RNA–Protein interactions for RNA: ENST00000413040.6

NUB1-201, Transcript of negative regulator of ubiquitin like proteins 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NUB1, Length 3,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUB1-201ENST00000413040 P2RX2Q9UBL9 471 aa13.09□□□□□ -0.31
NUB1-201ENST00000413040 MGAT4BQ9UQ53 548 aa13.09□□□□□ -0.31
NUB1-201ENST00000413040 GPR52Q9Y2T5 361 aa13.09□□□□□ -0.31
NUB1-201ENST00000413040 KLK4Q9Y5K2 254 aa13.09□□□□□ -0.31
NUB1-201ENST00000413040 SCN2AQ99250 2005 aa13.08□□□□□ -0.31
NUB1-201ENST00000413040 SH3D21A4FU49 640 aa13.08□□□□□ -0.32
NUB1-201ENST00000413040 RFXAPO00287 272 aa13.08□□□□□ -0.32
NUB1-201ENST00000413040 ERI3O43414 337 aaKnown RBP13.08□□□□□ -0.32
NUB1-201ENST00000413040 LIMS1P48059 325 aa13.08□□□□□ -0.32
NUB1-201ENST00000413040 CDK3Q00526 305 aa13.08□□□□□ -0.32
NUB1-201ENST00000413040 SELENBP1Q13228 472 aa13.08□□□□□ -0.32
NUB1-201ENST00000413040 ELOAQ14241 798 aaKnown RBP13.08□□□□□ -0.32
NUB1-201ENST00000413040 KCNJ8Q15842 424 aa13.08□□□□□ -0.32
NUB1-201ENST00000413040 WSCD2Q2TBF2 565 aa13.08□□□□□ -0.32
NUB1-201ENST00000413040 PODNL1Q6PEZ8 512 aa13.08□□□□□ -0.32
NUB1-201ENST00000413040 RRM2BQ7LG56 351 aa13.08□□□□□ -0.32
NUB1-201ENST00000413040 UBE2J2Q8N2K1 259 aa13.08□□□□□ -0.32
NUB1-201ENST00000413040 OR4K5Q8NGD3 323 aa13.08□□□□□ -0.32
NUB1-201ENST00000413040 TMEM80Q96HE8 168 aa13.08□□□□□ -0.32
NUB1-201ENST00000413040 ZNF354BQ96LW1 612 aa13.08□□□□□ -0.32
NUB1-201ENST00000413040 OPALINQ96PE5 141 aa13.08□□□□□ -0.32
NUB1-201ENST00000413040 CERS4Q9HA82 394 aa13.08□□□□□ -0.32
NUB1-201ENST00000413040 SIRT3Q9NTG7 399 aaPredicted RBP13.08□□□□□ -0.32
NUB1-201ENST00000413040 SLC13A4Q9UKG4 626 aa13.08□□□□□ -0.32
NUB1-201ENST00000413040 WDR37Q9Y2I8 494 aa13.08□□□□□ -0.32
NUB1-201ENST00000413040 PLXNA2O75051 1894 aa13.08□□□□□ -0.32
NUB1-201ENST00000413040 TFECO14948 347 aaPredicted RBP13.08□□□□□ -0.32
NUB1-201ENST00000413040 CSO75390 466 aaKnown RBP13.08□□□□□ -0.32
NUB1-201ENST00000413040 CH25HO95992 272 aa13.08□□□□□ -0.32
NUB1-201ENST00000413040 RPN2P04844 631 aa13.08□□□□□ -0.32
NUB1-201ENST00000413040 HOXB3P14651 431 aaPredicted RBP13.08□□□□□ -0.32
NUB1-201ENST00000413040 CD72P21854 359 aa13.08□□□□□ -0.32
NUB1-201ENST00000413040 RPS19P39019 145 aaKnown RBP13.08□□□□□ -0.32
NUB1-201ENST00000413040 MAGEA8P43361 318 aa13.08□□□□□ -0.32
NUB1-201ENST00000413040 KCNJ5P48544 419 aa13.08□□□□□ -0.32
NUB1-201ENST00000413040 C1DQ13901 141 aaKnown RBP13.08□□□□□ -0.32
NUB1-201ENST00000413040 ATAD3BQ5T9A4 648 aa13.08□□□□□ -0.32
NUB1-201ENST00000413040 TYW3Q6IPR3 259 aaKnown RBP13.08□□□□□ -0.32
NUB1-201ENST00000413040 PGBD2Q6P3X8 592 aa13.08□□□□□ -0.32
NUB1-201ENST00000413040 OR5K2Q8NHB8 316 aa13.08□□□□□ -0.32
NUB1-201ENST00000413040 COL26A1Q96A83 441 aa13.08□□□□□ -0.32
NUB1-201ENST00000413040 GLIPR2Q9H4G4 154 aa13.08□□□□□ -0.32
NUB1-201ENST00000413040 SERHL2Q9H4I8 314 aa13.08□□□□□ -0.32
NUB1-201ENST00000413040 KLHL31Q9H511 634 aa13.08□□□□□ -0.32
NUB1-201ENST00000413040 TIGARQ9NQ88 270 aa13.08□□□□□ -0.32
NUB1-201ENST00000413040 PLEKHM1Q9Y4G2 1056 aa13.08□□□□□ -0.32
NUB1-201ENST00000413040 ISPDA4D126 451 aa13.08□□□□□ -0.32
NUB1-201ENST00000413040 TMEM221A6NGB7 291 aa13.08□□□□□ -0.32
NUB1-201ENST00000413040 E9PQ18 207 aa13.08□□□□□ -0.32
NUB1-201ENST00000413040 LRRTM2O43300 516 aa13.08□□□□□ -0.32
NUB1-201ENST00000413040 TNFSF8P32971 234 aa13.08□□□□□ -0.32
NUB1-201ENST00000413040 PXNP49023 591 aaPredicted RBP13.08□□□□□ -0.32
NUB1-201ENST00000413040 HOXC5Q00444 222 aa13.08□□□□□ -0.32
NUB1-201ENST00000413040 RSBN1Q5VWQ0 802 aaPredicted RBP13.08□□□□□ -0.32
NUB1-201ENST00000413040 ZNF770Q6IQ21 691 aaPredicted RBP13.08□□□□□ -0.32
NUB1-201ENST00000413040 Q8N9G6 341 aaPredicted RBP13.08□□□□□ -0.32
NUB1-201ENST00000413040 OR6T1Q8NGN1 323 aa13.08□□□□□ -0.32
NUB1-201ENST00000413040 LRR1Q96L50 414 aa13.08□□□□□ -0.32
NUB1-201ENST00000413040 SLC30A2Q9BRI3 323 aa13.08□□□□□ -0.32
NUB1-201ENST00000413040 CDCA4Q9BXL8 241 aa13.08□□□□□ -0.32
NUB1-201ENST00000413040 CPNE5Q9HCH3 593 aa13.08□□□□□ -0.32
NUB1-201ENST00000413040 HHATLQ9HCP6 504 aa13.08□□□□□ -0.32
NUB1-201ENST00000413040 MBNL1Q9NR56 388 aaKnown RBP13.08□□□□□ -0.32
NUB1-201ENST00000413040 CNOT2Q9NZN8 540 aaKnown RBP13.08□□□□□ -0.32
NUB1-201ENST00000413040 ICKQ9UPZ9 632 aa13.08□□□□□ -0.32
NUB1-201ENST00000413040 SLC9A8Q9Y2E8 581 aa13.08□□□□□ -0.32
NUB1-201ENST00000413040 A0A1W2PS29 197 aa13.07□□□□□ -0.32
NUB1-201ENST00000413040 FAAHO00519 579 aa13.07□□□□□ -0.32
NUB1-201ENST00000413040 MID1O15344 667 aa13.07□□□□□ -0.32
NUB1-201ENST00000413040 PRKYO43930 277 aa13.07□□□□□ -0.32
NUB1-201ENST00000413040 NFATC1O95644 943 aa13.07□□□□□ -0.32
NUB1-201ENST00000413040 MAT2AP31153 395 aaKnown RBP13.07□□□□□ -0.32
NUB1-201ENST00000413040 SLC15A1P46059 708 aa13.07□□□□□ -0.32
NUB1-201ENST00000413040 MAP4K2Q12851 820 aa13.07□□□□□ -0.32
NUB1-201ENST00000413040 ILKQ13418 452 aa13.07□□□□□ -0.32
NUB1-201ENST00000413040 IRF3Q14653 427 aa13.07□□□□□ -0.32
NUB1-201ENST00000413040 GET4Q7L5D6 327 aaPredicted RBP13.07□□□□□ -0.32
NUB1-201ENST00000413040 COMTD1Q86VU5 262 aa13.07□□□□□ -0.32
NUB1-201ENST00000413040 SLC30A8Q8IWU4 369 aa13.07□□□□□ -0.32
NUB1-201ENST00000413040 LINC01555Q8NAE3 123 aa13.07□□□□□ -0.32
NUB1-201ENST00000413040 TMEM145Q8NBT3 493 aa13.07□□□□□ -0.32
NUB1-201ENST00000413040 TMIEQ8NEW7 156 aa13.07□□□□□ -0.32
NUB1-201ENST00000413040 OR8J1Q8NGP2 316 aa13.07□□□□□ -0.32
NUB1-201ENST00000413040 HCAR2Q8TDS4 363 aa13.07□□□□□ -0.32
NUB1-201ENST00000413040 DOK4Q8TEW6 326 aa13.07□□□□□ -0.32
NUB1-201ENST00000413040 LINC00615Q96LM1 132 aaPredicted RBP13.07□□□□□ -0.32
NUB1-201ENST00000413040 PSD2Q9BQI7 771 aa13.07□□□□□ -0.32
NUB1-201ENST00000413040 REV1Q9UBZ9 1251 aa13.07□□□□□ -0.32
NUB1-201ENST00000413040 RPL36Q9Y3U8 105 aaKnown RBP13.07□□□□□ -0.32
NUB1-201ENST00000413040 LRRK1Q38SD2 2015 aa13.07□□□□□ -0.32
NUB1-201ENST00000413040 TRBV23OR9-2A0A075B6M9 112 aa13.07□□□□□ -0.32
NUB1-201ENST00000413040 PRAMEF27A3QJZ7 478 aa13.07□□□□□ -0.32
NUB1-201ENST00000413040 HAT1O14929 419 aa13.07□□□□□ -0.32
NUB1-201ENST00000413040 PGRMC2O15173 223 aa13.07□□□□□ -0.32
NUB1-201ENST00000413040 CDRT1O95170 752 aa13.07□□□□□ -0.32
NUB1-201ENST00000413040 NTN1O95631 604 aa13.07□□□□□ -0.32
NUB1-201ENST00000413040 MYOGP15173 224 aa13.07□□□□□ -0.32
NUB1-201ENST00000413040 NTSP30990 170 aa13.07□□□□□ -0.32
NUB1-201ENST00000413040 CSTF2P33240 577 aaKnown RBP eCLIP13.07□□□□□ -0.32
NUB1-201ENST00000413040 NR4A2P43354 598 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms