RNA–Protein interactions for RNA: ENST00000414963.2

SF3B1-204, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 651 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-204ENST00000414963 MOAP1Q96BY2 351 aa13.34□□□□□ -0.27
SF3B1-204ENST00000414963 ELP4Q96EB1 424 aa13.34□□□□□ -0.27
SF3B1-204ENST00000414963 ZNF578Q96N58 590 aaPredicted RBP13.34□□□□□ -0.27
SF3B1-204ENST00000414963 DGAT2Q96PD7 388 aa13.34□□□□□ -0.27
SF3B1-204ENST00000414963 SH3GL1Q99961 368 aa13.34□□□□□ -0.27
SF3B1-204ENST00000414963 CXorf21Q9HAI6 301 aa13.34□□□□□ -0.27
SF3B1-204ENST00000414963 PTGFRNQ9P2B2 879 aa13.34□□□□□ -0.27
SF3B1-204ENST00000414963 TMEM181Q9P2C4 612 aa13.34□□□□□ -0.27
SF3B1-204ENST00000414963 ABCD2Q9UBJ2 740 aa13.34□□□□□ -0.27
SF3B1-204ENST00000414963 ZNF639Q9UID6 485 aa13.34□□□□□ -0.27
SF3B1-204ENST00000414963 PRPF19Q9UMS4 504 aaKnown RBP13.34□□□□□ -0.27
SF3B1-204ENST00000414963 AP3M1Q9Y2T2 418 aa13.34□□□□□ -0.27
SF3B1-204ENST00000414963 PTPRBP23467 1997 aa13.34□□□□□ -0.27
SF3B1-204ENST00000414963 C21orf140B9A014 251 aa13.33□□□□□ -0.28
SF3B1-204ENST00000414963 TERTO14746 1132 aaKnown RBP13.33□□□□□ -0.28
SF3B1-204ENST00000414963 GSC2O15499 205 aa13.33□□□□□ -0.28
SF3B1-204ENST00000414963 OR10H2O60403 315 aa13.33□□□□□ -0.28
SF3B1-204ENST00000414963 DNAJC8O75937 253 aaPredicted RBP13.33□□□□□ -0.28
SF3B1-204ENST00000414963 HEXBP07686 556 aa13.33□□□□□ -0.28
SF3B1-204ENST00000414963 ABCB1P08183 1280 aaPredicted RBP13.33□□□□□ -0.28
SF3B1-204ENST00000414963 GPC1P35052 558 aa13.33□□□□□ -0.28
SF3B1-204ENST00000414963 PLA2G5P39877 138 aa13.33□□□□□ -0.28
SF3B1-204ENST00000414963 STAT5AP42229 794 aa13.33□□□□□ -0.28
SF3B1-204ENST00000414963 CCT3P49368 545 aaKnown RBP13.33□□□□□ -0.28
SF3B1-204ENST00000414963 EMP2P54851 167 aa13.33□□□□□ -0.28
SF3B1-204ENST00000414963 VAC14Q08AM6 782 aa13.33□□□□□ -0.28
SF3B1-204ENST00000414963 GAB1Q13480 694 aa13.33□□□□□ -0.28
SF3B1-204ENST00000414963 LTB4RQ15722 352 aa13.33□□□□□ -0.28
SF3B1-204ENST00000414963 GTDC1Q4AE62 458 aa13.33□□□□□ -0.28
SF3B1-204ENST00000414963 FHL5Q5TD97 284 aa13.33□□□□□ -0.28
SF3B1-204ENST00000414963 MFSD4BQ5TF39 518 aa13.33□□□□□ -0.28
SF3B1-204ENST00000414963 SAXO2Q658L1 398 aa13.33□□□□□ -0.28
SF3B1-204ENST00000414963 BHLHB9Q6PI77 547 aa13.33□□□□□ -0.28
SF3B1-204ENST00000414963 TMEM205Q6UW68 189 aa13.33□□□□□ -0.28
SF3B1-204ENST00000414963 ZNF771Q7L3S4 317 aaPredicted RBP13.33□□□□□ -0.28
SF3B1-204ENST00000414963 GPR155Q7Z3F1 870 aa13.33□□□□□ -0.28
SF3B1-204ENST00000414963 DTX1Q86Y01 620 aa13.33□□□□□ -0.28
SF3B1-204ENST00000414963 OR2L13Q8N349 312 aa13.33□□□□□ -0.28
SF3B1-204ENST00000414963 OR2Y1Q8NGV0 311 aa13.33□□□□□ -0.28
SF3B1-204ENST00000414963 CT55Q8WUE5 264 aa13.33□□□□□ -0.28
SF3B1-204ENST00000414963 RIT1Q92963 219 aa13.33□□□□□ -0.28
SF3B1-204ENST00000414963 TSLPQ969D9 159 aa13.33□□□□□ -0.28
SF3B1-204ENST00000414963 TMEM125Q96AQ2 219 aa13.33□□□□□ -0.28
SF3B1-204ENST00000414963 PPWD1Q96BP3 646 aaKnown RBP13.33□□□□□ -0.28
SF3B1-204ENST00000414963 FAM122AQ96E09 287 aa13.33□□□□□ -0.28
SF3B1-204ENST00000414963 NEURL3Q96EH8 262 aa13.33□□□□□ -0.28
SF3B1-204ENST00000414963 CPPED1Q9BRF8 314 aaPredicted RBP13.33□□□□□ -0.28
SF3B1-204ENST00000414963 SLC39A3Q9BRY0 314 aa13.33□□□□□ -0.28
SF3B1-204ENST00000414963 GPR87Q9BY21 358 aa13.33□□□□□ -0.28
SF3B1-204ENST00000414963 CADM1Q9BY67 442 aaKnown RBP13.33□□□□□ -0.28
SF3B1-204ENST00000414963 MMADHCQ9H3L0 296 aaPredicted RBP13.33□□□□□ -0.28
SF3B1-204ENST00000414963 TPT1P8Q9HAU6 139 aa13.33□□□□□ -0.28
SF3B1-204ENST00000414963 C3orf14Q9HBI5 128 aa13.33□□□□□ -0.28
SF3B1-204ENST00000414963 SPAG4Q9NPE6 437 aa13.33□□□□□ -0.28
SF3B1-204ENST00000414963 ADAP2Q9NPF8 381 aa13.33□□□□□ -0.28
SF3B1-204ENST00000414963 MAT2BQ9NZL9 334 aa13.33□□□□□ -0.28
SF3B1-204ENST00000414963 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.33□□□□□ -0.28
SF3B1-204ENST00000414963 C3orf18Q9UK00 162 aa13.33□□□□□ -0.28
SF3B1-204ENST00000414963 WASF3Q9UPY6 502 aa13.33□□□□□ -0.28
SF3B1-204ENST00000414963 CLIC1O00299 241 aa13.32□□□□□ -0.28
SF3B1-204ENST00000414963 EMC8O43402 210 aa13.32□□□□□ -0.28
SF3B1-204ENST00000414963 RAD1O60671 282 aa13.32□□□□□ -0.28
SF3B1-204ENST00000414963 ALOX12BO75342 701 aa13.32□□□□□ -0.28
SF3B1-204ENST00000414963 KRT75O95678 551 aa13.32□□□□□ -0.28
SF3B1-204ENST00000414963 GPX2P18283 190 aa13.32□□□□□ -0.28
SF3B1-204ENST00000414963 S1PR1P21453 382 aa13.32□□□□□ -0.28
SF3B1-204ENST00000414963 NT5EP21589 574 aa13.32□□□□□ -0.28
SF3B1-204ENST00000414963 PRR5P85299 388 aa13.32□□□□□ -0.28
SF3B1-204ENST00000414963 ELAVL1Q15717 326 aaKnown RBP13.32□□□□□ -0.28
SF3B1-204ENST00000414963 DNAJC14Q6Y2X3 702 aaPredicted RBP13.32□□□□□ -0.28
SF3B1-204ENST00000414963 DGAT2L6Q6ZPD8 337 aa13.32□□□□□ -0.28
SF3B1-204ENST00000414963 ANKRD37Q7Z713 158 aa13.32□□□□□ -0.28
SF3B1-204ENST00000414963 PRSS58Q8IYP2 241 aa13.32□□□□□ -0.28
SF3B1-204ENST00000414963 ADCY4Q8NFM4 1077 aa13.32□□□□□ -0.28
SF3B1-204ENST00000414963 OR56A1Q8NGH5 318 aa13.32□□□□□ -0.28
SF3B1-204ENST00000414963 PTPMT1Q8WUK0 201 aaPredicted RBP13.32□□□□□ -0.28
SF3B1-204ENST00000414963 NACC2Q96BF6 587 aa13.32□□□□□ -0.28
SF3B1-204ENST00000414963 FAM120BQ96EK7 910 aaKnown RBP13.32□□□□□ -0.28
SF3B1-204ENST00000414963 CDRT15Q96T59 188 aa13.32□□□□□ -0.28
SF3B1-204ENST00000414963 SLC35A5Q9BS91 424 aa13.32□□□□□ -0.28
SF3B1-204ENST00000414963 CRB3Q9BUF7 120 aa13.32□□□□□ -0.28
SF3B1-204ENST00000414963 SOX17Q9H6I2 414 aaPredicted RBP13.32□□□□□ -0.28
SF3B1-204ENST00000414963 CMTM6Q9NX76 183 aa13.32□□□□□ -0.28
SF3B1-204ENST00000414963 C19orf53Q9UNZ5 99 aaPredicted RBP13.32□□□□□ -0.28
SF3B1-204ENST00000414963 CORO2BQ9UQ03 480 aa13.32□□□□□ -0.28
SF3B1-204ENST00000414963 FARSAQ9Y285 508 aaKnown RBP13.32□□□□□ -0.28
SF3B1-204ENST00000414963 PADI2Q9Y2J8 665 aa13.32□□□□□ -0.28
SF3B1-204ENST00000414963 SNX8Q9Y5X2 465 aa13.32□□□□□ -0.28
SF3B1-204ENST00000414963 NUP210LQ5VU65 1888 aa13.31□□□□□ -0.28
SF3B1-204ENST00000414963 LOC102723996A0A087X1L8 192 aa13.31□□□□□ -0.28
SF3B1-204ENST00000414963 RNF103-CHMP3A0A140T963 221 aa13.31□□□□□ -0.28
SF3B1-204ENST00000414963 MYOCOSA0A1B0GUC4 107 aa13.31□□□□□ -0.28
SF3B1-204ENST00000414963 A0A1W2PQ72 361 aa13.31□□□□□ -0.28
SF3B1-204ENST00000414963 EVPLLA8MZ36 301 aa13.31□□□□□ -0.28
SF3B1-204ENST00000414963 UPK1AO00322 258 aa13.31□□□□□ -0.28
SF3B1-204ENST00000414963 DNAJA2O60884 412 aa13.31□□□□□ -0.28
SF3B1-204ENST00000414963 PSMG1O95456 288 aa13.31□□□□□ -0.28
SF3B1-204ENST00000414963 IGHEP01854 428 aa13.31□□□□□ -0.28
SF3B1-204ENST00000414963 IFNA16P05015 189 aa13.31□□□□□ -0.28
SF3B1-204ENST00000414963 UMODP07911 640 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms