01
VARS-216ENST00000428445 NR2F6P10588 404 aa15.13■□□□□ 0.01
VARS-216ENST00000428445 FLNAP21333 2647 aaKnown RBP15.13■□□□□ 0.01
VARS-216ENST00000428445 PTX3P26022 381 aaPredicted RBP15.13■□□□□ 0.01
VARS-216ENST00000428445 CRABP2P29373 138 aa15.13■□□□□ 0.01
VARS-216ENST00000428445 TIMP3P35625 211 aa15.13■□□□□ 0.01
VARS-216ENST00000428445 PIK3CBP42338 1070 aa15.13■□□□□ 0.01
VARS-216ENST00000428445 CDK9P50750 372 aaKnown RBP15.13■□□□□ 0.01
VARS-216ENST00000428445 CAV1Q03135 178 aa15.13■□□□□ 0.01
VARS-216ENST00000428445 POU4F3Q15319 338 aa15.13■□□□□ 0.01
VARS-216ENST00000428445 NNATQ16517 81 aa15.13■□□□□ 0.01
VARS-216ENST00000428445 PFKFB4Q16877 469 aa15.13■□□□□ 0.01
VARS-216ENST00000428445 FBXW10Q5XX13 1052 aa15.13■□□□□ 0.01
VARS-216ENST00000428445 TBC1D1Q86TI0 1168 aaPredicted RBP15.13■□□□□ 0.01
VARS-216ENST00000428445 YRDCQ86U90 279 aaKnown RBP15.13■□□□□ 0.01
VARS-216ENST00000428445 TAGAPQ8N103 731 aa15.13■□□□□ 0.01
VARS-216ENST00000428445 WFDC11Q8NEX6 87 aa15.13■□□□□ 0.01
VARS-216ENST00000428445 FBF1Q8TES7 1133 aa15.13■□□□□ 0.01
VARS-216ENST00000428445 ADIPOR1Q96A54 375 aa15.13■□□□□ 0.01
VARS-216ENST00000428445 WDYHV1Q96HA8 205 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms