RNA–Protein interactions for RNA: ENST00000421756.5

MCF2L-213, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-213ENST00000421756 UQCRC2P22695 453 aa12.63□□□□□ -0.39
MCF2L-213ENST00000421756 BSGP35613 385 aa12.63□□□□□ -0.39
MCF2L-213ENST00000421756 ZNF404Q494X3 552 aa12.63□□□□□ -0.39
MCF2L-213ENST00000421756 CRB2Q5IJ48 1285 aa12.63□□□□□ -0.39
MCF2L-213ENST00000421756 TJAP1Q5JTD0 557 aa12.63□□□□□ -0.39
MCF2L-213ENST00000421756 TPRG1LQ5T0D9 272 aa12.63□□□□□ -0.39
MCF2L-213ENST00000421756 SLC35F1Q5T1Q4 408 aa12.63□□□□□ -0.39
MCF2L-213ENST00000421756 LHFPL3Q86UP9 236 aa12.63□□□□□ -0.39
MCF2L-213ENST00000421756 OR52E1Q8NGJ3 308 aa12.63□□□□□ -0.39
MCF2L-213ENST00000421756 YIPF6Q96EC8 236 aa12.63□□□□□ -0.39
MCF2L-213ENST00000421756 POLR2J2Q9GZM3 115 aaKnown RBP12.63□□□□□ -0.39
MCF2L-213ENST00000421756 SERHL2Q9H4I8 314 aa12.63□□□□□ -0.39
MCF2L-213ENST00000421756 MYNNQ9NPC7 610 aa12.63□□□□□ -0.39
MCF2L-213ENST00000421756 PADI2Q9Y2J8 665 aa12.63□□□□□ -0.39
MCF2L-213ENST00000421756 IFT52Q9Y366 437 aa12.63□□□□□ -0.39
MCF2L-213ENST00000421756 WDFY4Q6ZS81 3184 aa12.63□□□□□ -0.39
MCF2L-213ENST00000421756 PRAMEF27A3QJZ7 478 aa12.63□□□□□ -0.39
MCF2L-213ENST00000421756 EFCAB14O75071 495 aa12.63□□□□□ -0.39
MCF2L-213ENST00000421756 ADAM23O75077 832 aa12.63□□□□□ -0.39
MCF2L-213ENST00000421756 SNX4O95219 450 aa12.63□□□□□ -0.39
MCF2L-213ENST00000421756 RASGRP1O95267 797 aa12.63□□□□□ -0.39
MCF2L-213ENST00000421756 DDX6P26196 483 aaKnown RBP eCLIP12.63□□□□□ -0.39
MCF2L-213ENST00000421756 TGFBR2P37173 567 aa12.63□□□□□ -0.39
MCF2L-213ENST00000421756 BCL6P41182 706 aa12.63□□□□□ -0.39
MCF2L-213ENST00000421756 HTRA4P83105 476 aaPredicted RBP12.63□□□□□ -0.39
MCF2L-213ENST00000421756 IL18R1Q13478 541 aa12.63□□□□□ -0.39
MCF2L-213ENST00000421756 TOR1AIP1Q5JTV8 583 aa12.63□□□□□ -0.39
MCF2L-213ENST00000421756 SYT6Q5T7P8 510 aaPredicted RBP12.63□□□□□ -0.39
MCF2L-213ENST00000421756 ETFBKMTQ8IXQ9 262 aa12.63□□□□□ -0.39
MCF2L-213ENST00000421756 OR5K2Q8NHB8 316 aa12.63□□□□□ -0.39
MCF2L-213ENST00000421756 DYNC2LI1Q8TCX1 351 aa12.63□□□□□ -0.39
MCF2L-213ENST00000421756 SMAP2Q8WU79 429 aaPredicted RBP12.63□□□□□ -0.39
MCF2L-213ENST00000421756 RGMAQ96B86 450 aa12.63□□□□□ -0.39
MCF2L-213ENST00000421756 MS4A8Q9BY19 250 aa12.63□□□□□ -0.39
MCF2L-213ENST00000421756 ADAP2Q9NPF8 381 aa12.63□□□□□ -0.39
MCF2L-213ENST00000421756 FAM183AA6NL82 134 aa12.63□□□□□ -0.39
MCF2L-213ENST00000421756 KIAA0355O15063 1070 aa12.63□□□□□ -0.39
MCF2L-213ENST00000421756 GMFGO60234 142 aa12.63□□□□□ -0.39
MCF2L-213ENST00000421756 FCMRO60667 390 aa12.63□□□□□ -0.39
MCF2L-213ENST00000421756 CDC123O75794 336 aaPredicted RBP12.63□□□□□ -0.39
MCF2L-213ENST00000421756 CDK1P06493 297 aa12.63□□□□□ -0.39
MCF2L-213ENST00000421756 ARAFP10398 606 aa12.63□□□□□ -0.39
MCF2L-213ENST00000421756 LBX1P52954 281 aa12.63□□□□□ -0.39
MCF2L-213ENST00000421756 CSNK1G2P78368 415 aa12.63□□□□□ -0.39
MCF2L-213ENST00000421756 ZC3H12BQ5HYM0 836 aaKnown RBP12.63□□□□□ -0.39
MCF2L-213ENST00000421756 PIP5KL1Q5T9C9 394 aa12.63□□□□□ -0.39
MCF2L-213ENST00000421756 FCRLBQ6BAA4 426 aa12.63□□□□□ -0.39
MCF2L-213ENST00000421756 KIAA1161Q6NSJ0 714 aa12.63□□□□□ -0.39
MCF2L-213ENST00000421756 PODNL1Q6PEZ8 512 aa12.63□□□□□ -0.39
MCF2L-213ENST00000421756 LAS2Q8IYD9 372 aa12.63□□□□□ -0.39
MCF2L-213ENST00000421756 NLGN4YQ8NFZ3 816 aaPredicted RBP12.63□□□□□ -0.39
MCF2L-213ENST00000421756 CRISPLD2Q9H0B8 497 aa12.63□□□□□ -0.39
MCF2L-213ENST00000421756 TIGARQ9NQ88 270 aa12.63□□□□□ -0.39
MCF2L-213ENST00000421756 SDHBP21912 280 aa12.62□□□□□ -0.39
MCF2L-213ENST00000421756 SERPINB1P30740 379 aa12.62□□□□□ -0.39
MCF2L-213ENST00000421756 ACTR1BP42025 376 aa12.62□□□□□ -0.39
MCF2L-213ENST00000421756 GPR4P46093 362 aa12.62□□□□□ -0.39
MCF2L-213ENST00000421756 XCR1P46094 333 aa12.62□□□□□ -0.39
MCF2L-213ENST00000421756 MAN2A2P49641 1150 aa12.62□□□□□ -0.39
MCF2L-213ENST00000421756 UGT2B15P54855 530 aa12.62□□□□□ -0.39
MCF2L-213ENST00000421756 ACTR1AP61163 376 aa12.62□□□□□ -0.39
MCF2L-213ENST00000421756 GPR68Q15743 365 aa12.62□□□□□ -0.39
MCF2L-213ENST00000421756 FAM92BQ6ZTR7 304 aa12.62□□□□□ -0.39
MCF2L-213ENST00000421756 LRRC56Q8IYG6 542 aaPredicted RBP12.62□□□□□ -0.39
MCF2L-213ENST00000421756 CADM3Q8N126 398 aa12.62□□□□□ -0.39
MCF2L-213ENST00000421756 CHCHD4Q8N4Q1 142 aa12.62□□□□□ -0.39
MCF2L-213ENST00000421756 DEFB119Q8N690 84 aa12.62□□□□□ -0.39
MCF2L-213ENST00000421756 OR6Q1Q8NGQ2 317 aa12.62□□□□□ -0.39
MCF2L-213ENST00000421756 ZFPM2Q8WW38 1151 aa12.62□□□□□ -0.39
MCF2L-213ENST00000421756 UBE2E3Q969T4 207 aa12.62□□□□□ -0.39
MCF2L-213ENST00000421756 ZBED6CLQ96FA7 236 aaPredicted RBP12.62□□□□□ -0.39
MCF2L-213ENST00000421756 CAMK1GQ96NX5 476 aa12.62□□□□□ -0.39
MCF2L-213ENST00000421756 PBX4Q9BYU1 374 aa12.62□□□□□ -0.39
MCF2L-213ENST00000421756 UCK2Q9BZX2 261 aa12.62□□□□□ -0.39
MCF2L-213ENST00000421756 CCNB1IP1Q9NPC3 277 aa12.62□□□□□ -0.39
MCF2L-213ENST00000421756 LHX9Q9NQ69 397 aa12.62□□□□□ -0.39
MCF2L-213ENST00000421756 DENND4CQ5VZ89 1909 aa12.62□□□□□ -0.39
MCF2L-213ENST00000421756 CBFA2T3O75081 653 aa12.62□□□□□ -0.39
MCF2L-213ENST00000421756 CLEC2LP0C7M8 214 aa12.62□□□□□ -0.39
MCF2L-213ENST00000421756 SPNP16150 400 aa12.62□□□□□ -0.39
MCF2L-213ENST00000421756 TMED10P49755 219 aaKnown RBP12.62□□□□□ -0.39
MCF2L-213ENST00000421756 RGS6P49758 472 aa12.62□□□□□ -0.39
MCF2L-213ENST00000421756 INSL4Q14641 139 aa12.62□□□□□ -0.39
MCF2L-213ENST00000421756 GINS1Q14691 196 aa12.62□□□□□ -0.39
MCF2L-213ENST00000421756 NNATQ16517 81 aa12.62□□□□□ -0.39
MCF2L-213ENST00000421756 ZMAT1Q5H9K5 638 aa12.62□□□□□ -0.39
MCF2L-213ENST00000421756 OR4C11Q6IEV9 310 aa12.62□□□□□ -0.39
MCF2L-213ENST00000421756 LCN9Q8WX39 176 aa12.62□□□□□ -0.39
MCF2L-213ENST00000421756 GATAD2BQ8WXI9 593 aa12.62□□□□□ -0.39
MCF2L-213ENST00000421756 LRIG1Q96JA1 1093 aa12.62□□□□□ -0.39
MCF2L-213ENST00000421756 GPA33Q99795 319 aa12.62□□□□□ -0.39
MCF2L-213ENST00000421756 SLIRPQ9GZT3 109 aaKnown RBP12.62□□□□□ -0.39
MCF2L-213ENST00000421756 CLCA2Q9UQC9 943 aa12.62□□□□□ -0.39
MCF2L-213ENST00000421756 IGKV1-8A0A0C4DH67 115 aa12.61□□□□□ -0.39
MCF2L-213ENST00000421756 RPLP0P05388 317 aaKnown RBP12.61□□□□□ -0.39
MCF2L-213ENST00000421756 ASGR2P07307 311 aa12.61□□□□□ -0.39
MCF2L-213ENST00000421756 ZNF12P17014 697 aa12.61□□□□□ -0.39
MCF2L-213ENST00000421756 PPP2R1BP30154 601 aa12.61□□□□□ -0.39
MCF2L-213ENST00000421756 EPHA5P54756 1037 aa12.61□□□□□ -0.39
MCF2L-213ENST00000421756 TAS2R41P59536 307 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms