RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 SLAMF1Q13291 335 aa16.68■□□□□ 0.26
VCP-202ENST00000417448 MAPKAPK3Q16644 382 aa16.68■□□□□ 0.26
VCP-202ENST00000417448 TMEM35AQ53FP2 167 aa16.68■□□□□ 0.26
VCP-202ENST00000417448 TMEM198Q66K66 360 aa16.68■□□□□ 0.26
VCP-202ENST00000417448 CLNKQ7Z7G1 428 aa16.68■□□□□ 0.26
VCP-202ENST00000417448 CROCCP2Q86T23 111 aa16.68■□□□□ 0.26
VCP-202ENST00000417448 ZNF227Q86WZ6 799 aa16.68■□□□□ 0.26
VCP-202ENST00000417448 AGR3Q8TD06 166 aa16.68■□□□□ 0.26
VCP-202ENST00000417448 TLCD1Q96CP7 247 aa16.68■□□□□ 0.26
VCP-202ENST00000417448 ALPK1Q96QP1 1244 aa16.68■□□□□ 0.26
VCP-202ENST00000417448 ZNF717Q9BY31 904 aaPredicted RBP16.68■□□□□ 0.26
VCP-202ENST00000417448 NECTIN3Q9NQS3 549 aa16.68■□□□□ 0.26
VCP-202ENST00000417448 ARGLU1Q9NWB6 273 aaPredicted RBP16.68■□□□□ 0.26
VCP-202ENST00000417448 KCMF1Q9P0J7 381 aa16.68■□□□□ 0.26
VCP-202ENST00000417448 SNX6Q9UNH7 406 aa16.68■□□□□ 0.26
VCP-202ENST00000417448 L3MBTL1Q9Y468 752 aa16.68■□□□□ 0.26
VCP-202ENST00000417448 PTGDR2Q9Y5Y4 395 aa16.68■□□□□ 0.26
VCP-202ENST00000417448 GOLGA6L10A6NI86 522 aa16.67■□□□□ 0.26
VCP-202ENST00000417448 TMEM233B4DJY2 109 aa16.67■□□□□ 0.26
VCP-202ENST00000417448 TGFBR3LH3BV60 316 aa16.67■□□□□ 0.26
VCP-202ENST00000417448 PSMD12O00232 456 aaPredicted RBP16.67■□□□□ 0.26
VCP-202ENST00000417448 TMPRSS11DO60235 418 aa16.67■□□□□ 0.26
VCP-202ENST00000417448 NME2P1O60361 137 aa16.67■□□□□ 0.26
VCP-202ENST00000417448 LYPLA1O75608 230 aaPredicted RBP16.67■□□□□ 0.26
VCP-202ENST00000417448 SASH3O75995 380 aa16.67■□□□□ 0.26
VCP-202ENST00000417448 NME2P22392 152 aa16.67■□□□□ 0.26
VCP-202ENST00000417448 HIST1H1TP22492 207 aaPredicted RBP16.67■□□□□ 0.26
VCP-202ENST00000417448 HNRNPH2P55795 449 aaKnown RBP16.67■□□□□ 0.26
VCP-202ENST00000417448 DLX5P56178 289 aa16.67■□□□□ 0.26
VCP-202ENST00000417448 RAB38P57729 211 aa16.67■□□□□ 0.26
VCP-202ENST00000417448 SKP1P63208 163 aa16.67■□□□□ 0.26
VCP-202ENST00000417448 HMGCS1Q01581 520 aa16.67■□□□□ 0.26
VCP-202ENST00000417448 ID2Q02363 134 aa16.67■□□□□ 0.26
VCP-202ENST00000417448 HDXQ7Z353 690 aa16.67■□□□□ 0.26
VCP-202ENST00000417448 ANKRD37Q7Z713 158 aa16.67■□□□□ 0.26
VCP-202ENST00000417448 NUDCD3Q8IVD9 361 aa16.67■□□□□ 0.26
VCP-202ENST00000417448 WFDC11Q8NEX6 87 aa16.67■□□□□ 0.26
VCP-202ENST00000417448 METTL21AQ8WXB1 218 aa16.67■□□□□ 0.26
VCP-202ENST00000417448 RND1Q92730 232 aa16.67■□□□□ 0.26
VCP-202ENST00000417448 ARSGQ96EG1 525 aa16.67■□□□□ 0.26
VCP-202ENST00000417448 PTCHD1Q96NR3 888 aa16.67■□□□□ 0.26
VCP-202ENST00000417448 SERPINI1Q99574 410 aa16.67■□□□□ 0.26
VCP-202ENST00000417448 GPATCH1Q9BRR8 931 aaKnown RBP16.67■□□□□ 0.26
VCP-202ENST00000417448 POLDIP3Q9BY77 421 aaKnown RBP16.67■□□□□ 0.26
VCP-202ENST00000417448 LRFN1Q9P244 771 aa16.67■□□□□ 0.26
VCP-202ENST00000417448 DAPP1Q9UN19 280 aa16.67■□□□□ 0.26
VCP-202ENST00000417448 TMEM120BA0PK00 339 aa16.66■□□□□ 0.26
VCP-202ENST00000417448 ITM2AO43736 263 aa16.66■□□□□ 0.26
VCP-202ENST00000417448 PRMT3O60678 531 aa16.66■□□□□ 0.26
VCP-202ENST00000417448 ULK1O75385 1050 aa16.66■□□□□ 0.26
VCP-202ENST00000417448 CRCPO75575 148 aa16.66■□□□□ 0.26
VCP-202ENST00000417448 SLC25A12O75746 678 aa16.66■□□□□ 0.26
VCP-202ENST00000417448 KRT6AP02538 564 aa16.66■□□□□ 0.26
VCP-202ENST00000417448 KRT6BP04259 564 aa16.66■□□□□ 0.26
VCP-202ENST00000417448 KLK1P06870 262 aa16.66■□□□□ 0.26
VCP-202ENST00000417448 PPP2R1BP30154 601 aa16.66■□□□□ 0.26
VCP-202ENST00000417448 KRT6CP48668 564 aa16.66■□□□□ 0.26
VCP-202ENST00000417448 NR0B1P51843 470 aaKnown RBP16.66■□□□□ 0.26
VCP-202ENST00000417448 WDR4P57081 412 aaKnown RBP16.66■□□□□ 0.26
VCP-202ENST00000417448 CUL3Q13618 768 aa16.66■□□□□ 0.26
VCP-202ENST00000417448 NSDHLQ15738 373 aa16.66■□□□□ 0.26
VCP-202ENST00000417448 CHI3L2Q15782 390 aa16.66■□□□□ 0.26
VCP-202ENST00000417448 TTMPQ5BVD1 217 aa16.66■□□□□ 0.26
VCP-202ENST00000417448 ARL13AQ5H913 290 aaPredicted RBP16.66■□□□□ 0.26
VCP-202ENST00000417448 EMC4Q5J8M3 183 aa16.66■□□□□ 0.26
VCP-202ENST00000417448 C18orf63Q68DL7 685 aa16.66■□□□□ 0.26
VCP-202ENST00000417448 TMEM211Q6ICI0 200 aa16.66■□□□□ 0.26
VCP-202ENST00000417448 OR4N5Q8IXE1 308 aa16.66■□□□□ 0.26
VCP-202ENST00000417448 SRFBP1Q8NEF9 429 aaKnown RBP16.66■□□□□ 0.26
VCP-202ENST00000417448 NPLQ9BXD5 320 aaPredicted RBP16.66■□□□□ 0.26
VCP-202ENST00000417448 ACPTQ9BZG2 426 aa16.66■□□□□ 0.26
VCP-202ENST00000417448 SSU72Q9NP77 194 aaKnown RBP16.66■□□□□ 0.26
VCP-202ENST00000417448 MMP25Q9NPA2 562 aa16.66■□□□□ 0.26
VCP-202ENST00000417448 ATG4BQ9Y4P1 393 aa16.66■□□□□ 0.26
VCP-202ENST00000417448 ACTL7BQ9Y614 415 aa16.66■□□□□ 0.26
VCP-202ENST00000417448 A0A088AWK7 358 aa16.65■□□□□ 0.26
VCP-202ENST00000417448 GLOD5A6NK44 160 aa16.65■□□□□ 0.26
VCP-202ENST00000417448 CYR61O00622 381 aa16.65■□□□□ 0.26
VCP-202ENST00000417448 ENO1P06733 434 aaKnown RBP16.65■□□□□ 0.26
VCP-202ENST00000417448 ZNF10P21506 573 aaPredicted RBP16.65■□□□□ 0.26
VCP-202ENST00000417448 BGNP21810 368 aa16.65■□□□□ 0.26
VCP-202ENST00000417448 CPN2P22792 545 aa16.65■□□□□ 0.26
VCP-202ENST00000417448 DNASE1P24855 282 aa16.65■□□□□ 0.26
VCP-202ENST00000417448 HPDP32754 393 aaPredicted RBP16.65■□□□□ 0.26
VCP-202ENST00000417448 RFC3P40938 356 aa16.65■□□□□ 0.26
VCP-202ENST00000417448 MEOX1P50221 254 aa16.65■□□□□ 0.26
VCP-202ENST00000417448 NUP107P57740 925 aa16.65■□□□□ 0.26
VCP-202ENST00000417448 PMPCAQ10713 525 aa16.65■□□□□ 0.26
VCP-202ENST00000417448 SFT2D3Q587I9 215 aa16.65■□□□□ 0.26
VCP-202ENST00000417448 NIPAL1Q6NVV3 410 aa16.65■□□□□ 0.26
VCP-202ENST00000417448 ZZZ3Q8IYH5 903 aa16.65■□□□□ 0.26
VCP-202ENST00000417448 C1orf52Q8N6N3 182 aaKnown RBP16.65■□□□□ 0.26
VCP-202ENST00000417448 PPP1R14CQ8TAE6 165 aa16.65■□□□□ 0.26
VCP-202ENST00000417448 M1APQ8TC57 530 aa16.65■□□□□ 0.26
VCP-202ENST00000417448 DOK4Q8TEW6 326 aa16.65■□□□□ 0.26
VCP-202ENST00000417448 OR1F2PQ96R84 312 aa16.65■□□□□ 0.26
VCP-202ENST00000417448 CENPKQ9BS16 269 aa16.65■□□□□ 0.26
VCP-202ENST00000417448 PRTFDC1Q9NRG1 225 aa16.65■□□□□ 0.26
VCP-202ENST00000417448 ATRQ13535 2644 aa16.65■□□□□ 0.26
VCP-202ENST00000417448 UQCRHLA0A096LP55 91 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms