RNA–Protein interactions for RNA: ENST00000424937.1

PTCHD3P2-201, Transcript of patched domain containing 3 pseudogene 2, humanhuman

BASIC

Gene PTCHD3P2, Length 1,205 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P2-201ENST00000424937 ZNF780BQ9Y6R6 833 aa20.69■□□□□ 0.9
PTCHD3P2-201ENST00000424937 DOPEY2Q9Y3R5 2298 aa20.69■□□□□ 0.9
PTCHD3P2-201ENST00000424937 TM9SF1O15321 606 aa20.68■□□□□ 0.9
PTCHD3P2-201ENST00000424937 RGS14O43566 566 aa20.68■□□□□ 0.9
PTCHD3P2-201ENST00000424937 CLPSP04118 112 aa20.68■□□□□ 0.9
PTCHD3P2-201ENST00000424937 NEFHP12036 1026 aa20.68■□□□□ 0.9
PTCHD3P2-201ENST00000424937 DRD2P14416 443 aa20.68■□□□□ 0.9
PTCHD3P2-201ENST00000424937 CSNK2A2P19784 350 aaPredicted RBP20.68■□□□□ 0.9
PTCHD3P2-201ENST00000424937 GSTM5P46439 218 aa20.68■□□□□ 0.9
PTCHD3P2-201ENST00000424937 TDGF1P3P51864 188 aa20.68■□□□□ 0.9
PTCHD3P2-201ENST00000424937 DUSP2Q05923 314 aa20.68■□□□□ 0.9
PTCHD3P2-201ENST00000424937 HEPACAMQ14CZ8 416 aa20.68■□□□□ 0.9
PTCHD3P2-201ENST00000424937 SH2D4BQ5SQS7 431 aa20.68■□□□□ 0.9
PTCHD3P2-201ENST00000424937 PNPLA5Q7Z6Z6 429 aaPredicted RBP20.68■□□□□ 0.9
PTCHD3P2-201ENST00000424937 GPALPP1Q8IXQ4 340 aa20.68■□□□□ 0.9
PTCHD3P2-201ENST00000424937 LRRC25Q8N386 305 aaPredicted RBP20.68■□□□□ 0.9
PTCHD3P2-201ENST00000424937 DNAJB8Q8NHS0 232 aa20.68■□□□□ 0.9
PTCHD3P2-201ENST00000424937 TWIST2Q8WVJ9 160 aa20.68■□□□□ 0.9
PTCHD3P2-201ENST00000424937 EXOSC8Q96B26 276 aaKnown RBP20.68■□□□□ 0.9
PTCHD3P2-201ENST00000424937 CNRIP1Q96F85 164 aaPredicted RBP20.68■□□□□ 0.9
PTCHD3P2-201ENST00000424937 FRMD6Q96NE9 622 aa20.68■□□□□ 0.9
PTCHD3P2-201ENST00000424937 BRINP2Q9C0B6 783 aa20.68■□□□□ 0.9
PTCHD3P2-201ENST00000424937 WWTR1Q9GZV5 400 aa20.68■□□□□ 0.9
PTCHD3P2-201ENST00000424937 TUBB1Q9H4B7 451 aa20.68■□□□□ 0.9
PTCHD3P2-201ENST00000424937 KCNK9Q9NPC2 374 aa20.68■□□□□ 0.9
PTCHD3P2-201ENST00000424937 KLF13Q9Y2Y9 288 aaPredicted RBP20.68■□□□□ 0.9
PTCHD3P2-201ENST00000424937 TRAF6Q9Y4K3 522 aa20.68■□□□□ 0.9
PTCHD3P2-201ENST00000424937 CCL27Q9Y4X3 112 aa20.68■□□□□ 0.9
PTCHD3P2-201ENST00000424937 DNAJC15Q9Y5T4 150 aa20.68■□□□□ 0.9
PTCHD3P2-201ENST00000424937 ACTL7BQ9Y614 415 aa20.68■□□□□ 0.9
PTCHD3P2-201ENST00000424937 WDR91A4D1P6 747 aa20.67■□□□□ 0.9
PTCHD3P2-201ENST00000424937 OR6C76A6NM76 312 aa20.67■□□□□ 0.9
PTCHD3P2-201ENST00000424937 ZNF354AO60765 605 aaPredicted RBP20.67■□□□□ 0.9
PTCHD3P2-201ENST00000424937 SEC22BO75396 215 aa20.67■□□□□ 0.9
PTCHD3P2-201ENST00000424937 ATP1B1P05026 303 aa20.67■□□□□ 0.9
PTCHD3P2-201ENST00000424937 LINC00032P0C843 101 aa20.67■□□□□ 0.9
PTCHD3P2-201ENST00000424937 MST1P26927 711 aa20.67■□□□□ 0.9
PTCHD3P2-201ENST00000424937 ARRB2P32121 409 aa20.67■□□□□ 0.9
PTCHD3P2-201ENST00000424937 EBPQ15125 230 aaKnown RBP20.67■□□□□ 0.9
PTCHD3P2-201ENST00000424937 LTB4RQ15722 352 aa20.67■□□□□ 0.9
PTCHD3P2-201ENST00000424937 MPEG1Q2M385 716 aa20.67■□□□□ 0.9
PTCHD3P2-201ENST00000424937 FHL5Q5TD97 284 aa20.67■□□□□ 0.9
PTCHD3P2-201ENST00000424937 RNF165Q6ZSG1 346 aa20.67■□□□□ 0.9
PTCHD3P2-201ENST00000424937 MDGA2Q7Z553 956 aa20.67■□□□□ 0.9
PTCHD3P2-201ENST00000424937 DDIASQ8IXT1 998 aa20.67■□□□□ 0.9
PTCHD3P2-201ENST00000424937 VWA5B2Q8N398 1253 aa20.67■□□□□ 0.9
PTCHD3P2-201ENST00000424937 OR2T11Q8NH01 316 aa20.67■□□□□ 0.9
PTCHD3P2-201ENST00000424937 FAM76AQ8TAV0 307 aa20.67■□□□□ 0.9
PTCHD3P2-201ENST00000424937 SLC22A8Q8TCC7 542 aa20.67■□□□□ 0.9
PTCHD3P2-201ENST00000424937 STMN4Q9H169 189 aaPredicted RBP20.67■□□□□ 0.9
PTCHD3P2-201ENST00000424937 LRTM1Q9HBL6 345 aa20.67■□□□□ 0.9
PTCHD3P2-201ENST00000424937 TIMMDC1Q9NPL8 285 aa20.67■□□□□ 0.9
PTCHD3P2-201ENST00000424937 ENTPD4Q9Y227 616 aa20.67■□□□□ 0.9
PTCHD3P2-201ENST00000424937 ASPDHA6ND91 283 aa20.66■□□□□ 0.9
PTCHD3P2-201ENST00000424937 ZWINTO95229 277 aa20.66■□□□□ 0.9
PTCHD3P2-201ENST00000424937 FGF4P08620 206 aa20.66■□□□□ 0.9
PTCHD3P2-201ENST00000424937 PRPH2P23942 346 aa20.66■□□□□ 0.9
PTCHD3P2-201ENST00000424937 MEOX1P50221 254 aa20.66■□□□□ 0.9
PTCHD3P2-201ENST00000424937 SRSF1Q07955 248 aaKnown RBP eCLIP20.66■□□□□ 0.9
PTCHD3P2-201ENST00000424937 C2orf80Q0P641 193 aa20.66■□□□□ 0.9
PTCHD3P2-201ENST00000424937 FUT7Q11130 342 aa20.66■□□□□ 0.9
PTCHD3P2-201ENST00000424937 PRICKLE4Q2TBC4 344 aa20.66■□□□□ 0.9
PTCHD3P2-201ENST00000424937 PIGGQ5H8A4 983 aa20.66■□□□□ 0.9
PTCHD3P2-201ENST00000424937 NOXRED1Q6NXP6 359 aa20.66■□□□□ 0.9
PTCHD3P2-201ENST00000424937 FAM111BQ6SJ93 734 aa20.66■□□□□ 0.9
PTCHD3P2-201ENST00000424937 OPN5Q6U736 354 aa20.66■□□□□ 0.9
PTCHD3P2-201ENST00000424937 CLYBLQ8N0X4 340 aa20.66■□□□□ 0.9
PTCHD3P2-201ENST00000424937 FAM26EQ8N5C1 309 aa20.66■□□□□ 0.9
PTCHD3P2-201ENST00000424937 CPSF7Q8N684 471 aaKnown RBP20.66■□□□□ 0.9
PTCHD3P2-201ENST00000424937 PSD4Q8NDX1 1056 aa20.66■□□□□ 0.9
PTCHD3P2-201ENST00000424937 ADCY4Q8NFM4 1077 aa20.66■□□□□ 0.9
PTCHD3P2-201ENST00000424937 ZNF681Q96N22 645 aa20.66■□□□□ 0.9
PTCHD3P2-201ENST00000424937 MYNNQ9NPC7 610 aa20.66■□□□□ 0.9
PTCHD3P2-201ENST00000424937 GIMAP4Q9NUV9 329 aa20.66■□□□□ 0.9
PTCHD3P2-201ENST00000424937 C1orf109Q9NX04 203 aa20.66■□□□□ 0.9
PTCHD3P2-201ENST00000424937 MAT2BQ9NZL9 334 aa20.66■□□□□ 0.9
PTCHD3P2-201ENST00000424937 POLEQ07864 2286 aa20.65■□□□□ 0.9
PTCHD3P2-201ENST00000424937 PIP5K1BO14986 540 aa20.65■□□□□ 0.9
PTCHD3P2-201ENST00000424937 DDCP20711 480 aa20.65■□□□□ 0.9
PTCHD3P2-201ENST00000424937 GPR85P60893 370 aa20.65■□□□□ 0.9
PTCHD3P2-201ENST00000424937 ALDH6A1Q02252 535 aaKnown RBP20.65■□□□□ 0.9
PTCHD3P2-201ENST00000424937 UBAP2LQ14157 1087 aaKnown RBP20.65■□□□□ 0.9
PTCHD3P2-201ENST00000424937 CHI3L2Q15782 390 aa20.65■□□□□ 0.9
PTCHD3P2-201ENST00000424937 RTL4Q6ZR62 310 aa20.65■□□□□ 0.9
PTCHD3P2-201ENST00000424937 OR6Y1Q8NGX8 325 aa20.65■□□□□ 0.9
PTCHD3P2-201ENST00000424937 METTL2AQ96IZ6 378 aaKnown RBP20.65■□□□□ 0.9
PTCHD3P2-201ENST00000424937 TSPAN10Q9H1Z9 355 aaPredicted RBP20.65■□□□□ 0.9
PTCHD3P2-201ENST00000424937 OR10A5Q9H207 317 aa20.65■□□□□ 0.9
PTCHD3P2-201ENST00000424937 MIEF1Q9NQG6 463 aa20.65■□□□□ 0.9
PTCHD3P2-201ENST00000424937 EHD3Q9NZN3 535 aa20.65■□□□□ 0.9
PTCHD3P2-201ENST00000424937 C2orf92A0A1B0GVN3 265 aa20.64■□□□□ 0.89
PTCHD3P2-201ENST00000424937 CLEC18AA5D8T8 446 aa20.64■□□□□ 0.89
PTCHD3P2-201ENST00000424937 NPIPB8E9PQR5 432 aa20.64■□□□□ 0.89
PTCHD3P2-201ENST00000424937 BIRC5O15392 142 aa20.64■□□□□ 0.89
PTCHD3P2-201ENST00000424937 NADKO95544 446 aaPredicted RBP20.64■□□□□ 0.89
PTCHD3P2-201ENST00000424937 SERPINE1P05121 402 aa20.64■□□□□ 0.89
PTCHD3P2-201ENST00000424937 DHRS4L1P0CG22 281 aa20.64■□□□□ 0.89
PTCHD3P2-201ENST00000424937 ZNF24P17028 368 aa20.64■□□□□ 0.89
PTCHD3P2-201ENST00000424937 KCNK10P57789 538 aa20.64■□□□□ 0.89
PTCHD3P2-201ENST00000424937 RPL38P63173 70 aaKnown RBP20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms