RNA–Protein interactions for RNA: ENST00000414978.5

MCF2-204, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,813 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-204ENST00000414978 FCRLBQ6BAA4 426 aa2.36□□□□□ -2.03
MCF2-204ENST00000414978 FAM166AQ6J272 317 aa2.36□□□□□ -2.03
MCF2-204ENST00000414978 C6orf89Q6UWU4 347 aa2.36□□□□□ -2.03
MCF2-204ENST00000414978 LIN28BQ6ZN17 250 aaKnown RBP eCLIP2.36□□□□□ -2.03
MCF2-204ENST00000414978 ZNF841Q6ZN19 808 aa2.36□□□□□ -2.03
MCF2-204ENST00000414978 STOX1Q6ZVD7 989 aa2.36□□□□□ -2.03
MCF2-204ENST00000414978 TCEANCQ8N8B7 351 aa2.36□□□□□ -2.03
MCF2-204ENST00000414978 ZNF398Q8TD17 642 aa2.36□□□□□ -2.03
MCF2-204ENST00000414978 KIAA1143Q96AT1 154 aaPredicted RBP2.36□□□□□ -2.03
MCF2-204ENST00000414978 MRPL53Q96EL3 112 aaKnown RBP2.36□□□□□ -2.03
MCF2-204ENST00000414978 MSTO1Q9BUK6 570 aa2.36□□□□□ -2.03
MCF2-204ENST00000414978 LRRC2Q9BYS8 371 aa2.36□□□□□ -2.03
MCF2-204ENST00000414978 SLITRK6Q9H5Y7 841 aa2.36□□□□□ -2.03
MCF2-204ENST00000414978 METTL7AQ9H8H3 244 aa2.36□□□□□ -2.03
MCF2-204ENST00000414978 KIF3AQ9Y496 699 aa2.36□□□□□ -2.03
MCF2-204ENST00000414978 ATP6V1DQ9Y5K8 247 aa2.36□□□□□ -2.03
MCF2-204ENST00000414978 SLC4A4Q9Y6R1 1079 aa2.36□□□□□ -2.03
MCF2-204ENST00000414978 ZDBF2Q9HCK1 2354 aa2.35□□□□□ -2.03
MCF2-204ENST00000414978 TRAV18A0A075B6X5 111 aa2.35□□□□□ -2.03
MCF2-204ENST00000414978 K7ERI5 159 aa2.35□□□□□ -2.03
MCF2-204ENST00000414978 KCNN4O15554 427 aa2.35□□□□□ -2.03
MCF2-204ENST00000414978 MLNRO43193 412 aa2.35□□□□□ -2.03
MCF2-204ENST00000414978 ZNF208O43345 1280 aa2.35□□□□□ -2.03
MCF2-204ENST00000414978 NDUFB4O95168 129 aa2.35□□□□□ -2.03
MCF2-204ENST00000414978 OTCP00480 354 aa2.35□□□□□ -2.03
MCF2-204ENST00000414978 PGK2P07205 417 aa2.35□□□□□ -2.03
MCF2-204ENST00000414978 GSTT2P0CG29 244 aa2.35□□□□□ -2.03
MCF2-204ENST00000414978 GSTT2BP0CG30 244 aa2.35□□□□□ -2.03
MCF2-204ENST00000414978 CEACAM1P13688 526 aa2.35□□□□□ -2.03
MCF2-204ENST00000414978 F3P13726 295 aa2.35□□□□□ -2.03
MCF2-204ENST00000414978 ATP5C1P36542 298 aaKnown RBP2.35□□□□□ -2.03
MCF2-204ENST00000414978 SLC9A3P48764 834 aa2.35□□□□□ -2.03
MCF2-204ENST00000414978 PRRX1P54821 245 aa2.35□□□□□ -2.03
MCF2-204ENST00000414978 ZNF169Q14929 603 aaPredicted RBP2.35□□□□□ -2.03
MCF2-204ENST00000414978 RCN1Q15293 331 aa2.35□□□□□ -2.03
MCF2-204ENST00000414978 P2RY14Q15391 338 aa2.35□□□□□ -2.03
MCF2-204ENST00000414978 ALX1Q15699 326 aa2.35□□□□□ -2.03
MCF2-204ENST00000414978 XKR3Q5GH77 459 aa2.35□□□□□ -2.03
MCF2-204ENST00000414978 C10orf120Q5SQS8 335 aa2.35□□□□□ -2.03
MCF2-204ENST00000414978 PIK3CD-AS1Q5SR53 167 aa2.35□□□□□ -2.03
MCF2-204ENST00000414978 UGT3A1Q6NUS8 523 aa2.35□□□□□ -2.03
MCF2-204ENST00000414978 SLC39A4Q6P5W5 647 aa2.35□□□□□ -2.03
MCF2-204ENST00000414978 RHBDF2Q6PJF5 856 aa2.35□□□□□ -2.03
MCF2-204ENST00000414978 ZNF66Q6ZN08 573 aa2.35□□□□□ -2.03
MCF2-204ENST00000414978 MISPQ8IVT2 679 aa2.35□□□□□ -2.03
MCF2-204ENST00000414978 RBFAQ8N0V3 343 aa2.35□□□□□ -2.03
MCF2-204ENST00000414978 FAM184AQ8NB25 1140 aa2.35□□□□□ -2.03
MCF2-204ENST00000414978 PHYHIPQ92561 330 aa2.35□□□□□ -2.03
MCF2-204ENST00000414978 THOC3Q96J01 351 aaKnown RBP2.35□□□□□ -2.03
MCF2-204ENST00000414978 JPH2Q9BR39 696 aaPredicted RBP2.35□□□□□ -2.03
MCF2-204ENST00000414978 VCX2Q9H322 139 aa2.35□□□□□ -2.03
MCF2-204ENST00000414978 ACTL8Q9H568 366 aa2.35□□□□□ -2.03
MCF2-204ENST00000414978 POMKQ9H5K3 350 aa2.35□□□□□ -2.03
MCF2-204ENST00000414978 RAB18Q9NP72 206 aa2.35□□□□□ -2.03
MCF2-204ENST00000414978 IL17BQ9UHF5 180 aa2.35□□□□□ -2.03
MCF2-204ENST00000414978 CHMP2BQ9UQN3 213 aa2.35□□□□□ -2.03
MCF2-204ENST00000414978 ETV7Q9Y603 341 aa2.35□□□□□ -2.03
MCF2-204ENST00000414978 OBSL1O75147 1896 aa2.35□□□□□ -2.03
MCF2-204ENST00000414978 OTOGLQ3ZCN5 2332 aa2.35□□□□□ -2.03
MCF2-204ENST00000414978 VPS37CA5D8V6 355 aaPredicted RBP2.35□□□□□ -2.03
MCF2-204ENST00000414978 ARHGEF35A5YM69 484 aa2.35□□□□□ -2.03
MCF2-204ENST00000414978 F8VZ95 297 aa2.35□□□□□ -2.03
MCF2-204ENST00000414978 EEF2KO00418 725 aaKnown RBP2.35□□□□□ -2.03
MCF2-204ENST00000414978 FLOT1O75955 427 aa2.35□□□□□ -2.03
MCF2-204ENST00000414978 MYZAPP0CAP1 466 aa2.35□□□□□ -2.03
MCF2-204ENST00000414978 IRF2P14316 349 aa2.35□□□□□ -2.03
MCF2-204ENST00000414978 SYT1P21579 422 aa2.35□□□□□ -2.03
MCF2-204ENST00000414978 MAGEA5P43359 124 aa2.35□□□□□ -2.03
MCF2-204ENST00000414978 PCYT1AP49585 367 aa2.35□□□□□ -2.03
MCF2-204ENST00000414978 CLDN8P56748 225 aa2.35□□□□□ -2.03
MCF2-204ENST00000414978 MBTD1Q05BQ5 628 aa2.35□□□□□ -2.03
MCF2-204ENST00000414978 CUL3Q13618 768 aa2.35□□□□□ -2.03
MCF2-204ENST00000414978 CA9Q16790 459 aa2.35□□□□□ -2.03
MCF2-204ENST00000414978 RABGAP1LQ5R372 815 aa2.35□□□□□ -2.03
MCF2-204ENST00000414978 PRAMEF20Q5VT98 475 aa2.35□□□□□ -2.03
MCF2-204ENST00000414978 FAM171BQ6P995 826 aa2.35□□□□□ -2.03
MCF2-204ENST00000414978 TRILQ7L0X0 811 aa2.35□□□□□ -2.03
MCF2-204ENST00000414978 YTHDF3Q7Z739 585 aaKnown RBP2.35□□□□□ -2.03
MCF2-204ENST00000414978 MEX3DQ86XN8 651 aaKnown RBP2.35□□□□□ -2.03
MCF2-204ENST00000414978 MCEMP1Q8IX19 187 aa2.35□□□□□ -2.03
MCF2-204ENST00000414978 PGBD5Q8N414 524 aa2.35□□□□□ -2.03
MCF2-204ENST00000414978 NEXN-AS1Q8NBZ9 246 aa2.35□□□□□ -2.03
MCF2-204ENST00000414978 DOCK7Q96N67 2140 aa2.35□□□□□ -2.03
MCF2-204ENST00000414978 BBC3Q96PG8 261 aaPredicted RBP2.35□□□□□ -2.03
MCF2-204ENST00000414978 CCNL2Q96S94 520 aaPredicted RBP2.35□□□□□ -2.03
MCF2-204ENST00000414978 EGFL8Q99944 293 aa2.35□□□□□ -2.03
MCF2-204ENST00000414978 CCDC77Q9BR77 488 aa2.35□□□□□ -2.03
MCF2-204ENST00000414978 RNF41Q9H4P4 317 aaPredicted RBP2.35□□□□□ -2.03
MCF2-204ENST00000414978 SEMA4GQ9NTN9 838 aa2.35□□□□□ -2.03
MCF2-204ENST00000414978 KCNN3Q9UGI6 736 aa2.35□□□□□ -2.03
MCF2-204ENST00000414978 TEKT2Q9UIF3 430 aa2.35□□□□□ -2.03
MCF2-204ENST00000414978 GAB2Q9UQC2 676 aa2.35□□□□□ -2.03
MCF2-204ENST00000414978 DDX49Q9Y6V7 483 aaKnown RBP2.35□□□□□ -2.03
MCF2-204ENST00000414978 MYO9BQ13459 2157 aa2.35□□□□□ -2.03
MCF2-204ENST00000414978 ERICH2A1L162 156 aa2.35□□□□□ -2.03
MCF2-204ENST00000414978 WASHC1A8K0Z3 465 aa2.35□□□□□ -2.03
MCF2-204ENST00000414978 MEI4A8MW99 385 aa2.35□□□□□ -2.03
MCF2-204ENST00000414978 WASH3PC4AMC7 463 aa2.35□□□□□ -2.03
MCF2-204ENST00000414978 FAM90A26D6RGX4 464 aa2.35□□□□□ -2.03
MCF2-204ENST00000414978 H3BQV1 296 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms