RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 PCDHGA8Q9Y5G5 932 aa12.57□□□□□ -0.4
PRPF39-202ENST00000424478 PCSK5Q92824 1860 aa12.57□□□□□ -0.4
PRPF39-202ENST00000424478 SPENQ96T58 3664 aaKnown RBP12.57□□□□□ -0.4
PRPF39-202ENST00000424478 C9J4A7 227 aa12.57□□□□□ -0.4
PRPF39-202ENST00000424478 KCNH1O95259 989 aa12.57□□□□□ -0.4
PRPF39-202ENST00000424478 NUDT7P0C024 238 aa12.57□□□□□ -0.4
PRPF39-202ENST00000424478 ADSLP30566 484 aaPredicted RBP12.57□□□□□ -0.4
PRPF39-202ENST00000424478 SLC7A2P52569 658 aa12.57□□□□□ -0.4
PRPF39-202ENST00000424478 EMP2P54851 167 aa12.57□□□□□ -0.4
PRPF39-202ENST00000424478 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.57□□□□□ -0.4
PRPF39-202ENST00000424478 CYB5D1Q6P9G0 228 aa12.57□□□□□ -0.4
PRPF39-202ENST00000424478 NLGN4XQ8N0W4 816 aa12.57□□□□□ -0.4
PRPF39-202ENST00000424478 NLGN4YQ8NFZ3 816 aaPredicted RBP12.57□□□□□ -0.4
PRPF39-202ENST00000424478 OR5D16Q8NGK9 328 aa12.57□□□□□ -0.4
PRPF39-202ENST00000424478 MTERF3Q96E29 417 aa12.57□□□□□ -0.4
PRPF39-202ENST00000424478 ZBED6CLQ96FA7 236 aaPredicted RBP12.57□□□□□ -0.4
PRPF39-202ENST00000424478 RBM18Q96H35 190 aaKnown RBP12.57□□□□□ -0.4
PRPF39-202ENST00000424478 SLC35A5Q9BS91 424 aa12.57□□□□□ -0.4
PRPF39-202ENST00000424478 OR8D2Q9GZM6 311 aa12.57□□□□□ -0.4
PRPF39-202ENST00000424478 GIMAP4Q9NUV9 329 aa12.57□□□□□ -0.4
PRPF39-202ENST00000424478 TAS2R9Q9NYW1 312 aa12.57□□□□□ -0.4
PRPF39-202ENST00000424478 ADA2Q9NZK5 511 aa12.57□□□□□ -0.4
PRPF39-202ENST00000424478 ERVK-19Q9WJR5 959 aa12.57□□□□□ -0.4
PRPF39-202ENST00000424478 DTX4Q9Y2E6 619 aa12.57□□□□□ -0.4
PRPF39-202ENST00000424478 PCDHGA7Q9Y5G6 932 aa12.57□□□□□ -0.4
PRPF39-202ENST00000424478 CDRT15L2A8MXV6 281 aa12.56□□□□□ -0.4
PRPF39-202ENST00000424478 STMND1H3BQB6 276 aa12.56□□□□□ -0.4
PRPF39-202ENST00000424478 RNASET2O00584 256 aaKnown RBP12.56□□□□□ -0.4
PRPF39-202ENST00000424478 SLC22A2O15244 555 aa12.56□□□□□ -0.4
PRPF39-202ENST00000424478 KCNJ2P63252 427 aa12.56□□□□□ -0.4
PRPF39-202ENST00000424478 NANOGP8Q6NSW7 305 aa12.56□□□□□ -0.4
PRPF39-202ENST00000424478 C16orf47Q6ZP98 133 aaPredicted RBP12.56□□□□□ -0.4
PRPF39-202ENST00000424478 HMGN2P46Q86SG4 172 aa12.56□□□□□ -0.4
PRPF39-202ENST00000424478 NKD1Q969G9 470 aa12.56□□□□□ -0.4
PRPF39-202ENST00000424478 CCDC124Q96CT7 223 aaKnown RBP12.56□□□□□ -0.4
PRPF39-202ENST00000424478 FAM120BQ96EK7 910 aaKnown RBP12.56□□□□□ -0.4
PRPF39-202ENST00000424478 CCDC115Q96NT0 180 aa12.56□□□□□ -0.4
PRPF39-202ENST00000424478 DGAT2Q96PD7 388 aa12.56□□□□□ -0.4
PRPF39-202ENST00000424478 OR1F2PQ96R84 312 aa12.56□□□□□ -0.4
PRPF39-202ENST00000424478 THTPAQ9BU02 230 aa12.56□□□□□ -0.4
PRPF39-202ENST00000424478 NANOGQ9H9S0 305 aa12.56□□□□□ -0.4
PRPF39-202ENST00000424478 PRDM9Q9NQV7 894 aa12.56□□□□□ -0.4
PRPF39-202ENST00000424478 TAS2R7Q9NYW3 318 aa12.56□□□□□ -0.4
PRPF39-202ENST00000424478 MED13Q9UHV7 2174 aa12.56□□□□□ -0.4
PRPF39-202ENST00000424478 PCDHGB4Q9UN71 923 aa12.56□□□□□ -0.4
PRPF39-202ENST00000424478 RNF103-CHMP3A0A140T963 221 aa12.56□□□□□ -0.4
PRPF39-202ENST00000424478 C17orf105B2RV13 164 aa12.56□□□□□ -0.4
PRPF39-202ENST00000424478 GYG2O15488 501 aa12.56□□□□□ -0.4
PRPF39-202ENST00000424478 MPIP34949 423 aa12.56□□□□□ -0.4
PRPF39-202ENST00000424478 ID4P47928 161 aa12.56□□□□□ -0.4
PRPF39-202ENST00000424478 HSD17B7P56937 341 aa12.56□□□□□ -0.4
PRPF39-202ENST00000424478 PSME3P61289 254 aa12.56□□□□□ -0.4
PRPF39-202ENST00000424478 DUSP8Q13202 625 aa12.56□□□□□ -0.4
PRPF39-202ENST00000424478 IL10RAQ13651 578 aa12.56□□□□□ -0.4
PRPF39-202ENST00000424478 DPY19L1Q2PZI1 675 aa12.56□□□□□ -0.4
PRPF39-202ENST00000424478 TRMT5Q32P41 509 aaKnown RBP12.56□□□□□ -0.4
PRPF39-202ENST00000424478 TNFAIP8L2Q6P589 184 aaPredicted RBP12.56□□□□□ -0.4
PRPF39-202ENST00000424478 THAP3Q8WTV1 239 aaPredicted RBP12.56□□□□□ -0.4
PRPF39-202ENST00000424478 JADE3Q92613 823 aa12.56□□□□□ -0.4
PRPF39-202ENST00000424478 RAB8BQ92930 207 aa12.56□□□□□ -0.4
PRPF39-202ENST00000424478 RIT1Q92963 219 aa12.56□□□□□ -0.4
PRPF39-202ENST00000424478 CDRT15Q96T59 188 aa12.56□□□□□ -0.4
PRPF39-202ENST00000424478 CGREF1Q99674 301 aa12.56□□□□□ -0.4
PRPF39-202ENST00000424478 THUMPD3Q9BV44 507 aaKnown RBP12.56□□□□□ -0.4
PRPF39-202ENST00000424478 RMND5AQ9H871 391 aa12.56□□□□□ -0.4
PRPF39-202ENST00000424478 ZCCHC3Q9NUD5 404 aaKnown RBP12.56□□□□□ -0.4
PRPF39-202ENST00000424478 GPATCH2Q9NW75 528 aa12.56□□□□□ -0.4
PRPF39-202ENST00000424478 MAT2BQ9NZL9 334 aa12.56□□□□□ -0.4
PRPF39-202ENST00000424478 URB1O60287 2271 aaKnown RBP12.56□□□□□ -0.4
PRPF39-202ENST00000424478 IGLV3-12A0A075B6K2 115 aa12.55□□□□□ -0.4
PRPF39-202ENST00000424478 VSTM2BA6NLU5 285 aa12.55□□□□□ -0.4
PRPF39-202ENST00000424478 SLC6A2P23975 617 aa12.55□□□□□ -0.4
PRPF39-202ENST00000424478 SFT2D3Q587I9 215 aa12.55□□□□□ -0.4
PRPF39-202ENST00000424478 RNF130Q86XS8 419 aa12.55□□□□□ -0.4
PRPF39-202ENST00000424478 VPS37AQ8NEZ2 397 aa12.55□□□□□ -0.4
PRPF39-202ENST00000424478 PTPMT1Q8WUK0 201 aaPredicted RBP12.55□□□□□ -0.4
PRPF39-202ENST00000424478 MAL2Q969L2 176 aa12.55□□□□□ -0.4
PRPF39-202ENST00000424478 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.55□□□□□ -0.4
PRPF39-202ENST00000424478 CMTM6Q9NX76 183 aa12.55□□□□□ -0.4
PRPF39-202ENST00000424478 IGKV3D-11A0A0A0MRZ8 115 aa12.55□□□□□ -0.4
PRPF39-202ENST00000424478 UPK1AO00322 258 aa12.55□□□□□ -0.4
PRPF39-202ENST00000424478 WT1P19544 449 aaPredicted RBP12.55□□□□□ -0.4
PRPF39-202ENST00000424478 PRDX6P30041 224 aa12.55□□□□□ -0.4
PRPF39-202ENST00000424478 CHI3L1P36222 383 aaPredicted RBP12.55□□□□□ -0.4
PRPF39-202ENST00000424478 RPL3P39023 403 aaKnown RBP12.55□□□□□ -0.4
PRPF39-202ENST00000424478 FRKP42685 505 aaPredicted RBP12.55□□□□□ -0.4
PRPF39-202ENST00000424478 MGAT2Q10469 447 aa12.55□□□□□ -0.4
PRPF39-202ENST00000424478 LASP1Q14847 261 aaKnown RBP12.55□□□□□ -0.4
PRPF39-202ENST00000424478 PRICKLE4Q2TBC4 344 aa12.55□□□□□ -0.4
PRPF39-202ENST00000424478 ANXA8L1Q5VT79 327 aa12.55□□□□□ -0.4
PRPF39-202ENST00000424478 SLC44A2Q8IWA5 706 aaPredicted RBP12.55□□□□□ -0.4
PRPF39-202ENST00000424478 STARD8Q92502 1023 aa12.55□□□□□ -0.4
PRPF39-202ENST00000424478 ELP4Q96EB1 424 aa12.55□□□□□ -0.4
PRPF39-202ENST00000424478 ZPBPQ9BS86 351 aa12.55□□□□□ -0.4
PRPF39-202ENST00000424478 CADM1Q9BY67 442 aaKnown RBP12.55□□□□□ -0.4
PRPF39-202ENST00000424478 NRSN2Q9GZP1 204 aa12.55□□□□□ -0.4
PRPF39-202ENST00000424478 SERHL2Q9H4I8 314 aa12.55□□□□□ -0.4
PRPF39-202ENST00000424478 BCAP29Q9UHQ4 241 aa12.55□□□□□ -0.4
PRPF39-202ENST00000424478 CACNA1GO43497 2377 aa12.55□□□□□ -0.4
PRPF39-202ENST00000424478 NME4O00746 187 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms