RNA–Protein interactions for RNA: ENST00000416688.5

CTDSPL-203, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-203ENST00000416688 PHF11Q9UIL8 331 aa2.93□□□□□ -1.94
CTDSPL-203ENST00000416688 NOCTQ9UK39 431 aaKnown RBP2.93□□□□□ -1.94
CTDSPL-203ENST00000416688 ADAM21Q9UKJ8 722 aa2.93□□□□□ -1.94
CTDSPL-203ENST00000416688 ZDHHC9Q9Y397 364 aa2.93□□□□□ -1.94
CTDSPL-203ENST00000416688 HYOU1Q9Y4L1 999 aa2.93□□□□□ -1.94
CTDSPL-203ENST00000416688 TNFRSF18Q9Y5U5 241 aa2.93□□□□□ -1.94
CTDSPL-203ENST00000416688 OAS3Q9Y6K5 1087 aaKnown RBP2.93□□□□□ -1.94
CTDSPL-203ENST00000416688 NACADO15069 1562 aa2.92□□□□□ -1.94
CTDSPL-203ENST00000416688 PNPLA6Q8IY17 1366 aa2.92□□□□□ -1.94
CTDSPL-203ENST00000416688 TRAV24A0A0B4J272 114 aa2.92□□□□□ -1.94
CTDSPL-203ENST00000416688 A0A1B0GTI1 187 aa2.92□□□□□ -1.94
CTDSPL-203ENST00000416688 LOC105371267A0A1B0GV96 52 aa2.92□□□□□ -1.94
CTDSPL-203ENST00000416688 C11orf97A0A1B0GVM6 126 aaPredicted RBP2.92□□□□□ -1.94
CTDSPL-203ENST00000416688 A0A1B0GW15 77 aa2.92□□□□□ -1.94
CTDSPL-203ENST00000416688 MEX3AA1L020 520 aaKnown RBP2.92□□□□□ -1.94
CTDSPL-203ENST00000416688 BCLAF3A2AJT9 711 aaKnown RBP2.92□□□□□ -1.94
CTDSPL-203ENST00000416688 CLEC18AA5D8T8 446 aa2.92□□□□□ -1.94
CTDSPL-203ENST00000416688 ZNF840PA6NDX5 716 aa2.92□□□□□ -1.94
CTDSPL-203ENST00000416688 FRG2CA6NGY1 282 aa2.92□□□□□ -1.94
CTDSPL-203ENST00000416688 EIF4E1BA6NMX2 242 aaKnown RBP2.92□□□□□ -1.94
CTDSPL-203ENST00000416688 HSPB2A8KAH6 182 aa2.92□□□□□ -1.94
CTDSPL-203ENST00000416688 KCNU1A8MYU2 1149 aa2.92□□□□□ -1.94
CTDSPL-203ENST00000416688 F8W735 103 aaPredicted RBP2.92□□□□□ -1.94
CTDSPL-203ENST00000416688 NPIPA3F8WFD2 350 aa2.92□□□□□ -1.94
CTDSPL-203ENST00000416688 RNASEK-C17orf49H0YIS7 233 aa2.92□□□□□ -1.94
CTDSPL-203ENST00000416688 TEX46H3BTG2 121 aa2.92□□□□□ -1.94
CTDSPL-203ENST00000416688 P2RY10O00398 339 aa2.92□□□□□ -1.94
CTDSPL-203ENST00000416688 HSPA12AO43301 675 aa2.92□□□□□ -1.94
CTDSPL-203ENST00000416688 EMC8O43402 210 aa2.92□□□□□ -1.94
CTDSPL-203ENST00000416688 SLC28A2O43868 658 aa2.92□□□□□ -1.94
CTDSPL-203ENST00000416688 PRAMEF2O60811 474 aa2.92□□□□□ -1.94
CTDSPL-203ENST00000416688 NDUFA7O95182 113 aa2.92□□□□□ -1.94
CTDSPL-203ENST00000416688 OAZ2O95190 189 aa2.92□□□□□ -1.94
CTDSPL-203ENST00000416688 BMP10O95393 424 aa2.92□□□□□ -1.94
CTDSPL-203ENST00000416688 IGHV2-70P01814 119 aa2.92□□□□□ -1.94
CTDSPL-203ENST00000416688 NUDT17P0C025 328 aa2.92□□□□□ -1.94
CTDSPL-203ENST00000416688 CTXN2P0C2S0 81 aa2.92□□□□□ -1.94
CTDSPL-203ENST00000416688 SLURP2P0DP57 97 aa2.92□□□□□ -1.94
CTDSPL-203ENST00000416688 CTSAP10619 480 aa2.92□□□□□ -1.94
CTDSPL-203ENST00000416688 BMP3P12645 472 aa2.92□□□□□ -1.94
CTDSPL-203ENST00000416688 UQCRBP14927 111 aa2.92□□□□□ -1.94
CTDSPL-203ENST00000416688 CPN1P15169 458 aa2.92□□□□□ -1.94
CTDSPL-203ENST00000416688 FSTP19883 344 aa2.92□□□□□ -1.94
CTDSPL-203ENST00000416688 PRPS1L1P21108 318 aa2.92□□□□□ -1.94
CTDSPL-203ENST00000416688 CNR1P21554 472 aa2.92□□□□□ -1.94
CTDSPL-203ENST00000416688 PCMT1P22061 227 aa2.92□□□□□ -1.94
CTDSPL-203ENST00000416688 STOMP27105 288 aa2.92□□□□□ -1.94
CTDSPL-203ENST00000416688 HIBADHP31937 336 aaKnown RBP2.92□□□□□ -1.94
CTDSPL-203ENST00000416688 ARRB2P32121 409 aa2.92□□□□□ -1.94
CTDSPL-203ENST00000416688 GKP32189 559 aa2.92□□□□□ -1.94
CTDSPL-203ENST00000416688 AVPR1AP37288 418 aa2.92□□□□□ -1.94
CTDSPL-203ENST00000416688 TMPOP42166 694 aaKnown RBP2.92□□□□□ -1.94
CTDSPL-203ENST00000416688 ETV4P43268 484 aa2.92□□□□□ -1.94
CTDSPL-203ENST00000416688 CRYBB2P43320 205 aa2.92□□□□□ -1.94
CTDSPL-203ENST00000416688 RPL21P46778 160 aaKnown RBP2.92□□□□□ -1.94
CTDSPL-203ENST00000416688 GPR12P47775 334 aa2.92□□□□□ -1.94
CTDSPL-203ENST00000416688 STK19P49842 368 aaPredicted RBP2.92□□□□□ -1.94
CTDSPL-203ENST00000416688 MMP15P51511 669 aa2.92□□□□□ -1.94
CTDSPL-203ENST00000416688 PLK1P53350 603 aa2.92□□□□□ -1.94
CTDSPL-203ENST00000416688 NUDT6P53370 316 aa2.92□□□□□ -1.94
CTDSPL-203ENST00000416688 ACLYP53396 1101 aa2.92□□□□□ -1.94
CTDSPL-203ENST00000416688 ATP6V0D1P61421 351 aa2.92□□□□□ -1.94
CTDSPL-203ENST00000416688 HERV-K104P63124 156 aa2.92□□□□□ -1.94
CTDSPL-203ENST00000416688 HERVK_113P63132 956 aa2.92□□□□□ -1.94
CTDSPL-203ENST00000416688 ERVK-8P63133 956 aa2.92□□□□□ -1.94
CTDSPL-203ENST00000416688 ADARB1P78563 741 aaKnown RBP2.92□□□□□ -1.94
CTDSPL-203ENST00000416688 OGDHQ02218 1023 aa2.92□□□□□ -1.94
CTDSPL-203ENST00000416688 IRF8Q02556 426 aa2.92□□□□□ -1.94
CTDSPL-203ENST00000416688 CYP24A1Q07973 514 aa2.92□□□□□ -1.94
CTDSPL-203ENST00000416688 TROAPQ12815 778 aa2.92□□□□□ -1.94
CTDSPL-203ENST00000416688 SMARCB1Q12824 385 aa2.92□□□□□ -1.94
CTDSPL-203ENST00000416688 TSPAN31Q12999 210 aa2.92□□□□□ -1.94
CTDSPL-203ENST00000416688 GRIK2Q13002 908 aa2.92□□□□□ -1.94
CTDSPL-203ENST00000416688 SLAMF1Q13291 335 aa2.92□□□□□ -1.94
CTDSPL-203ENST00000416688 SNTA1Q13424 505 aa2.92□□□□□ -1.94
CTDSPL-203ENST00000416688 NFATC2Q13469 925 aa2.92□□□□□ -1.94
CTDSPL-203ENST00000416688 MED21Q13503 144 aa2.92□□□□□ -1.94
CTDSPL-203ENST00000416688 NFYCQ13952 458 aa2.92□□□□□ -1.94
CTDSPL-203ENST00000416688 HNF4GQ14541 408 aa2.92□□□□□ -1.94
CTDSPL-203ENST00000416688 HLXQ14774 488 aaPredicted RBP2.92□□□□□ -1.94
CTDSPL-203ENST00000416688 FASTKD3Q14CZ7 662 aaKnown RBP2.92□□□□□ -1.94
CTDSPL-203ENST00000416688 HSPB2Q16082 182 aa2.92□□□□□ -1.94
CTDSPL-203ENST00000416688 ZNF699Q32M78 642 aa2.92□□□□□ -1.94
CTDSPL-203ENST00000416688 PLK5Q496M5 336 aa2.92□□□□□ -1.94
CTDSPL-203ENST00000416688 PAN3Q58A45 887 aaKnown RBP2.92□□□□□ -1.94
CTDSPL-203ENST00000416688 TMEM63BQ5T3F8 832 aa2.92□□□□□ -1.94
CTDSPL-203ENST00000416688 ZNF691Q5VV52 312 aa2.92□□□□□ -1.94
CTDSPL-203ENST00000416688 KHDRBS2Q5VWX1 349 aaKnown RBP2.92□□□□□ -1.94
CTDSPL-203ENST00000416688 RNLSQ5VYX0 342 aa2.92□□□□□ -1.94
CTDSPL-203ENST00000416688 PLEKHA7Q6IQ23 1121 aa2.92□□□□□ -1.94
CTDSPL-203ENST00000416688 FAM166AQ6J272 317 aa2.92□□□□□ -1.94
CTDSPL-203ENST00000416688 SLC8B1Q6J4K2 584 aa2.92□□□□□ -1.94
CTDSPL-203ENST00000416688 CES5AQ6NT32 575 aa2.92□□□□□ -1.94
CTDSPL-203ENST00000416688 ADAM5Q6NVV9 412 aa2.92□□□□□ -1.94
CTDSPL-203ENST00000416688 DUS1LQ6P1R4 473 aaKnown RBP2.92□□□□□ -1.94
CTDSPL-203ENST00000416688 CWC27Q6UX04 472 aaKnown RBP2.92□□□□□ -1.94
CTDSPL-203ENST00000416688 CLEC18BQ6UXF7 455 aa2.92□□□□□ -1.94
CTDSPL-203ENST00000416688 KYAT3Q6YP21 454 aaKnown RBP2.92□□□□□ -1.94
CTDSPL-203ENST00000416688 GCNT7Q6ZNI0 430 aa2.92□□□□□ -1.94
CTDSPL-203ENST00000416688 PQLC2Q6ZP29 291 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms