RNA–Protein interactions for RNA: ENST00000413872.6

PHRF1-202, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-202ENST00000413872 PRSS56P0CW18 603 aa16.47■□□□□ 0.23
PHRF1-202ENST00000413872 PRKACGP22612 351 aa16.47■□□□□ 0.23
PHRF1-202ENST00000413872 ARF5P84085 180 aa16.47■□□□□ 0.23
PHRF1-202ENST00000413872 MGAT3Q09327 533 aa16.47■□□□□ 0.23
PHRF1-202ENST00000413872 SLC35F1Q5T1Q4 408 aa16.47■□□□□ 0.23
PHRF1-202ENST00000413872 TUBA3EQ6PEY2 450 aa16.47■□□□□ 0.23
PHRF1-202ENST00000413872 ZNF548Q8NEK5 533 aaPredicted RBP16.47■□□□□ 0.23
PHRF1-202ENST00000413872 OR8J1Q8NGP2 316 aa16.47■□□□□ 0.23
PHRF1-202ENST00000413872 ARRDC2Q8TBH0 407 aa16.47■□□□□ 0.23
PHRF1-202ENST00000413872 THAP3Q8WTV1 239 aaPredicted RBP16.47■□□□□ 0.23
PHRF1-202ENST00000413872 HDAC2Q92769 488 aaKnown RBP16.47■□□□□ 0.23
PHRF1-202ENST00000413872 OR1F2PQ96R84 312 aa16.47■□□□□ 0.23
PHRF1-202ENST00000413872 ADORA3P0DMS8 318 aa16.46■□□□□ 0.23
PHRF1-202ENST00000413872 PRLHRP49683 370 aa16.46■□□□□ 0.23
PHRF1-202ENST00000413872 RAB15P59190 212 aa16.46■□□□□ 0.23
PHRF1-202ENST00000413872 FGL2Q14314 439 aa16.46■□□□□ 0.23
PHRF1-202ENST00000413872 SPPL3Q8TCT6 385 aa16.46■□□□□ 0.23
PHRF1-202ENST00000413872 DIO2Q92813 273 aa16.46■□□□□ 0.23
PHRF1-202ENST00000413872 HSPA12BQ96MM6 686 aa16.46■□□□□ 0.23
PHRF1-202ENST00000413872 DNAJC27Q9NZQ0 273 aa16.46■□□□□ 0.23
PHRF1-202ENST00000413872 GXYLT2A0PJZ3 443 aa16.46■□□□□ 0.23
PHRF1-202ENST00000413872 PRSS38A1L453 326 aa16.46■□□□□ 0.23
PHRF1-202ENST00000413872 GRXCR2A6NFK2 248 aa16.46■□□□□ 0.23
PHRF1-202ENST00000413872 EIF1AYO14602 144 aaKnown RBP16.46■□□□□ 0.23
PHRF1-202ENST00000413872 KIAA0355O15063 1070 aa16.46■□□□□ 0.23
PHRF1-202ENST00000413872 LATO43561 262 aa16.46■□□□□ 0.23
PHRF1-202ENST00000413872 MAGP20916 626 aa16.46■□□□□ 0.23
PHRF1-202ENST00000413872 OTX2P32243 289 aa16.46■□□□□ 0.23
PHRF1-202ENST00000413872 TDGQ13569 410 aa16.46■□□□□ 0.23
PHRF1-202ENST00000413872 KIAA0895LQ68EN5 471 aa16.46■□□□□ 0.23
PHRF1-202ENST00000413872 THOC7Q6I9Y2 204 aaKnown RBP16.46■□□□□ 0.23
PHRF1-202ENST00000413872 ZNF773Q6PK81 442 aa16.46■□□□□ 0.23
PHRF1-202ENST00000413872 TMPPEQ6ZT21 453 aa16.46■□□□□ 0.23
PHRF1-202ENST00000413872 MGAT4AQ9UM21 535 aa16.46■□□□□ 0.23
PHRF1-202ENST00000413872 LINC01553A4QN01 128 aa16.46■□□□□ 0.23
PHRF1-202ENST00000413872 ABCB7O75027 752 aa16.46■□□□□ 0.23
PHRF1-202ENST00000413872 TRA2BP62995 288 aaKnown RBP16.46■□□□□ 0.23
PHRF1-202ENST00000413872 EIF5AP63241 154 aaKnown RBP16.46■□□□□ 0.23
PHRF1-202ENST00000413872 NNATQ16517 81 aa16.46■□□□□ 0.23
PHRF1-202ENST00000413872 TMEM151BQ8IW70 566 aa16.46■□□□□ 0.23
PHRF1-202ENST00000413872 ARMC10Q8N2F6 343 aa16.46■□□□□ 0.23
PHRF1-202ENST00000413872 LHX3Q9UBR4 397 aa16.46■□□□□ 0.23
PHRF1-202ENST00000413872 AP1M2Q9Y6Q5 423 aa16.46■□□□□ 0.23
PHRF1-202ENST00000413872 A0A1B0GVT2 93 aa16.46■□□□□ 0.22
PHRF1-202ENST00000413872 FOLR3P41439 243 aa16.46■□□□□ 0.22
PHRF1-202ENST00000413872 SLC6A11P48066 632 aa16.46■□□□□ 0.22
PHRF1-202ENST00000413872 CDKL1Q00532 357 aa16.46■□□□□ 0.22
PHRF1-202ENST00000413872 FAM69BQ5VUD6 431 aa16.46■□□□□ 0.22
PHRF1-202ENST00000413872 ANKRD54Q6NXT1 300 aa16.46■□□□□ 0.22
PHRF1-202ENST00000413872 HEBP1Q9NRV9 189 aa16.46■□□□□ 0.22
PHRF1-202ENST00000413872 ANHXE9PGG2 379 aa16.45■□□□□ 0.22
PHRF1-202ENST00000413872 C11orf98E9PRG8 122 aa16.45■□□□□ 0.22
PHRF1-202ENST00000413872 HSD17B1P14061 328 aa16.45■□□□□ 0.22
PHRF1-202ENST00000413872 SEC23BQ15437 767 aa16.45■□□□□ 0.22
PHRF1-202ENST00000413872 LRIT3Q3SXY7 679 aa16.45■□□□□ 0.22
PHRF1-202ENST00000413872 CRB3Q9BUF7 120 aa16.45■□□□□ 0.22
PHRF1-202ENST00000413872 TMED9Q9BVK6 235 aa16.45■□□□□ 0.22
PHRF1-202ENST00000413872 ZBTB20Q9HC78 741 aaPredicted RBP16.45■□□□□ 0.22
PHRF1-202ENST00000413872 BTNL2Q9UIR0 455 aa16.45■□□□□ 0.22
PHRF1-202ENST00000413872 C17orf113A0A1B0GUU1 675 aa16.45■□□□□ 0.22
PHRF1-202ENST00000413872 G3V2L1 256 aa16.45■□□□□ 0.22
PHRF1-202ENST00000413872 RPS17P08708 135 aaKnown RBP16.45■□□□□ 0.22
PHRF1-202ENST00000413872 FOXK1P85037 733 aa16.45■□□□□ 0.22
PHRF1-202ENST00000413872 ASB18Q6ZVZ8 466 aa16.45■□□□□ 0.22
PHRF1-202ENST00000413872 PDSS2Q86YH6 399 aa16.45■□□□□ 0.22
PHRF1-202ENST00000413872 CNTN4Q8IWV2 1026 aa16.45■□□□□ 0.22
PHRF1-202ENST00000413872 MINDY2Q8NBR6 621 aa16.45■□□□□ 0.22
PHRF1-202ENST00000413872 MROQ9BYG7 248 aa16.45■□□□□ 0.22
PHRF1-202ENST00000413872 NANSQ9NR45 359 aa16.45■□□□□ 0.22
PHRF1-202ENST00000413872 POT1Q9NUX5 634 aa16.45■□□□□ 0.22
PHRF1-202ENST00000413872 NHSQ6T4R5 1651 aa16.45■□□□□ 0.22
PHRF1-202ENST00000413872 ZNF878C9JN71 531 aa16.45■□□□□ 0.22
PHRF1-202ENST00000413872 ABLIM3O94929 683 aa16.45■□□□□ 0.22
PHRF1-202ENST00000413872 SCRN3Q0VDG4 424 aa16.45■□□□□ 0.22
PHRF1-202ENST00000413872 C6orf89Q6UWU4 347 aa16.45■□□□□ 0.22
PHRF1-202ENST00000413872 MAMDC2Q7Z304 686 aaPredicted RBP16.45■□□□□ 0.22
PHRF1-202ENST00000413872 PIANPQ8IYJ0 282 aa16.45■□□□□ 0.22
PHRF1-202ENST00000413872 THAP4Q8WY91 577 aa16.45■□□□□ 0.22
PHRF1-202ENST00000413872 DMRT3Q9NQL9 472 aa16.45■□□□□ 0.22
PHRF1-202ENST00000413872 WASF3Q9UPY6 502 aa16.45■□□□□ 0.22
PHRF1-202ENST00000413872 SLC22A31A6NKX4 558 aa16.45■□□□□ 0.22
PHRF1-202ENST00000413872 A8MVJ9 347 aa16.45■□□□□ 0.22
PHRF1-202ENST00000413872 HTRA2O43464 458 aaPredicted RBP16.45■□□□□ 0.22
PHRF1-202ENST00000413872 SPARCP09486 303 aa16.45■□□□□ 0.22
PHRF1-202ENST00000413872 H2BFMP0C1H6 154 aa16.45■□□□□ 0.22
PHRF1-202ENST00000413872 CCNOP22674 350 aa16.45■□□□□ 0.22
PHRF1-202ENST00000413872 EXOC3L2Q2M3D2 409 aa16.45■□□□□ 0.22
PHRF1-202ENST00000413872 DEFB133Q30KQ1 61 aa16.45■□□□□ 0.22
PHRF1-202ENST00000413872 PLCZ1Q86YW0 608 aa16.45■□□□□ 0.22
PHRF1-202ENST00000413872 OR52E1Q8NGJ3 308 aa16.45■□□□□ 0.22
PHRF1-202ENST00000413872 NTMT1Q9BV86 223 aa16.45■□□□□ 0.22
PHRF1-202ENST00000413872 HPF1Q9NWY4 346 aa16.45■□□□□ 0.22
PHRF1-202ENST00000413872 GLI3P10071 1580 aa16.45■□□□□ 0.22
PHRF1-202ENST00000413872 CIB4A0PJX0 185 aa16.44■□□□□ 0.22
PHRF1-202ENST00000413872 SLC2A2P11168 524 aaPredicted RBP16.44■□□□□ 0.22
PHRF1-202ENST00000413872 NDUFV2P19404 249 aa16.44■□□□□ 0.22
PHRF1-202ENST00000413872 GCGRP47871 477 aa16.44■□□□□ 0.22
PHRF1-202ENST00000413872 MLLT1Q03111 559 aaPredicted RBP16.44■□□□□ 0.22
PHRF1-202ENST00000413872 GK3PQ14409 553 aa16.44■□□□□ 0.22
PHRF1-202ENST00000413872 GLT8D1Q68CQ7 371 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms