RNA–Protein interactions for RNA: ENST00000427724.6

TCOF1-204, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5

Gene TCOF1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-204ENST00000427724 TMEM246Q9BRR3 403 aa10.13□□□□□ -0.79
TCOF1-204ENST00000427724 FUNDC2Q9BWH2 189 aa10.13□□□□□ -0.79
TCOF1-204ENST00000427724 OR6C2Q9NZP2 312 aa10.13□□□□□ -0.79
TCOF1-204ENST00000427724 CORO2BQ9UQ03 480 aa10.13□□□□□ -0.79
TCOF1-204ENST00000427724 LOC100130705A0A1B0GUX0 176 aa10.13□□□□□ -0.79
TCOF1-204ENST00000427724 VSTM5A8MXK1 200 aa10.13□□□□□ -0.79
TCOF1-204ENST00000427724 MAGEB17A8MXT2 336 aa10.13□□□□□ -0.79
TCOF1-204ENST00000427724 AREL1O15033 823 aa10.13□□□□□ -0.79
TCOF1-204ENST00000427724 FABP3P05413 133 aa10.13□□□□□ -0.79
TCOF1-204ENST00000427724 BMP1P13497 986 aa10.13□□□□□ -0.79
TCOF1-204ENST00000427724 BCKDHBP21953 392 aa10.13□□□□□ -0.79
TCOF1-204ENST00000427724 NCF4Q15080 339 aa10.13□□□□□ -0.79
TCOF1-204ENST00000427724 CNTN4Q8IWV2 1026 aa10.13□□□□□ -0.79
TCOF1-204ENST00000427724 ELMOD2Q8IZ81 293 aa10.13□□□□□ -0.79
TCOF1-204ENST00000427724 ASCC1Q8N9N2 400 aaKnown RBP10.13□□□□□ -0.79
TCOF1-204ENST00000427724 TBC1D15Q8TC07 691 aa10.13□□□□□ -0.79
TCOF1-204ENST00000427724 PEX13Q92968 403 aa10.13□□□□□ -0.79
TCOF1-204ENST00000427724 DCSTAMPQ9H295 470 aa10.13□□□□□ -0.79
TCOF1-204ENST00000427724 ZNF304Q9HCX3 659 aa10.13□□□□□ -0.79
TCOF1-204ENST00000427724 CCNB1IP1Q9NPC3 277 aa10.13□□□□□ -0.79
TCOF1-204ENST00000427724 SDR39U1Q9NRG7 319 aaPredicted RBP10.13□□□□□ -0.79
TCOF1-204ENST00000427724 MAGED1Q9Y5V3 778 aaPredicted RBP10.13□□□□□ -0.79
TCOF1-204ENST00000427724 DUXAA6NLW8 204 aa10.13□□□□□ -0.79
TCOF1-204ENST00000427724 PRR23D1E9PI22 279 aaPredicted RBP10.13□□□□□ -0.79
TCOF1-204ENST00000427724 GPR37L1O60883 481 aa10.13□□□□□ -0.79
TCOF1-204ENST00000427724 CSO75390 466 aaKnown RBP10.13□□□□□ -0.79
TCOF1-204ENST00000427724 PRR23D2P0DMB1 279 aaPredicted RBP10.13□□□□□ -0.79
TCOF1-204ENST00000427724 MAGEA12P43365 314 aa10.13□□□□□ -0.79
TCOF1-204ENST00000427724 KCNC1P48547 511 aa10.13□□□□□ -0.79
TCOF1-204ENST00000427724 GPR18Q14330 331 aa10.13□□□□□ -0.79
TCOF1-204ENST00000427724 QPRTQ15274 297 aa10.13□□□□□ -0.79
TCOF1-204ENST00000427724 NPTX1Q15818 432 aa10.13□□□□□ -0.79
TCOF1-204ENST00000427724 FAM219BQ5XKK7 198 aa10.13□□□□□ -0.79
TCOF1-204ENST00000427724 ANKRD26P1Q6NSI1 321 aa10.13□□□□□ -0.79
TCOF1-204ENST00000427724 ADGRG5Q8IZF4 528 aa10.13□□□□□ -0.79
TCOF1-204ENST00000427724 CCL4L1Q8NHW4 92 aa10.13□□□□□ -0.79
TCOF1-204ENST00000427724 BEX2Q9BXY8 128 aa10.13□□□□□ -0.79
TCOF1-204ENST00000427724 CD244Q9BZW8 370 aa10.13□□□□□ -0.79
TCOF1-204ENST00000427724 SIAEQ9HAT2 523 aa10.13□□□□□ -0.79
TCOF1-204ENST00000427724 SLAMF8Q9P0V8 285 aa10.13□□□□□ -0.79
TCOF1-204ENST00000427724 MAN2B2Q9Y2E5 1009 aa10.13□□□□□ -0.79
TCOF1-204ENST00000427724 STX16O14662 325 aa10.13□□□□□ -0.79
TCOF1-204ENST00000427724 TLX3O43711 291 aaPredicted RBP10.13□□□□□ -0.79
TCOF1-204ENST00000427724 MYF6P23409 242 aa10.13□□□□□ -0.79
TCOF1-204ENST00000427724 CCR5P51681 352 aa10.13□□□□□ -0.79
TCOF1-204ENST00000427724 RRADP55042 308 aa10.13□□□□□ -0.79
TCOF1-204ENST00000427724 CD83Q01151 205 aa10.13□□□□□ -0.79
TCOF1-204ENST00000427724 PLCXD2Q0VAA5 305 aa10.13□□□□□ -0.79
TCOF1-204ENST00000427724 SEMA3BQ13214 749 aa10.13□□□□□ -0.79
TCOF1-204ENST00000427724 IL18R1Q13478 541 aa10.13□□□□□ -0.79
TCOF1-204ENST00000427724 ENPP2Q13822 863 aa10.13□□□□□ -0.79
TCOF1-204ENST00000427724 DOC2AQ14183 400 aa10.13□□□□□ -0.79
TCOF1-204ENST00000427724 PDSS1Q5T2R2 415 aa10.13□□□□□ -0.79
TCOF1-204ENST00000427724 KLHDC8AQ8IYD2 350 aa10.13□□□□□ -0.79
TCOF1-204ENST00000427724 CYP4Z2PQ8N1L4 340 aa10.13□□□□□ -0.79
TCOF1-204ENST00000427724 SLC5A8Q8N695 610 aa10.13□□□□□ -0.79
TCOF1-204ENST00000427724 KRTCAP2Q8N6L1 136 aa10.13□□□□□ -0.79
TCOF1-204ENST00000427724 GLB1L3Q8NCI6 653 aaPredicted RBP10.13□□□□□ -0.79
TCOF1-204ENST00000427724 OR8H1Q8NGG4 311 aa10.13□□□□□ -0.79
TCOF1-204ENST00000427724 MYDGFQ969H8 173 aa10.13□□□□□ -0.79
TCOF1-204ENST00000427724 ISL2Q96A47 359 aa10.13□□□□□ -0.79
TCOF1-204ENST00000427724 KCNC2Q96PR1 638 aa10.13□□□□□ -0.79
TCOF1-204ENST00000427724 PKP4Q99569 1192 aa10.13□□□□□ -0.79
TCOF1-204ENST00000427724 CDADC1Q9BWV3 514 aa10.13□□□□□ -0.79
TCOF1-204ENST00000427724 YTHDF1Q9BYJ9 559 aaKnown RBP10.13□□□□□ -0.79
TCOF1-204ENST00000427724 LHPPQ9H008 270 aa10.13□□□□□ -0.79
TCOF1-204ENST00000427724 HDHD2Q9H0R4 259 aa10.13□□□□□ -0.79
TCOF1-204ENST00000427724 TP63Q9H3D4 680 aaPredicted RBP10.13□□□□□ -0.79
TCOF1-204ENST00000427724 EPHX3Q9H6B9 360 aa10.13□□□□□ -0.79
TCOF1-204ENST00000427724 ARMC1Q9NVT9 282 aa10.13□□□□□ -0.79
TCOF1-204ENST00000427724 TRPS1Q9UHF7 1281 aa10.13□□□□□ -0.79
TCOF1-204ENST00000427724 ZFR2Q9UPR6 939 aaKnown RBP10.13□□□□□ -0.79
TCOF1-204ENST00000427724 KIAA1217Q5T5P2 1943 aa10.12□□□□□ -0.79
TCOF1-204ENST00000427724 TRIP11Q15643 1979 aa10.12□□□□□ -0.79
TCOF1-204ENST00000427724 CASKO14936 926 aa10.12□□□□□ -0.79
TCOF1-204ENST00000427724 CREG1O75629 220 aa10.12□□□□□ -0.79
TCOF1-204ENST00000427724 OPN1SWP03999 348 aa10.12□□□□□ -0.79
TCOF1-204ENST00000427724 RETP07949 1114 aa10.12□□□□□ -0.79
TCOF1-204ENST00000427724 CXCR1P25024 350 aa10.12□□□□□ -0.79
TCOF1-204ENST00000427724 EMX2Q04743 252 aa10.12□□□□□ -0.79
TCOF1-204ENST00000427724 GALNT1Q10472 559 aaPredicted RBP10.12□□□□□ -0.79
TCOF1-204ENST00000427724 RBM48Q5RL73 367 aaKnown RBP10.12□□□□□ -0.79
TCOF1-204ENST00000427724 NUP54Q7Z3B4 507 aa10.12□□□□□ -0.79
TCOF1-204ENST00000427724 PDZD3Q86UT5 571 aa10.12□□□□□ -0.79
TCOF1-204ENST00000427724 C11orf65Q8NCR3 313 aa10.12□□□□□ -0.79
TCOF1-204ENST00000427724 OR2L2Q8NH16 312 aa10.12□□□□□ -0.79
TCOF1-204ENST00000427724 GRPEL2Q8TAA5 225 aa10.12□□□□□ -0.79
TCOF1-204ENST00000427724 FUBP1Q96AE4 644 aaKnown RBP10.12□□□□□ -0.79
TCOF1-204ENST00000427724 CLEC4MQ9H2X3 399 aaPredicted RBP10.12□□□□□ -0.79
TCOF1-204ENST00000427724 OLAHQ9NV23 265 aa10.12□□□□□ -0.79
TCOF1-204ENST00000427724 TMEM184CQ9NVA4 438 aa10.12□□□□□ -0.79
TCOF1-204ENST00000427724 USP22Q9UPT9 525 aa10.12□□□□□ -0.79
TCOF1-204ENST00000427724 ABCA7Q8IZY2 2146 aa10.12□□□□□ -0.79
TCOF1-204ENST00000427724 DOCK5Q9H7D0 1870 aa10.12□□□□□ -0.79
TCOF1-204ENST00000427724 GPR89AB7ZAQ6 455 aa10.12□□□□□ -0.79
TCOF1-204ENST00000427724 K7ESM1 405 aa10.12□□□□□ -0.79
TCOF1-204ENST00000427724 SGK494L7N484 410 aa10.12□□□□□ -0.79
TCOF1-204ENST00000427724 M0QX08 132 aa10.12□□□□□ -0.79
TCOF1-204ENST00000427724 XKRYO14609 159 aa10.12□□□□□ -0.79
TCOF1-204ENST00000427724 NOS1APO75052 506 aaPredicted RBP10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms