RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 I3L1I5 382 aaPredicted RBP14.71□□□□□ -0.05
SHOX2-202ENST00000425436 TAF4O00268 1085 aa14.71□□□□□ -0.05
SHOX2-202ENST00000425436 DSCR3O14972 297 aa14.71□□□□□ -0.05
SHOX2-202ENST00000425436 KLK1P06870 262 aa14.71□□□□□ -0.05
SHOX2-202ENST00000425436 KLK3P07288 261 aaPredicted RBP14.71□□□□□ -0.05
SHOX2-202ENST00000425436 ABCB1P08183 1280 aaPredicted RBP14.71□□□□□ -0.05
SHOX2-202ENST00000425436 LIPCP11150 499 aa14.71□□□□□ -0.05
SHOX2-202ENST00000425436 PIM1P11309 404 aaPredicted RBP14.71□□□□□ -0.05
SHOX2-202ENST00000425436 RGS1Q08116 209 aa14.71□□□□□ -0.05
SHOX2-202ENST00000425436 C2orf80Q0P641 193 aa14.71□□□□□ -0.05
SHOX2-202ENST00000425436 HEPACAMQ14CZ8 416 aa14.71□□□□□ -0.05
SHOX2-202ENST00000425436 TOR1AIP1Q5JTV8 583 aa14.71□□□□□ -0.05
SHOX2-202ENST00000425436 CCNYL2Q5T2Q4 361 aa14.71□□□□□ -0.05
SHOX2-202ENST00000425436 CPZQ66K79 652 aa14.71□□□□□ -0.05
SHOX2-202ENST00000425436 DNAJC14Q6Y2X3 702 aaPredicted RBP14.71□□□□□ -0.05
SHOX2-202ENST00000425436 AMIGO2Q86SJ2 522 aa14.71□□□□□ -0.05
SHOX2-202ENST00000425436 MARVELD2Q8N4S9 558 aa14.71□□□□□ -0.05
SHOX2-202ENST00000425436 IL22RA1Q8N6P7 574 aa14.71□□□□□ -0.05
SHOX2-202ENST00000425436 FAM162AQ96A26 154 aa14.71□□□□□ -0.05
SHOX2-202ENST00000425436 ZNF597Q96LX8 424 aa14.71□□□□□ -0.05
SHOX2-202ENST00000425436 DCBLD2Q96PD2 775 aa14.71□□□□□ -0.05
SHOX2-202ENST00000425436 CHST8Q9H2A9 424 aa14.71□□□□□ -0.05
SHOX2-202ENST00000425436 SEMA6AQ9H2E6 1030 aa14.71□□□□□ -0.05
SHOX2-202ENST00000425436 RAD21L1Q9H4I0 556 aa14.71□□□□□ -0.05
SHOX2-202ENST00000425436 COQ10BQ9H8M1 238 aa14.71□□□□□ -0.05
SHOX2-202ENST00000425436 LHX9Q9NQ69 397 aa14.71□□□□□ -0.05
SHOX2-202ENST00000425436 SRPK3Q9UPE1 567 aa14.71□□□□□ -0.05
SHOX2-202ENST00000425436 RAXQ9Y2V3 346 aa14.71□□□□□ -0.05
SHOX2-202ENST00000425436 APC2O95996 2303 aa14.71□□□□□ -0.05
SHOX2-202ENST00000425436 LAMA5O15230 3695 aa14.71□□□□□ -0.05
SHOX2-202ENST00000425436 LOC101059948A0A1B0GTJ6 334 aa14.71□□□□□ -0.06
SHOX2-202ENST00000425436 A0A1B0GX78 115 aa14.71□□□□□ -0.06
SHOX2-202ENST00000425436 LRIT2A6NDA9 550 aa14.71□□□□□ -0.06
SHOX2-202ENST00000425436 FOXS1O43638 330 aa14.71□□□□□ -0.06
SHOX2-202ENST00000425436 DEAF1O75398 565 aaPredicted RBP14.71□□□□□ -0.06
SHOX2-202ENST00000425436 CREG1O75629 220 aa14.71□□□□□ -0.06
SHOX2-202ENST00000425436 CPSF4O95639 269 aaKnown RBP14.71□□□□□ -0.06
SHOX2-202ENST00000425436 FURINP09958 794 aa14.71□□□□□ -0.06
SHOX2-202ENST00000425436 ZNF888P0CJ79 500 aaPredicted RBP14.71□□□□□ -0.06
SHOX2-202ENST00000425436 RAB8AP61006 207 aa14.71□□□□□ -0.06
SHOX2-202ENST00000425436 SRSF6Q13247 344 aaKnown RBP14.71□□□□□ -0.06
SHOX2-202ENST00000425436 CLN3Q13286 438 aa14.71□□□□□ -0.06
SHOX2-202ENST00000425436 VEZF1Q14119 521 aa14.71□□□□□ -0.06
SHOX2-202ENST00000425436 MANEAQ5SRI9 462 aa14.71□□□□□ -0.06
SHOX2-202ENST00000425436 YOD1Q5VVQ6 348 aaPredicted RBP14.71□□□□□ -0.06
SHOX2-202ENST00000425436 ZNF385CQ66K41 422 aaPredicted RBP14.71□□□□□ -0.06
SHOX2-202ENST00000425436 HMBOX1Q6NT76 420 aa14.71□□□□□ -0.06
SHOX2-202ENST00000425436 VASH2Q86V25 355 aa14.71□□□□□ -0.06
SHOX2-202ENST00000425436 SHISA5Q8N114 240 aa14.71□□□□□ -0.06
SHOX2-202ENST00000425436 ESX1Q8N693 406 aa14.71□□□□□ -0.06
SHOX2-202ENST00000425436 ZNF248Q8NDW4 579 aa14.71□□□□□ -0.06
SHOX2-202ENST00000425436 SRFBP1Q8NEF9 429 aaKnown RBP14.71□□□□□ -0.06
SHOX2-202ENST00000425436 OR9A4Q8NGU2 314 aa14.71□□□□□ -0.06
SHOX2-202ENST00000425436 ZCCHC14Q8WYQ9 949 aaKnown RBP14.71□□□□□ -0.06
SHOX2-202ENST00000425436 MIEF2Q96C03 454 aa14.71□□□□□ -0.06
SHOX2-202ENST00000425436 ZNF764Q96H86 408 aaPredicted RBP14.71□□□□□ -0.06
SHOX2-202ENST00000425436 RNF145Q96MT1 663 aa14.71□□□□□ -0.06
SHOX2-202ENST00000425436 F2RL3Q96RI0 385 aa14.71□□□□□ -0.06
SHOX2-202ENST00000425436 SLC6A16Q9GZN6 736 aa14.71□□□□□ -0.06
SHOX2-202ENST00000425436 IKZF5Q9H5V7 419 aa14.71□□□□□ -0.06
SHOX2-202ENST00000425436 DCAF13Q9NV06 445 aaKnown RBP14.71□□□□□ -0.06
SHOX2-202ENST00000425436 ACACAQ13085 2346 aa14.7□□□□□ -0.06
SHOX2-202ENST00000425436 URB1O60287 2271 aaKnown RBP14.7□□□□□ -0.06
SHOX2-202ENST00000425436 CFAP47Q6ZTR5 3102 aa14.7□□□□□ -0.06
SHOX2-202ENST00000425436 A0A0G2JN53 185 aa14.7□□□□□ -0.06
SHOX2-202ENST00000425436 C4orf51C9J302 202 aa14.7□□□□□ -0.06
SHOX2-202ENST00000425436 SAP18O00422 153 aaKnown RBP14.7□□□□□ -0.06
SHOX2-202ENST00000425436 KLK10O43240 276 aa14.7□□□□□ -0.06
SHOX2-202ENST00000425436 GSNP06396 782 aa14.7□□□□□ -0.06
SHOX2-202ENST00000425436 TCN2P20062 427 aa14.7□□□□□ -0.06
SHOX2-202ENST00000425436 AGXTP21549 392 aa14.7□□□□□ -0.06
SHOX2-202ENST00000425436 EIF2S3P41091 472 aaKnown RBP14.7□□□□□ -0.06
SHOX2-202ENST00000425436 CDKN2CP42773 168 aa14.7□□□□□ -0.06
SHOX2-202ENST00000425436 EMP3P54852 163 aa14.7□□□□□ -0.06
SHOX2-202ENST00000425436 TAS2R50P59544 299 aa14.7□□□□□ -0.06
SHOX2-202ENST00000425436 DCDP81605 110 aaKnown RBP14.7□□□□□ -0.06
SHOX2-202ENST00000425436 NDUFA9Q16795 377 aa14.7□□□□□ -0.06
SHOX2-202ENST00000425436 GTDC1Q4AE62 458 aa14.7□□□□□ -0.06
SHOX2-202ENST00000425436 NKAIN1Q4KMZ8 207 aa14.7□□□□□ -0.06
SHOX2-202ENST00000425436 GARNL3Q5VVW2 1013 aa14.7□□□□□ -0.06
SHOX2-202ENST00000425436 MLIPQ5VWP3 458 aa14.7□□□□□ -0.06
SHOX2-202ENST00000425436 GALNT4Q8N4A0 578 aa14.7□□□□□ -0.06
SHOX2-202ENST00000425436 SNIP1Q8TAD8 396 aaKnown RBP14.7□□□□□ -0.06
SHOX2-202ENST00000425436 UTP15Q8TED0 518 aaKnown RBP14.7□□□□□ -0.06
SHOX2-202ENST00000425436 CT55Q8WUE5 264 aa14.7□□□□□ -0.06
SHOX2-202ENST00000425436 KCNE4Q8WWG9 221 aa14.7□□□□□ -0.06
SHOX2-202ENST00000425436 COL26A1Q96A83 441 aa14.7□□□□□ -0.06
SHOX2-202ENST00000425436 MMABQ96EY8 250 aaPredicted RBP14.7□□□□□ -0.06
SHOX2-202ENST00000425436 LRFN5Q96NI6 719 aa14.7□□□□□ -0.06
SHOX2-202ENST00000425436 TBCDQ9BTW9 1192 aa14.7□□□□□ -0.06
SHOX2-202ENST00000425436 TPT1P8Q9HAU6 139 aa14.7□□□□□ -0.06
SHOX2-202ENST00000425436 MIEF1Q9NQG6 463 aa14.7□□□□□ -0.06
SHOX2-202ENST00000425436 SLC22A11Q9NSA0 550 aa14.7□□□□□ -0.06
SHOX2-202ENST00000425436 SLC6A13Q9NSD5 602 aa14.7□□□□□ -0.06
SHOX2-202ENST00000425436 RPS6KA6Q9UK32 745 aa14.7□□□□□ -0.06
SHOX2-202ENST00000425436 SAMD4AQ9UPU9 718 aaKnown RBP14.7□□□□□ -0.06
SHOX2-202ENST00000425436 NAALAD2Q9Y3Q0 740 aa14.7□□□□□ -0.06
SHOX2-202ENST00000425436 SCN2AQ99250 2005 aa14.69□□□□□ -0.06
SHOX2-202ENST00000425436 RNF103-CHMP3A0A140T963 221 aa14.69□□□□□ -0.06
SHOX2-202ENST00000425436 ZNF860A6NHJ4 632 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms