RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 IRF8Q02556 426 aa6.49□□□□□ -1.37
HMGN1-205ENST00000419378 CHIT1Q13231 466 aa6.49□□□□□ -1.37
HMGN1-205ENST00000419378 E2F2Q14209 437 aa6.49□□□□□ -1.37
HMGN1-205ENST00000419378 ZNF267Q14586 743 aaPredicted RBP6.49□□□□□ -1.37
HMGN1-205ENST00000419378 TBCCQ15814 346 aa6.49□□□□□ -1.37
HMGN1-205ENST00000419378 IGFBP7Q16270 282 aa6.49□□□□□ -1.37
HMGN1-205ENST00000419378 GFOD2Q3B7J2 385 aa6.49□□□□□ -1.37
HMGN1-205ENST00000419378 ADPRMQ3LIE5 342 aa6.49□□□□□ -1.37
HMGN1-205ENST00000419378 FAM153CQ494X1 144 aa6.49□□□□□ -1.37
HMGN1-205ENST00000419378 PRR30Q53SZ7 412 aaPredicted RBP6.49□□□□□ -1.37
HMGN1-205ENST00000419378 TECRLQ5HYJ1 363 aa6.49□□□□□ -1.37
HMGN1-205ENST00000419378 PAGE2BQ5JRK9 111 aa6.49□□□□□ -1.37
HMGN1-205ENST00000419378 AGAP7PQ5VUJ5 663 aa6.49□□□□□ -1.37
HMGN1-205ENST00000419378 KLC3Q6P597 504 aa6.49□□□□□ -1.37
HMGN1-205ENST00000419378 IGFL2Q6UWQ7 119 aa6.49□□□□□ -1.37
HMGN1-205ENST00000419378 IGFL3Q6UXB1 125 aa6.49□□□□□ -1.37
HMGN1-205ENST00000419378 LANCL3Q6ZV70 420 aa6.49□□□□□ -1.37
HMGN1-205ENST00000419378 TRMT10CQ7L0Y3 403 aaKnown RBP6.49□□□□□ -1.37
HMGN1-205ENST00000419378 KRTAP1-3Q8IUG1 177 aa6.49□□□□□ -1.37
HMGN1-205ENST00000419378 KBTBD2Q8IY47 623 aa6.49□□□□□ -1.37
HMGN1-205ENST00000419378 CA13Q8N1Q1 262 aa6.49□□□□□ -1.37
HMGN1-205ENST00000419378 AMER2Q8N7J2 671 aa6.49□□□□□ -1.37
HMGN1-205ENST00000419378 BRIX1Q8TDN6 353 aaKnown RBP6.49□□□□□ -1.37
HMGN1-205ENST00000419378 CCT6BQ92526 530 aa6.49□□□□□ -1.37
HMGN1-205ENST00000419378 MIB2Q96AX9 1013 aa6.49□□□□□ -1.37
HMGN1-205ENST00000419378 MS4A6EQ96DS6 147 aa6.49□□□□□ -1.37
HMGN1-205ENST00000419378 SMIM10Q96HG1 83 aa6.49□□□□□ -1.37
HMGN1-205ENST00000419378 LCORQ96JN0 433 aaPredicted RBP6.49□□□□□ -1.37
HMGN1-205ENST00000419378 AGAP4Q96P64 663 aa6.49□□□□□ -1.37
HMGN1-205ENST00000419378 WDR77Q9BQA1 342 aaPredicted RBP6.49□□□□□ -1.37
HMGN1-205ENST00000419378 TUBB6Q9BUF5 446 aa6.49□□□□□ -1.37
HMGN1-205ENST00000419378 CLK4Q9HAZ1 481 aaKnown RBP6.49□□□□□ -1.37
HMGN1-205ENST00000419378 XPR1Q9UBH6 696 aa6.49□□□□□ -1.37
HMGN1-205ENST00000419378 C19orf25Q9UFG5 118 aaPredicted RBP6.49□□□□□ -1.37
HMGN1-205ENST00000419378 ZNF490Q9ULM2 529 aaPredicted RBP6.49□□□□□ -1.37
HMGN1-205ENST00000419378 CSAG2Q9Y5P2 127 aa6.49□□□□□ -1.37
HMGN1-205ENST00000419378 FLNBO75369 2602 aaKnown RBP6.49□□□□□ -1.37
HMGN1-205ENST00000419378 CNTRLQ7Z7A1 2325 aa6.49□□□□□ -1.37
HMGN1-205ENST00000419378 IGHV3-20A0A0C4DH32 117 aa6.48□□□□□ -1.37
HMGN1-205ENST00000419378 A0A0G2JN53 185 aa6.48□□□□□ -1.37
HMGN1-205ENST00000419378 LRIT2A6NDA9 550 aa6.48□□□□□ -1.37
HMGN1-205ENST00000419378 ANKDD1BA6NHY2 528 aa6.48□□□□□ -1.37
HMGN1-205ENST00000419378 C9orf118A6NHY6 69 aa6.48□□□□□ -1.37
HMGN1-205ENST00000419378 MAGEB17A8MXT2 336 aa6.48□□□□□ -1.37
HMGN1-205ENST00000419378 TRIM49D1C9J1S8 452 aa6.48□□□□□ -1.37
HMGN1-205ENST00000419378 ERI3O43414 337 aaKnown RBP6.48□□□□□ -1.37
HMGN1-205ENST00000419378 B4GALT2O60909 372 aa6.48□□□□□ -1.37
HMGN1-205ENST00000419378 SIX3O95343 332 aaPredicted RBP6.48□□□□□ -1.37
HMGN1-205ENST00000419378 RNH1P13489 461 aaKnown RBP6.48□□□□□ -1.37
HMGN1-205ENST00000419378 JAK1P23458 1154 aa6.48□□□□□ -1.37
HMGN1-205ENST00000419378 GCAP28676 217 aa6.48□□□□□ -1.37
HMGN1-205ENST00000419378 ADSLP30566 484 aaPredicted RBP6.48□□□□□ -1.37
HMGN1-205ENST00000419378 CASP2P42575 452 aa6.48□□□□□ -1.37
HMGN1-205ENST00000419378 PLA2G16P53816 162 aa6.48□□□□□ -1.37
HMGN1-205ENST00000419378 ALDH18A1P54886 795 aaKnown RBP6.48□□□□□ -1.37
HMGN1-205ENST00000419378 BTN3A2P78410 334 aa6.48□□□□□ -1.37
HMGN1-205ENST00000419378 MFAP5Q13361 173 aa6.48□□□□□ -1.37
HMGN1-205ENST00000419378 ABRAXAS2Q15018 415 aa6.48□□□□□ -1.37
HMGN1-205ENST00000419378 NSDHLQ15738 373 aa6.48□□□□□ -1.37
HMGN1-205ENST00000419378 HIST2H2ACQ16777 129 aaPredicted RBP6.48□□□□□ -1.37
HMGN1-205ENST00000419378 PFKFB4Q16877 469 aa6.48□□□□□ -1.37
HMGN1-205ENST00000419378 C3orf36Q3SXR2 165 aa6.48□□□□□ -1.37
HMGN1-205ENST00000419378 CRB2Q5IJ48 1285 aa6.48□□□□□ -1.37
HMGN1-205ENST00000419378 TEX35Q5T0J7 233 aa6.48□□□□□ -1.37
HMGN1-205ENST00000419378 PLAG1Q6DJT9 500 aa6.48□□□□□ -1.37
HMGN1-205ENST00000419378 HIST2H2AA3Q6FI13 130 aa6.48□□□□□ -1.37
HMGN1-205ENST00000419378 GRHL2Q6ISB3 625 aa6.48□□□□□ -1.37
HMGN1-205ENST00000419378 PAPD4Q6PIY7 484 aaKnown RBP6.48□□□□□ -1.37
HMGN1-205ENST00000419378 ISLR2Q6UXK2 745 aa6.48□□□□□ -1.37
HMGN1-205ENST00000419378 QSOX2Q6ZRP7 698 aa6.48□□□□□ -1.37
HMGN1-205ENST00000419378 LINC00696Q6ZRV3 163 aa6.48□□□□□ -1.37
HMGN1-205ENST00000419378 Q6ZS92 163 aa6.48□□□□□ -1.37
HMGN1-205ENST00000419378 GOLGA7Q7Z5G4 137 aa6.48□□□□□ -1.37
HMGN1-205ENST00000419378 CPEB2Q7Z5Q1 589 aaKnown RBP6.48□□□□□ -1.37
HMGN1-205ENST00000419378 ANKRD37Q7Z713 158 aa6.48□□□□□ -1.37
HMGN1-205ENST00000419378 ZADH2Q8N4Q0 377 aa6.48□□□□□ -1.37
HMGN1-205ENST00000419378 SIRT6Q8N6T7 355 aa6.48□□□□□ -1.37
HMGN1-205ENST00000419378 TEX9Q8N6V9 391 aa6.48□□□□□ -1.37
HMGN1-205ENST00000419378 PTGR2Q8N8N7 351 aaPredicted RBP6.48□□□□□ -1.37
HMGN1-205ENST00000419378 PLPP5Q8NEB5 264 aa6.48□□□□□ -1.37
HMGN1-205ENST00000419378 OR2L5Q8NG80 312 aa6.48□□□□□ -1.37
HMGN1-205ENST00000419378 CPT1CQ8TCG5 803 aa6.48□□□□□ -1.37
HMGN1-205ENST00000419378 PPP4R1Q8TF05 950 aa6.48□□□□□ -1.37
HMGN1-205ENST00000419378 PSMF1Q92530 271 aa6.48□□□□□ -1.37
HMGN1-205ENST00000419378 TSLPQ969D9 159 aa6.48□□□□□ -1.37
HMGN1-205ENST00000419378 RELTQ969Z4 430 aa6.48□□□□□ -1.37
HMGN1-205ENST00000419378 MBD6Q96DN6 1003 aa6.48□□□□□ -1.37
HMGN1-205ENST00000419378 FAR2Q96K12 515 aa6.48□□□□□ -1.37
HMGN1-205ENST00000419378 IMMP1LQ96LU5 166 aa6.48□□□□□ -1.37
HMGN1-205ENST00000419378 QRFPRQ96P65 431 aa6.48□□□□□ -1.37
HMGN1-205ENST00000419378 TXLNGYQ9BZA5 131 aa6.48□□□□□ -1.37
HMGN1-205ENST00000419378 REXO4Q9GZR2 422 aaKnown RBP6.48□□□□□ -1.37
HMGN1-205ENST00000419378 ILKAPQ9H0C8 392 aaPredicted RBP6.48□□□□□ -1.37
HMGN1-205ENST00000419378 RHBGQ9H310 441 aa6.48□□□□□ -1.37
HMGN1-205ENST00000419378 CLMPQ9H6B4 373 aa6.48□□□□□ -1.37
HMGN1-205ENST00000419378 EPS8L2Q9H6S3 715 aa6.48□□□□□ -1.37
HMGN1-205ENST00000419378 SLAMF7Q9NQ25 335 aa6.48□□□□□ -1.37
HMGN1-205ENST00000419378 PTGFRNQ9P2B2 879 aa6.48□□□□□ -1.37
HMGN1-205ENST00000419378 CPSF2Q9P2I0 782 aaKnown RBP6.48□□□□□ -1.37
HMGN1-205ENST00000419378 B3GNT3Q9Y2A9 372 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms