RNA–Protein interactions for RNA: ENST00000414057.6

SCAMP4-204, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 1 (best)

Gene SCAMP4, Length 1,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-204ENST00000414057 TSSK3Q96PN8 268 aa15.86■□□□□ 0.13
SCAMP4-204ENST00000414057 NPAS2Q99743 824 aa15.86■□□□□ 0.13
SCAMP4-204ENST00000414057 HOPXQ9BPY8 73 aaPredicted RBP15.86■□□□□ 0.13
SCAMP4-204ENST00000414057 ZNF700Q9H0M5 742 aa15.86■□□□□ 0.13
SCAMP4-204ENST00000414057 WDR41Q9HAD4 459 aa15.86■□□□□ 0.13
SCAMP4-204ENST00000414057 PTGFRNQ9P2B2 879 aa15.86■□□□□ 0.13
SCAMP4-204ENST00000414057 TEKT2Q9UIF3 430 aa15.86■□□□□ 0.13
SCAMP4-204ENST00000414057 COL12A1Q99715 3063 aa15.86■□□□□ 0.13
SCAMP4-204ENST00000414057 LRIT2A6NDA9 550 aa15.85■□□□□ 0.13
SCAMP4-204ENST00000414057 SEMA7AO75326 666 aa15.85■□□□□ 0.13
SCAMP4-204ENST00000414057 TBX6O95947 436 aaPredicted RBP15.85■□□□□ 0.13
SCAMP4-204ENST00000414057 DDX5P17844 614 aaKnown RBP15.85■□□□□ 0.13
SCAMP4-204ENST00000414057 IL10P22301 178 aa15.85■□□□□ 0.13
SCAMP4-204ENST00000414057 HPCAL1P37235 193 aa15.85■□□□□ 0.13
SCAMP4-204ENST00000414057 MAT1AQ00266 395 aaKnown RBP15.85■□□□□ 0.13
SCAMP4-204ENST00000414057 RGS1Q08116 209 aa15.85■□□□□ 0.13
SCAMP4-204ENST00000414057 SYT16Q17RD7 645 aa15.85■□□□□ 0.13
SCAMP4-204ENST00000414057 MINDY4Q4G0A6 757 aa15.85■□□□□ 0.13
SCAMP4-204ENST00000414057 TIGD2Q4W5G0 525 aa15.85■□□□□ 0.13
SCAMP4-204ENST00000414057 MFSD4BQ5TF39 518 aa15.85■□□□□ 0.13
SCAMP4-204ENST00000414057 RPUSD3Q6P087 351 aaKnown RBP15.85■□□□□ 0.13
SCAMP4-204ENST00000414057 ST6GALNAC3Q8NDV1 305 aa15.85■□□□□ 0.13
SCAMP4-204ENST00000414057 OR51Q1Q8NH59 317 aa15.85■□□□□ 0.13
SCAMP4-204ENST00000414057 BRIX1Q8TDN6 353 aaKnown RBP15.85■□□□□ 0.13
SCAMP4-204ENST00000414057 UTP4Q969X6 686 aaKnown RBP15.85■□□□□ 0.13
SCAMP4-204ENST00000414057 MTERF3Q96E29 417 aa15.85■□□□□ 0.13
SCAMP4-204ENST00000414057 PRPF18Q99633 342 aaKnown RBP15.85■□□□□ 0.13
SCAMP4-204ENST00000414057 REXO4Q9GZR2 422 aaKnown RBP15.85■□□□□ 0.13
SCAMP4-204ENST00000414057 MYNNQ9NPC7 610 aa15.85■□□□□ 0.13
SCAMP4-204ENST00000414057 BAIAP2L1Q9UHR4 511 aa15.85■□□□□ 0.13
SCAMP4-204ENST00000414057 MRPS2Q9Y399 296 aaKnown RBP15.85■□□□□ 0.13
SCAMP4-204ENST00000414057 CSAG2Q9Y5P2 127 aa15.85■□□□□ 0.13
SCAMP4-204ENST00000414057 SLC22A7Q9Y694 548 aa15.85■□□□□ 0.13
SCAMP4-204ENST00000414057 NUP210LQ5VU65 1888 aa15.85■□□□□ 0.13
SCAMP4-204ENST00000414057 HECTD1Q9ULT8 2610 aa15.85■□□□□ 0.13
SCAMP4-204ENST00000414057 URADA6NGE7 173 aa15.84■□□□□ 0.13
SCAMP4-204ENST00000414057 PLPP1O14494 284 aa15.84■□□□□ 0.13
SCAMP4-204ENST00000414057 KLHL18O94889 574 aa15.84■□□□□ 0.13
SCAMP4-204ENST00000414057 PGRP06401 933 aa15.84■□□□□ 0.13
SCAMP4-204ENST00000414057 TACR1P25103 407 aa15.84■□□□□ 0.13
SCAMP4-204ENST00000414057 HNRNPFP52597 415 aaKnown RBP15.84■□□□□ 0.13
SCAMP4-204ENST00000414057 TRA2BP62995 288 aaKnown RBP15.84■□□□□ 0.13
SCAMP4-204ENST00000414057 LRRC74AQ0VAA2 488 aa15.84■□□□□ 0.13
SCAMP4-204ENST00000414057 TRMT5Q32P41 509 aaKnown RBP15.84■□□□□ 0.13
SCAMP4-204ENST00000414057 FAM174BQ3ZCQ3 159 aa15.84■□□□□ 0.13
SCAMP4-204ENST00000414057 SPATS1Q496A3 300 aa15.84■□□□□ 0.13
SCAMP4-204ENST00000414057 FAM180AQ6UWF9 173 aa15.84■□□□□ 0.13
SCAMP4-204ENST00000414057 BNC2Q6ZN30 1099 aaPredicted RBP15.84■□□□□ 0.13
SCAMP4-204ENST00000414057 R3HCC1LQ7Z5L2 792 aaKnown RBP15.84■□□□□ 0.13
SCAMP4-204ENST00000414057 CAMKMTQ7Z624 323 aa15.84■□□□□ 0.13
SCAMP4-204ENST00000414057 SCUBE1Q8IWY4 988 aa15.84■□□□□ 0.13
SCAMP4-204ENST00000414057 NT5CQ8TCD5 201 aa15.84■□□□□ 0.13
SCAMP4-204ENST00000414057 HAS2Q92819 552 aa15.84■□□□□ 0.13
SCAMP4-204ENST00000414057 MESP1Q9BRJ9 268 aa15.84■□□□□ 0.13
SCAMP4-204ENST00000414057 THTPAQ9BU02 230 aa15.84■□□□□ 0.13
SCAMP4-204ENST00000414057 EBPLQ9BY08 206 aa15.84■□□□□ 0.13
SCAMP4-204ENST00000414057 RMND5AQ9H871 391 aa15.84■□□□□ 0.13
SCAMP4-204ENST00000414057 PLEKHB1Q9UF11 243 aaPredicted RBP15.84■□□□□ 0.13
SCAMP4-204ENST00000414057 SLC5A6Q9Y289 635 aa15.84■□□□□ 0.13
SCAMP4-204ENST00000414057 C15orf38-AP3S2A0A0A6YYH1 394 aa15.84■□□□□ 0.13
SCAMP4-204ENST00000414057 TRAV17A0A0B4J275 112 aa15.84■□□□□ 0.13
SCAMP4-204ENST00000414057 ARHGAP10A1A4S6 786 aa15.84■□□□□ 0.13
SCAMP4-204ENST00000414057 CYSRT1A8MQ03 144 aa15.84■□□□□ 0.13
SCAMP4-204ENST00000414057 SH3BGRLO75368 114 aa15.84■□□□□ 0.13
SCAMP4-204ENST00000414057 EDN3P14138 238 aa15.84■□□□□ 0.13
SCAMP4-204ENST00000414057 IL1RNP18510 177 aa15.84■□□□□ 0.13
SCAMP4-204ENST00000414057 S100A3P33764 101 aa15.84■□□□□ 0.13
SCAMP4-204ENST00000414057 BSGP35613 385 aa15.84■□□□□ 0.13
SCAMP4-204ENST00000414057 SOX11P35716 441 aa15.84■□□□□ 0.13
SCAMP4-204ENST00000414057 XCR1P46094 333 aa15.84■□□□□ 0.13
SCAMP4-204ENST00000414057 PCOLCEQ15113 449 aa15.84■□□□□ 0.13
SCAMP4-204ENST00000414057 C8orf82Q6P1X6 216 aaPredicted RBP15.84■□□□□ 0.13
SCAMP4-204ENST00000414057 TRIM40Q6P9F5 258 aa15.84■□□□□ 0.13
SCAMP4-204ENST00000414057 ARPINQ7Z6K5 226 aa15.84■□□□□ 0.13
SCAMP4-204ENST00000414057 RETREG3Q86VR2 466 aa15.84■□□□□ 0.13
SCAMP4-204ENST00000414057 ULK2Q8IYT8 1036 aa15.84■□□□□ 0.13
SCAMP4-204ENST00000414057 KRTCAP2Q8N6L1 136 aa15.84■□□□□ 0.13
SCAMP4-204ENST00000414057 OR2L5Q8NG80 312 aa15.84■□□□□ 0.13
SCAMP4-204ENST00000414057 OR8J2Q8NGG1 315 aa15.84■□□□□ 0.13
SCAMP4-204ENST00000414057 OR1N1Q8NGS0 311 aa15.84■□□□□ 0.13
SCAMP4-204ENST00000414057 CLHC1Q8NHS4 586 aa15.84■□□□□ 0.13
SCAMP4-204ENST00000414057 SUN3Q8TAQ9 357 aa15.84■□□□□ 0.13
SCAMP4-204ENST00000414057 PUM2Q8TB72 1066 aaKnown RBP eCLIP15.84■□□□□ 0.13
SCAMP4-204ENST00000414057 ZCCHC10Q8TBK6 192 aa15.84■□□□□ 0.13
SCAMP4-204ENST00000414057 FAR1Q8WVX9 515 aa15.84■□□□□ 0.13
SCAMP4-204ENST00000414057 VPS33AQ96AX1 596 aa15.84■□□□□ 0.13
SCAMP4-204ENST00000414057 C5orf34Q96MH7 638 aa15.84■□□□□ 0.13
SCAMP4-204ENST00000414057 KCNC2Q96PR1 638 aa15.84■□□□□ 0.13
SCAMP4-204ENST00000414057 F2RL3Q96RI0 385 aa15.84■□□□□ 0.13
SCAMP4-204ENST00000414057 TBCDQ9BTW9 1192 aa15.84■□□□□ 0.13
SCAMP4-204ENST00000414057 SLC6A16Q9GZN6 736 aa15.84■□□□□ 0.13
SCAMP4-204ENST00000414057 ROGDIQ9GZN7 287 aa15.84■□□□□ 0.13
SCAMP4-204ENST00000414057 VN1R1Q9GZP7 353 aa15.84■□□□□ 0.13
SCAMP4-204ENST00000414057 DDX31Q9H8H2 851 aaKnown RBP15.84■□□□□ 0.13
SCAMP4-204ENST00000414057 SPAG4Q9NPE6 437 aa15.84■□□□□ 0.13
SCAMP4-204ENST00000414057 ASPDHA6ND91 283 aa15.83■□□□□ 0.12
SCAMP4-204ENST00000414057 SGK494L7N484 410 aa15.83■□□□□ 0.12
SCAMP4-204ENST00000414057 SCAMP2O15127 329 aaKnown RBP15.83■□□□□ 0.12
SCAMP4-204ENST00000414057 STATHP02808 62 aa15.83■□□□□ 0.12
SCAMP4-204ENST00000414057 SERPIND1P05546 499 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms