RNA–Protein interactions for RNA: ENST00000428153.6

DDR1-235, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 1,257 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-235ENST00000428153 CXXC4Q9H2H0 198 aa16■□□□□ 0.15
DDR1-235ENST00000428153 ZNF469Q96JG9 3925 aaPredicted RBP16■□□□□ 0.15
DDR1-235ENST00000428153 A0A1W2PR48 441 aa15.99■□□□□ 0.15
DDR1-235ENST00000428153 SYT5O00445 386 aa15.99■□□□□ 0.15
DDR1-235ENST00000428153 TMPRSS11DO60235 418 aa15.99■□□□□ 0.15
DDR1-235ENST00000428153 EEDO75530 441 aaKnown RBP15.99■□□□□ 0.15
DDR1-235ENST00000428153 CTAG2O75638 210 aa15.99■□□□□ 0.15
DDR1-235ENST00000428153 KLHL2O95198 593 aa15.99■□□□□ 0.15
DDR1-235ENST00000428153 SNX4O95219 450 aa15.99■□□□□ 0.15
DDR1-235ENST00000428153 C2P06681 752 aa15.99■□□□□ 0.15
DDR1-235ENST00000428153 GMPRP36959 345 aa15.99■□□□□ 0.15
DDR1-235ENST00000428153 ART1P52961 327 aa15.99■□□□□ 0.15
DDR1-235ENST00000428153 DLX5P56178 289 aa15.99■□□□□ 0.15
DDR1-235ENST00000428153 RPP38P78345 283 aaKnown RBP15.99■□□□□ 0.15
DDR1-235ENST00000428153 FUT7Q11130 342 aa15.99■□□□□ 0.15
DDR1-235ENST00000428153 GTF2H2Q13888 395 aa15.99■□□□□ 0.15
DDR1-235ENST00000428153 PRAMEF20Q5VT98 475 aa15.99■□□□□ 0.15
DDR1-235ENST00000428153 TMEM198Q66K66 360 aa15.99■□□□□ 0.15
DDR1-235ENST00000428153 GTF2H2CQ6P1K8 395 aa15.99■□□□□ 0.15
DDR1-235ENST00000428153 KLC3Q6P597 504 aa15.99■□□□□ 0.15
DDR1-235ENST00000428153 PM20D2Q8IYS1 436 aa15.99■□□□□ 0.15
DDR1-235ENST00000428153 LIX1Q8N485 282 aa15.99■□□□□ 0.15
DDR1-235ENST00000428153 RNF175Q8N4F7 328 aa15.99■□□□□ 0.15
DDR1-235ENST00000428153 KCTD4Q8WVF5 259 aa15.99■□□□□ 0.15
DDR1-235ENST00000428153 GAL3ST4Q96RP7 486 aa15.99■□□□□ 0.15
DDR1-235ENST00000428153 SERPINI1Q99574 410 aa15.99■□□□□ 0.15
DDR1-235ENST00000428153 FOXC2Q99958 501 aa15.99■□□□□ 0.15
DDR1-235ENST00000428153 IPPKQ9H8X2 491 aa15.99■□□□□ 0.15
DDR1-235ENST00000428153 CXorf21Q9HAI6 301 aa15.99■□□□□ 0.15
DDR1-235ENST00000428153 ZNF629Q9UEG4 869 aaPredicted RBP15.99■□□□□ 0.15
DDR1-235ENST00000428153 FOXD3Q9UJU5 478 aaPredicted RBP15.99■□□□□ 0.15
DDR1-235ENST00000428153 EDARQ9UNE0 448 aa15.99■□□□□ 0.15
DDR1-235ENST00000428153 ABCA4P78363 2273 aa15.98■□□□□ 0.15
DDR1-235ENST00000428153 C2orf92A0A1B0GVN3 265 aa15.98■□□□□ 0.15
DDR1-235ENST00000428153 DVL2O14641 736 aa15.98■□□□□ 0.15
DDR1-235ENST00000428153 AIFM1O95831 613 aa15.98■□□□□ 0.15
DDR1-235ENST00000428153 EPPINO95925 133 aa15.98■□□□□ 0.15
DDR1-235ENST00000428153 CLPSP04118 112 aa15.98■□□□□ 0.15
DDR1-235ENST00000428153 CEACAM8P31997 349 aaPredicted RBP15.98■□□□□ 0.15
DDR1-235ENST00000428153 TIMP3P35625 211 aa15.98■□□□□ 0.15
DDR1-235ENST00000428153 CPSF6Q16630 551 aaKnown RBP eCLIP15.98■□□□□ 0.15
DDR1-235ENST00000428153 WDR53Q7Z5U6 358 aaPredicted RBP15.98■□□□□ 0.15
DDR1-235ENST00000428153 CCDC25Q86WR0 208 aa15.98■□□□□ 0.15
DDR1-235ENST00000428153 LACC1Q8IV20 430 aa15.98■□□□□ 0.15
DDR1-235ENST00000428153 DIO2Q92813 273 aa15.98■□□□□ 0.15
DDR1-235ENST00000428153 UBQLN3Q9H347 655 aa15.98■□□□□ 0.15
DDR1-235ENST00000428153 DNAJB12Q9NXW2 375 aaKnown RBP15.98■□□□□ 0.15
DDR1-235ENST00000428153 ALKBH4Q9NXW9 302 aa15.98■□□□□ 0.15
DDR1-235ENST00000428153 ADAM29Q9UKF5 820 aa15.98■□□□□ 0.15
DDR1-235ENST00000428153 TMCO1Q9UM00 188 aa15.98■□□□□ 0.15
DDR1-235ENST00000428153 HRNRQ86YZ3 2850 aaPredicted RBP15.98■□□□□ 0.15
DDR1-235ENST00000428153 HMX2A2RU54 273 aa15.97■□□□□ 0.15
DDR1-235ENST00000428153 PRKRAO75569 313 aaKnown RBP15.97■□□□□ 0.15
DDR1-235ENST00000428153 CLDN9O95484 217 aa15.97■□□□□ 0.15
DDR1-235ENST00000428153 HPNP05981 417 aa15.97■□□□□ 0.15
DDR1-235ENST00000428153 KIR2DL3P43628 341 aa15.97■□□□□ 0.15
DDR1-235ENST00000428153 ASCL1P50553 236 aa15.97■□□□□ 0.15
DDR1-235ENST00000428153 NRG3P56975 720 aa15.97■□□□□ 0.15
DDR1-235ENST00000428153 NHSL2Q5HYW2 709 aa15.97■□□□□ 0.15
DDR1-235ENST00000428153 MROH9Q5TGP6 573 aa15.97■□□□□ 0.15
DDR1-235ENST00000428153 TMEM81Q6P7N7 255 aa15.97■□□□□ 0.15
DDR1-235ENST00000428153 ZDHHC24Q6UX98 284 aa15.97■□□□□ 0.15
DDR1-235ENST00000428153 SEM1Q6ZVN7 128 aa15.97■□□□□ 0.15
DDR1-235ENST00000428153 GOLGA7Q7Z5G4 137 aa15.97■□□□□ 0.15
DDR1-235ENST00000428153 GALNT12Q8IXK2 581 aa15.97■□□□□ 0.15
DDR1-235ENST00000428153 OR7G1Q8NGA0 311 aa15.97■□□□□ 0.15
DDR1-235ENST00000428153 SPPL2AQ8TCT8 520 aa15.97■□□□□ 0.15
DDR1-235ENST00000428153 GPR78Q96P69 363 aa15.97■□□□□ 0.15
DDR1-235ENST00000428153 NTMT1Q9BV86 223 aa15.97■□□□□ 0.15
DDR1-235ENST00000428153 ANGPTL4Q9BY76 406 aa15.97■□□□□ 0.15
DDR1-235ENST00000428153 PRDM14Q9GZV8 571 aa15.97■□□□□ 0.15
DDR1-235ENST00000428153 SLC6A15Q9H2J7 730 aa15.97■□□□□ 0.15
DDR1-235ENST00000428153 NPFFR2Q9Y5X5 522 aa15.97■□□□□ 0.15
DDR1-235ENST00000428153 NCKAP5O14513 1909 aa15.96■□□□□ 0.15
DDR1-235ENST00000428153 A0A096LPK6 155 aa15.96■□□□□ 0.15
DDR1-235ENST00000428153 FREM3P0C091 2139 aa15.96■□□□□ 0.15
DDR1-235ENST00000428153 NAGAP17050 411 aa15.96■□□□□ 0.15
DDR1-235ENST00000428153 GDF1P27539 372 aa15.96■□□□□ 0.15
DDR1-235ENST00000428153 PIK3R1P27986 724 aa15.96■□□□□ 0.15
DDR1-235ENST00000428153 SERPINB8P50452 374 aa15.96■□□□□ 0.15
DDR1-235ENST00000428153 IST1P53990 364 aa15.96■□□□□ 0.15
DDR1-235ENST00000428153 IRF9Q00978 393 aa15.96■□□□□ 0.15
DDR1-235ENST00000428153 CRYZQ08257 329 aaKnown RBP15.96■□□□□ 0.15
DDR1-235ENST00000428153 C2orf54Q08AI8 447 aa15.96■□□□□ 0.15
DDR1-235ENST00000428153 DUSP8Q13202 625 aa15.96■□□□□ 0.15
DDR1-235ENST00000428153 ACSF3Q4G176 576 aaPredicted RBP15.96■□□□□ 0.15
DDR1-235ENST00000428153 HLA-DQA1Q5Y7H0 255 aa15.96■□□□□ 0.15
DDR1-235ENST00000428153 PAGE2Q7Z2X7 111 aa15.96■□□□□ 0.15
DDR1-235ENST00000428153 ZNF572Q7Z3I7 529 aaPredicted RBP15.96■□□□□ 0.15
DDR1-235ENST00000428153 PACS2Q86VP3 889 aa15.96■□□□□ 0.15
DDR1-235ENST00000428153 ZNF615Q8N8J6 731 aa15.96■□□□□ 0.15
DDR1-235ENST00000428153 CHDHQ8NE62 594 aaPredicted RBP15.96■□□□□ 0.15
DDR1-235ENST00000428153 FAM222BQ8WU58 562 aa15.96■□□□□ 0.15
DDR1-235ENST00000428153 ANP32BQ92688 251 aaKnown RBP15.96■□□□□ 0.15
DDR1-235ENST00000428153 RNASE6Q93091 150 aaKnown RBP15.96■□□□□ 0.15
DDR1-235ENST00000428153 ADIPOR1Q96A54 375 aa15.96■□□□□ 0.15
DDR1-235ENST00000428153 NTNG2Q96CW9 530 aa15.96■□□□□ 0.15
DDR1-235ENST00000428153 RASSF1Q9NS23 344 aa15.96■□□□□ 0.15
DDR1-235ENST00000428153 AHSPQ9NZD4 102 aa15.96■□□□□ 0.15
DDR1-235ENST00000428153 MTRF1LQ9UGC7 380 aaKnown RBP15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms