RNA–Protein interactions for RNA: ENST00000415107.5

ATG4B-207, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 356 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-207ENST00000415107 CGB2Q6NT52 195 aa11.1□□□□□ -0.63
ATG4B-207ENST00000415107 C19orf48Q6RUI8 117 aa11.1□□□□□ -0.63
ATG4B-207ENST00000415107 VWA5B2Q8N398 1253 aa11.1□□□□□ -0.63
ATG4B-207ENST00000415107 FDCSPQ8NFU4 85 aa11.1□□□□□ -0.63
ATG4B-207ENST00000415107 ZFP28Q8NHY6 868 aa11.1□□□□□ -0.63
ATG4B-207ENST00000415107 NCLNQ969V3 563 aa11.1□□□□□ -0.63
ATG4B-207ENST00000415107 EXOSC8Q96B26 276 aaKnown RBP11.1□□□□□ -0.63
ATG4B-207ENST00000415107 CHMP6Q96FZ7 201 aa11.1□□□□□ -0.63
ATG4B-207ENST00000415107 SENP5Q96HI0 755 aaPredicted RBP11.1□□□□□ -0.63
ATG4B-207ENST00000415107 UBL7Q96S82 380 aaPredicted RBP11.1□□□□□ -0.63
ATG4B-207ENST00000415107 EBF4Q9BQW3 602 aa11.1□□□□□ -0.63
ATG4B-207ENST00000415107 DPY30Q9C005 99 aa11.1□□□□□ -0.63
ATG4B-207ENST00000415107 ZNF552Q9H707 407 aaPredicted RBP11.1□□□□□ -0.63
ATG4B-207ENST00000415107 NEUROD4Q9HD90 331 aa11.1□□□□□ -0.63
ATG4B-207ENST00000415107 FGFR1OP2Q9NVK5 253 aa11.1□□□□□ -0.63
ATG4B-207ENST00000415107 GPR83Q9NYM4 423 aa11.1□□□□□ -0.63
ATG4B-207ENST00000415107 NTMQ9P121 344 aa11.1□□□□□ -0.63
ATG4B-207ENST00000415107 KLHL14Q9P2G3 628 aa11.1□□□□□ -0.63
ATG4B-207ENST00000415107 COPS7AQ9UBW8 275 aa11.1□□□□□ -0.63
ATG4B-207ENST00000415107 BAIAP2L1Q9UHR4 511 aa11.1□□□□□ -0.63
ATG4B-207ENST00000415107 ZNF223Q9UK11 482 aaPredicted RBP11.1□□□□□ -0.63
ATG4B-207ENST00000415107 DOCK10Q96BY6 2186 aa11.1□□□□□ -0.63
ATG4B-207ENST00000415107 GOLGA8QA0A0J9YX86 632 aa11.09□□□□□ -0.63
ATG4B-207ENST00000415107 A0A1W2PS29 197 aa11.09□□□□□ -0.63
ATG4B-207ENST00000415107 GOLGA8OA6NCC3 632 aa11.09□□□□□ -0.63
ATG4B-207ENST00000415107 E9PBE3 544 aa11.09□□□□□ -0.63
ATG4B-207ENST00000415107 GOLGA8NF8WBI6 632 aa11.09□□□□□ -0.63
ATG4B-207ENST00000415107 RNASET2O00584 256 aaKnown RBP11.09□□□□□ -0.63
ATG4B-207ENST00000415107 UBDO15205 165 aa11.09□□□□□ -0.63
ATG4B-207ENST00000415107 DNAJB5O75953 348 aa11.09□□□□□ -0.63
ATG4B-207ENST00000415107 PSMG1O95456 288 aa11.09□□□□□ -0.63
ATG4B-207ENST00000415107 ITGAMP11215 1152 aa11.09□□□□□ -0.63
ATG4B-207ENST00000415107 S1PR1P21453 382 aa11.09□□□□□ -0.63
ATG4B-207ENST00000415107 ITGA3P26006 1051 aa11.09□□□□□ -0.63
ATG4B-207ENST00000415107 LSP1P33241 339 aa11.09□□□□□ -0.63
ATG4B-207ENST00000415107 FEN1P39748 380 aaKnown RBP11.09□□□□□ -0.63
ATG4B-207ENST00000415107 SLC37A1P57057 533 aa11.09□□□□□ -0.63
ATG4B-207ENST00000415107 PSPHP78330 225 aa11.09□□□□□ -0.63
ATG4B-207ENST00000415107 DUSP2Q05923 314 aa11.09□□□□□ -0.63
ATG4B-207ENST00000415107 LRRC74AQ0VAA2 488 aa11.09□□□□□ -0.63
ATG4B-207ENST00000415107 KCNAB2Q13303 367 aa11.09□□□□□ -0.63
ATG4B-207ENST00000415107 PRSS53Q2L4Q9 553 aa11.09□□□□□ -0.63
ATG4B-207ENST00000415107 CPTPQ5TA50 214 aa11.09□□□□□ -0.63
ATG4B-207ENST00000415107 C6orf163Q5TEZ5 329 aa11.09□□□□□ -0.63
ATG4B-207ENST00000415107 AGAP7PQ5VUJ5 663 aa11.09□□□□□ -0.63
ATG4B-207ENST00000415107 PCSK4Q6UW60 755 aa11.09□□□□□ -0.63
ATG4B-207ENST00000415107 DGAT2L6Q6ZPD8 337 aa11.09□□□□□ -0.63
ATG4B-207ENST00000415107 MSANTD1Q6ZTZ1 278 aa11.09□□□□□ -0.63
ATG4B-207ENST00000415107 SLC5A8Q8N695 610 aa11.09□□□□□ -0.63
ATG4B-207ENST00000415107 CLHC1Q8NHS4 586 aa11.09□□□□□ -0.63
ATG4B-207ENST00000415107 CDC26Q8NHZ8 85 aa11.09□□□□□ -0.63
ATG4B-207ENST00000415107 THOC3Q96J01 351 aaKnown RBP11.09□□□□□ -0.63
ATG4B-207ENST00000415107 AMDHD1Q96NU7 426 aa11.09□□□□□ -0.63
ATG4B-207ENST00000415107 AGAP4Q96P64 663 aa11.09□□□□□ -0.63
ATG4B-207ENST00000415107 LMF1Q96S06 567 aa11.09□□□□□ -0.63
ATG4B-207ENST00000415107 SLC25A23Q9BV35 468 aa11.09□□□□□ -0.63
ATG4B-207ENST00000415107 GLIPR2Q9H4G4 154 aa11.09□□□□□ -0.63
ATG4B-207ENST00000415107 ZNF385DQ9H6B1 395 aa11.09□□□□□ -0.63
ATG4B-207ENST00000415107 NPHS2Q9NP85 383 aa11.09□□□□□ -0.63
ATG4B-207ENST00000415107 SLAMF7Q9NQ25 335 aa11.09□□□□□ -0.63
ATG4B-207ENST00000415107 PTGFRNQ9P2B2 879 aa11.09□□□□□ -0.63
ATG4B-207ENST00000415107 TEKT2Q9UIF3 430 aa11.09□□□□□ -0.63
ATG4B-207ENST00000415107 CFL2Q9Y281 166 aa11.09□□□□□ -0.63
ATG4B-207ENST00000415107 ATMQ13315 3056 aa11.08□□□□□ -0.64
ATG4B-207ENST00000415107 CACNA1BQ00975 2339 aa11.08□□□□□ -0.64
ATG4B-207ENST00000415107 ATXN7O15265 892 aaPredicted RBP11.08□□□□□ -0.64
ATG4B-207ENST00000415107 SCN2BO60939 215 aa11.08□□□□□ -0.64
ATG4B-207ENST00000415107 ZFAND5O76080 213 aa11.08□□□□□ -0.64
ATG4B-207ENST00000415107 LRATO95237 230 aa11.08□□□□□ -0.64
ATG4B-207ENST00000415107 VIMP08670 466 aaKnown RBP11.08□□□□□ -0.64
ATG4B-207ENST00000415107 CT62P0C5K7 136 aa11.08□□□□□ -0.64
ATG4B-207ENST00000415107 TNNI3P19429 210 aa11.08□□□□□ -0.64
ATG4B-207ENST00000415107 NT5EP21589 574 aa11.08□□□□□ -0.64
ATG4B-207ENST00000415107 KIR3DL1P43629 444 aa11.08□□□□□ -0.64
ATG4B-207ENST00000415107 MFAP5Q13361 173 aa11.08□□□□□ -0.64
ATG4B-207ENST00000415107 FHL5Q5TD97 284 aa11.08□□□□□ -0.64
ATG4B-207ENST00000415107 NXNQ6DKJ4 435 aa11.08□□□□□ -0.64
ATG4B-207ENST00000415107 ISLR2Q6UXK2 745 aa11.08□□□□□ -0.64
ATG4B-207ENST00000415107 TMEM64Q6YI46 380 aa11.08□□□□□ -0.64
ATG4B-207ENST00000415107 HSDL2Q6YN16 418 aa11.08□□□□□ -0.64
ATG4B-207ENST00000415107 CCDC116Q8IYX3 515 aa11.08□□□□□ -0.64
ATG4B-207ENST00000415107 OR2L13Q8N349 312 aa11.08□□□□□ -0.64
ATG4B-207ENST00000415107 KRTCAP2Q8N6L1 136 aa11.08□□□□□ -0.64
ATG4B-207ENST00000415107 ZNF615Q8N8J6 731 aa11.08□□□□□ -0.64
ATG4B-207ENST00000415107 ZNF441Q8N8Z8 693 aa11.08□□□□□ -0.64
ATG4B-207ENST00000415107 OR5L2Q8NGL0 311 aa11.08□□□□□ -0.64
ATG4B-207ENST00000415107 BRIX1Q8TDN6 353 aaKnown RBP11.08□□□□□ -0.64
ATG4B-207ENST00000415107 TM9SF4Q92544 642 aa11.08□□□□□ -0.64
ATG4B-207ENST00000415107 HOXB13Q92826 284 aaPredicted RBP11.08□□□□□ -0.64
ATG4B-207ENST00000415107 GFM2Q969S9 779 aaKnown RBP11.08□□□□□ -0.64
ATG4B-207ENST00000415107 PPWD1Q96BP3 646 aaKnown RBP11.08□□□□□ -0.64
ATG4B-207ENST00000415107 ZNF354BQ96LW1 612 aa11.08□□□□□ -0.64
ATG4B-207ENST00000415107 BBS4Q96RK4 519 aa11.08□□□□□ -0.64
ATG4B-207ENST00000415107 DUSP26Q9BV47 211 aa11.08□□□□□ -0.64
ATG4B-207ENST00000415107 NUDT9Q9BW91 350 aa11.08□□□□□ -0.64
ATG4B-207ENST00000415107 OR8D2Q9GZM6 311 aa11.08□□□□□ -0.64
ATG4B-207ENST00000415107 TRIM45Q9H8W5 580 aaPredicted RBP11.08□□□□□ -0.64
ATG4B-207ENST00000415107 FAM120CQ9NX05 1096 aaKnown RBP11.08□□□□□ -0.64
ATG4B-207ENST00000415107 SH3BP4Q9P0V3 963 aa11.08□□□□□ -0.64
ATG4B-207ENST00000415107 LHX6Q9UPM6 363 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms