RNA–Protein interactions for RNA: ENST00000415428.5

LMBR1-204, Transcript of limb development membrane protein 1, humanhuman

TSL 1 (best)

Gene LMBR1, Length 3,457 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-204ENST00000415428 TAGAPQ8N103 731 aa5.47□□□□□ -1.53
LMBR1-204ENST00000415428 CLDN19Q8N6F1 224 aa5.47□□□□□ -1.53
LMBR1-204ENST00000415428 TMEM52Q8NDY8 209 aa5.47□□□□□ -1.53
LMBR1-204ENST00000415428 CFAP61Q8NHU2 1237 aa5.47□□□□□ -1.53
LMBR1-204ENST00000415428 SLC13A3Q8WWT9 602 aa5.47□□□□□ -1.53
LMBR1-204ENST00000415428 BRINP2Q9C0B6 783 aa5.47□□□□□ -1.53
LMBR1-204ENST00000415428 SMARCAL1Q9NZC9 954 aa5.47□□□□□ -1.53
LMBR1-204ENST00000415428 KLHL8Q9P2G9 620 aaPredicted RBP5.47□□□□□ -1.53
LMBR1-204ENST00000415428 CES1P1Q9UKY3 287 aa5.47□□□□□ -1.53
LMBR1-204ENST00000415428 PDE10AQ9Y233 779 aa5.47□□□□□ -1.53
LMBR1-204ENST00000415428 OARD1Q9Y530 152 aa5.47□□□□□ -1.53
LMBR1-204ENST00000415428 SETD2Q9BYW2 2564 aaPredicted RBP5.47□□□□□ -1.53
LMBR1-204ENST00000415428 SPTBN1Q01082 2364 aaKnown RBP5.47□□□□□ -1.53
LMBR1-204ENST00000415428 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.47□□□□□ -1.53
LMBR1-204ENST00000415428 FOXE1O00358 373 aaPredicted RBP5.47□□□□□ -1.53
LMBR1-204ENST00000415428 PFDN6O15212 129 aa5.47□□□□□ -1.53
LMBR1-204ENST00000415428 SRD5A1P18405 259 aa5.47□□□□□ -1.53
LMBR1-204ENST00000415428 IRF9Q00978 393 aa5.47□□□□□ -1.53
LMBR1-204ENST00000415428 IQCB1Q15051 598 aa5.47□□□□□ -1.53
LMBR1-204ENST00000415428 ZNF239Q16600 458 aaKnown RBP5.47□□□□□ -1.53
LMBR1-204ENST00000415428 STEAP4Q687X5 459 aa5.47□□□□□ -1.53
LMBR1-204ENST00000415428 AAGABQ6PD74 315 aa5.47□□□□□ -1.53
LMBR1-204ENST00000415428 C2CD4AQ8NCU7 369 aaPredicted RBP5.47□□□□□ -1.53
LMBR1-204ENST00000415428 SLC5A11Q8WWX8 675 aa5.47□□□□□ -1.53
LMBR1-204ENST00000415428 PRR14Q9BWN1 585 aa5.47□□□□□ -1.53
LMBR1-204ENST00000415428 SHARPINQ9H0F6 387 aa5.47□□□□□ -1.53
LMBR1-204ENST00000415428 PRTFDC1Q9NRG1 225 aa5.47□□□□□ -1.53
LMBR1-204ENST00000415428 PIH1D1Q9NWS0 290 aaKnown RBP5.47□□□□□ -1.53
LMBR1-204ENST00000415428 TAC3Q9UHF0 121 aa5.47□□□□□ -1.53
LMBR1-204ENST00000415428 A0A1W2PQD3 144 aa5.47□□□□□ -1.53
LMBR1-204ENST00000415428 B4DXG7 233 aa5.47□□□□□ -1.53
LMBR1-204ENST00000415428 FADS1O60427 444 aa5.47□□□□□ -1.53
LMBR1-204ENST00000415428 GAAP10253 952 aa5.47□□□□□ -1.53
LMBR1-204ENST00000415428 SLC16A1P53985 500 aa5.47□□□□□ -1.53
LMBR1-204ENST00000415428 TNFRSF17Q02223 184 aa5.47□□□□□ -1.53
LMBR1-204ENST00000415428 CUL3Q13618 768 aa5.47□□□□□ -1.53
LMBR1-204ENST00000415428 RCAN2Q14206 197 aa5.47□□□□□ -1.53
LMBR1-204ENST00000415428 RPS6KA2Q15349 733 aa5.47□□□□□ -1.53
LMBR1-204ENST00000415428 FASTKD1Q53R41 847 aaKnown RBP5.47□□□□□ -1.53
LMBR1-204ENST00000415428 ACSBG2Q5FVE4 666 aa5.47□□□□□ -1.53
LMBR1-204ENST00000415428 TIMM23BQ5SRD1 257 aa5.47□□□□□ -1.53
LMBR1-204ENST00000415428 SHISA6Q6ZSJ9 500 aa5.47□□□□□ -1.53
LMBR1-204ENST00000415428 FBXO30Q8TB52 745 aa5.47□□□□□ -1.53
LMBR1-204ENST00000415428 SLC35G2Q8TBE7 412 aa5.47□□□□□ -1.53
LMBR1-204ENST00000415428 MTBPQ96DY7 904 aa5.47□□□□□ -1.53
LMBR1-204ENST00000415428 CITED1Q99966 193 aa5.47□□□□□ -1.53
LMBR1-204ENST00000415428 A4GALTQ9NPC4 353 aa5.47□□□□□ -1.53
LMBR1-204ENST00000415428 KCNS2Q9ULS6 477 aa5.47□□□□□ -1.53
LMBR1-204ENST00000415428 CFL2Q9Y281 166 aa5.47□□□□□ -1.53
LMBR1-204ENST00000415428 IGHV3-20A0A0C4DH32 117 aa5.46□□□□□ -1.53
LMBR1-204ENST00000415428 KIF2AO00139 706 aaPredicted RBP5.46□□□□□ -1.53
LMBR1-204ENST00000415428 CST8O60676 142 aa5.46□□□□□ -1.53
LMBR1-204ENST00000415428 TBX19O60806 448 aa5.46□□□□□ -1.53
LMBR1-204ENST00000415428 METTL18O95568 372 aa5.46□□□□□ -1.53
LMBR1-204ENST00000415428 ETHE1O95571 254 aa5.46□□□□□ -1.53
LMBR1-204ENST00000415428 HSPA4LO95757 839 aa5.46□□□□□ -1.53
LMBR1-204ENST00000415428 CHN2P52757 468 aa5.46□□□□□ -1.53
LMBR1-204ENST00000415428 AGAP6Q5VW22 663 aa5.46□□□□□ -1.53
LMBR1-204ENST00000415428 PDPRQ8NCN5 879 aa5.46□□□□□ -1.53
LMBR1-204ENST00000415428 CCNYQ8ND76 341 aa5.46□□□□□ -1.53
LMBR1-204ENST00000415428 RNF128Q8TEB7 428 aa5.46□□□□□ -1.53
LMBR1-204ENST00000415428 MS4A8Q9BY19 250 aa5.46□□□□□ -1.53
LMBR1-204ENST00000415428 PHACTR1Q9C0D0 580 aa5.46□□□□□ -1.53
LMBR1-204ENST00000415428 SLC6A15Q9H2J7 730 aa5.46□□□□□ -1.53
LMBR1-204ENST00000415428 MARCH4Q9P2E8 410 aaPredicted RBP5.46□□□□□ -1.53
LMBR1-204ENST00000415428 PHF11Q9UIL8 331 aa5.46□□□□□ -1.53
LMBR1-204ENST00000415428 DYSFO75923 2080 aa5.46□□□□□ -1.54
LMBR1-204ENST00000415428 LOC390937A0A1W2PQ73 354 aa5.46□□□□□ -1.54
LMBR1-204ENST00000415428 CASKO14936 926 aa5.46□□□□□ -1.54
LMBR1-204ENST00000415428 LMX1BO60663 402 aa5.46□□□□□ -1.54
LMBR1-204ENST00000415428 TFP02787 698 aa5.46□□□□□ -1.54
LMBR1-204ENST00000415428 RNASE1P07998 156 aaKnown RBP5.46□□□□□ -1.54
LMBR1-204ENST00000415428 SOD3P08294 240 aa5.46□□□□□ -1.54
LMBR1-204ENST00000415428 POU2F1P14859 743 aa5.46□□□□□ -1.54
LMBR1-204ENST00000415428 BTG2P78543 158 aa5.46□□□□□ -1.54
LMBR1-204ENST00000415428 CCZ1BP86790 482 aa5.46□□□□□ -1.54
LMBR1-204ENST00000415428 CCZ1P86791 482 aaPredicted RBP5.46□□□□□ -1.54
LMBR1-204ENST00000415428 UBXN1Q04323 297 aa5.46□□□□□ -1.54
LMBR1-204ENST00000415428 FCRLBQ6BAA4 426 aa5.46□□□□□ -1.54
LMBR1-204ENST00000415428 TFAP2EQ6VUC0 442 aa5.46□□□□□ -1.54
LMBR1-204ENST00000415428 CENPUQ71F23 418 aa5.46□□□□□ -1.54
LMBR1-204ENST00000415428 PID1Q7Z2X4 250 aa5.46□□□□□ -1.54
LMBR1-204ENST00000415428 C17orf64Q86WR6 236 aa5.46□□□□□ -1.54
LMBR1-204ENST00000415428 OR52K1Q8NGK4 314 aa5.46□□□□□ -1.54
LMBR1-204ENST00000415428 ZNF442Q9H7R0 627 aa5.46□□□□□ -1.54
LMBR1-204ENST00000415428 CHMP5Q9NZZ3 219 aa5.46□□□□□ -1.54
LMBR1-204ENST00000415428 ASB4Q9Y574 426 aa5.46□□□□□ -1.54
LMBR1-204ENST00000415428 FLNAP21333 2647 aaKnown RBP5.46□□□□□ -1.54
LMBR1-204ENST00000415428 IGHV4-30-2A0A087WSY4 118 aa5.46□□□□□ -1.54
LMBR1-204ENST00000415428 RNF223E7ERA6 249 aa5.46□□□□□ -1.54
LMBR1-204ENST00000415428 TRIM77I1YAP6 450 aa5.46□□□□□ -1.54
LMBR1-204ENST00000415428 KRT1P04264 644 aa5.46□□□□□ -1.54
LMBR1-204ENST00000415428 GCKP35557 465 aa5.46□□□□□ -1.54
LMBR1-204ENST00000415428 RPL21P46778 160 aaKnown RBP5.46□□□□□ -1.54
LMBR1-204ENST00000415428 PNLIPRP2P54317 469 aa5.46□□□□□ -1.54
LMBR1-204ENST00000415428 MRPS22P82650 360 aaKnown RBP5.46□□□□□ -1.54
LMBR1-204ENST00000415428 PLGLB1Q02325 96 aa5.46□□□□□ -1.54
LMBR1-204ENST00000415428 STX1AQ16623 288 aa5.46□□□□□ -1.54
LMBR1-204ENST00000415428 MEI1Q5TIA1 1274 aa5.46□□□□□ -1.54
LMBR1-204ENST00000415428 MRNIPQ6NTE8 343 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms