RNA–Protein interactions for RNA: ENST00000411973.3

TRAPPC12-203, Transcript of trafficking protein particle complex 12, humanhuman

TSL 5

Gene TRAPPC12, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-203ENST00000411973 SOWAHCQ53LP3 525 aaPredicted RBP14.36□□□□□ -0.11
TRAPPC12-203ENST00000411973 ACER2Q5QJU3 275 aa14.36□□□□□ -0.11
TRAPPC12-203ENST00000411973 B3GNTL1Q67FW5 361 aaPredicted RBP14.36□□□□□ -0.11
TRAPPC12-203ENST00000411973 FAM180BQ6P0A1 224 aa14.36□□□□□ -0.11
TRAPPC12-203ENST00000411973 EPGNQ6UW88 154 aa14.36□□□□□ -0.11
TRAPPC12-203ENST00000411973 HSDL2Q6YN16 418 aa14.36□□□□□ -0.11
TRAPPC12-203ENST00000411973 FAM47EQ6ZV65 393 aa14.36□□□□□ -0.11
TRAPPC12-203ENST00000411973 R3HCC1LQ7Z5L2 792 aaKnown RBP14.36□□□□□ -0.11
TRAPPC12-203ENST00000411973 RIMKLAQ8IXN7 391 aa14.36□□□□□ -0.11
TRAPPC12-203ENST00000411973 CCDC116Q8IYX3 515 aa14.36□□□□□ -0.11
TRAPPC12-203ENST00000411973 FAM9CQ8IZT9 166 aa14.36□□□□□ -0.11
TRAPPC12-203ENST00000411973 OR7G1Q8NGA0 311 aa14.36□□□□□ -0.11
TRAPPC12-203ENST00000411973 CLHC1Q8NHS4 586 aa14.36□□□□□ -0.11
TRAPPC12-203ENST00000411973 SUN3Q8TAQ9 357 aa14.36□□□□□ -0.11
TRAPPC12-203ENST00000411973 ZNF675Q8TD23 568 aa14.36□□□□□ -0.11
TRAPPC12-203ENST00000411973 TM9SF4Q92544 642 aa14.36□□□□□ -0.11
TRAPPC12-203ENST00000411973 GFM2Q969S9 779 aaKnown RBP14.36□□□□□ -0.11
TRAPPC12-203ENST00000411973 CTHRC1Q96CG8 243 aa14.36□□□□□ -0.11
TRAPPC12-203ENST00000411973 ERP27Q96DN0 273 aa14.36□□□□□ -0.11
TRAPPC12-203ENST00000411973 NPAS2Q99743 824 aa14.36□□□□□ -0.11
TRAPPC12-203ENST00000411973 RNF32Q9H0A6 362 aa14.36□□□□□ -0.11
TRAPPC12-203ENST00000411973 CCDC134Q9H6E4 229 aa14.36□□□□□ -0.11
TRAPPC12-203ENST00000411973 WDR55Q9H6Y2 383 aaPredicted RBP14.36□□□□□ -0.11
TRAPPC12-203ENST00000411973 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.36□□□□□ -0.112e-7■□□□□ 8.3
TRAPPC12-203ENST00000411973 MAT2BQ9NZL9 334 aa14.36□□□□□ -0.11
TRAPPC12-203ENST00000411973 COPS7AQ9UBW8 275 aa14.36□□□□□ -0.11
TRAPPC12-203ENST00000411973 ATP6V1HQ9UI12 483 aa14.36□□□□□ -0.11
TRAPPC12-203ENST00000411973 MAPRE3Q9UPY8 281 aa14.36□□□□□ -0.11
TRAPPC12-203ENST00000411973 GABRR3A8MPY1 467 aa14.35□□□□□ -0.11
TRAPPC12-203ENST00000411973 HRKO00198 91 aa14.35□□□□□ -0.11
TRAPPC12-203ENST00000411973 SCAMP2O15127 329 aaKnown RBP14.35□□□□□ -0.11
TRAPPC12-203ENST00000411973 AKAP10O43572 662 aa14.35□□□□□ -0.11
TRAPPC12-203ENST00000411973 DPM1O60762 260 aa14.35□□□□□ -0.11
TRAPPC12-203ENST00000411973 EDF1O60869 148 aaKnown RBP14.35□□□□□ -0.11
TRAPPC12-203ENST00000411973 LRATO95237 230 aa14.35□□□□□ -0.11
TRAPPC12-203ENST00000411973 CT62P0C5K7 136 aa14.35□□□□□ -0.11
TRAPPC12-203ENST00000411973 S1PR1P21453 382 aa14.35□□□□□ -0.11
TRAPPC12-203ENST00000411973 NT5EP21589 574 aa14.35□□□□□ -0.11
TRAPPC12-203ENST00000411973 SOX18P35713 384 aa14.35□□□□□ -0.11
TRAPPC12-203ENST00000411973 HPCAL1P37235 193 aa14.35□□□□□ -0.11
TRAPPC12-203ENST00000411973 CLDN8P56748 225 aa14.35□□□□□ -0.11
TRAPPC12-203ENST00000411973 RNF4P78317 190 aa14.35□□□□□ -0.11
TRAPPC12-203ENST00000411973 C6orf163Q5TEZ5 329 aa14.35□□□□□ -0.11
TRAPPC12-203ENST00000411973 ABHD17BQ5VST6 288 aa14.35□□□□□ -0.11
TRAPPC12-203ENST00000411973 LINC00696Q6ZRV3 163 aa14.35□□□□□ -0.11
TRAPPC12-203ENST00000411973 SPATA19Q7Z5L4 167 aa14.35□□□□□ -0.11
TRAPPC12-203ENST00000411973 RPS19BP1Q86WX3 136 aaKnown RBP14.35□□□□□ -0.11
TRAPPC12-203ENST00000411973 HAS2Q92819 552 aa14.35□□□□□ -0.11
TRAPPC12-203ENST00000411973 PPCDCQ96CD2 204 aa14.35□□□□□ -0.11
TRAPPC12-203ENST00000411973 BBS4Q96RK4 519 aa14.35□□□□□ -0.11
TRAPPC12-203ENST00000411973 CNPPD1Q9BV87 410 aa14.35□□□□□ -0.11
TRAPPC12-203ENST00000411973 EPS8L2Q9H6S3 715 aa14.35□□□□□ -0.11
TRAPPC12-203ENST00000411973 STMN3Q9NZ72 180 aa14.35□□□□□ -0.11
TRAPPC12-203ENST00000411973 ZNF639Q9UID6 485 aa14.35□□□□□ -0.11
TRAPPC12-203ENST00000411973 ERVK-19Q9WJR5 959 aa14.35□□□□□ -0.11
TRAPPC12-203ENST00000411973 GOLGA8QA0A0J9YX86 632 aa14.34□□□□□ -0.11
TRAPPC12-203ENST00000411973 GOLGA8OA6NCC3 632 aa14.34□□□□□ -0.11
TRAPPC12-203ENST00000411973 TMEM200CA6NKL6 621 aa14.34□□□□□ -0.11
TRAPPC12-203ENST00000411973 OR6C76A6NM76 312 aa14.34□□□□□ -0.11
TRAPPC12-203ENST00000411973 TCP11X1B4DZS4 312 aa14.34□□□□□ -0.11
TRAPPC12-203ENST00000411973 GOLGA8NF8WBI6 632 aa14.34□□□□□ -0.11
TRAPPC12-203ENST00000411973 PRKNO60260 465 aaPredicted RBP14.34□□□□□ -0.11
TRAPPC12-203ENST00000411973 SLITRK5O94991 958 aa14.34□□□□□ -0.11
TRAPPC12-203ENST00000411973 CLPSP04118 112 aa14.34□□□□□ -0.11
TRAPPC12-203ENST00000411973 IFI6P09912 130 aa14.34□□□□□ -0.11
TRAPPC12-203ENST00000411973 NTSP30990 170 aa14.34□□□□□ -0.11
TRAPPC12-203ENST00000411973 FRKP42685 505 aaPredicted RBP14.34□□□□□ -0.11
TRAPPC12-203ENST00000411973 SLC37A1P57057 533 aa14.34□□□□□ -0.11
TRAPPC12-203ENST00000411973 MLF1P58340 268 aa14.34□□□□□ -0.11
TRAPPC12-203ENST00000411973 ZNF385BQ569K4 471 aa14.34□□□□□ -0.11
TRAPPC12-203ENST00000411973 ZNF628Q5EBL2 1059 aa14.34□□□□□ -0.11
TRAPPC12-203ENST00000411973 RNF111Q6ZNA4 994 aa14.34□□□□□ -0.11
TRAPPC12-203ENST00000411973 CAMKMTQ7Z624 323 aa14.34□□□□□ -0.11
TRAPPC12-203ENST00000411973 VWA5B2Q8N398 1253 aa14.34□□□□□ -0.11
TRAPPC12-203ENST00000411973 ZADH2Q8N4Q0 377 aa14.34□□□□□ -0.11
TRAPPC12-203ENST00000411973 NATD1Q8N6N6 113 aa14.34□□□□□ -0.11
TRAPPC12-203ENST00000411973 ZNF615Q8N8J6 731 aa14.34□□□□□ -0.11
TRAPPC12-203ENST00000411973 OR5L2Q8NGL0 311 aa14.34□□□□□ -0.11
TRAPPC12-203ENST00000411973 CEP70Q8NHQ1 597 aa14.34□□□□□ -0.11
TRAPPC12-203ENST00000411973 NUBPLQ8TB37 319 aa14.34□□□□□ -0.11
TRAPPC12-203ENST00000411973 DOK4Q8TEW6 326 aa14.34□□□□□ -0.11
TRAPPC12-203ENST00000411973 STON2Q8WXE9 905 aa14.34□□□□□ -0.11
TRAPPC12-203ENST00000411973 COQ8BQ96D53 544 aa14.34□□□□□ -0.11
TRAPPC12-203ENST00000411973 AMDHD1Q96NU7 426 aa14.34□□□□□ -0.11
TRAPPC12-203ENST00000411973 PRPF18Q99633 342 aaKnown RBP14.34□□□□□ -0.11
TRAPPC12-203ENST00000411973 CDCP1Q9H5V8 836 aa14.34□□□□□ -0.11
TRAPPC12-203ENST00000411973 SLAMF7Q9NQ25 335 aa14.34□□□□□ -0.11
TRAPPC12-203ENST00000411973 AIG1Q9NVV5 245 aa14.34□□□□□ -0.11
TRAPPC12-203ENST00000411973 SH3BP4Q9P0V3 963 aa14.34□□□□□ -0.11
TRAPPC12-203ENST00000411973 NUP214P35658 2090 aaPredicted RBP14.34□□□□□ -0.11
TRAPPC12-203ENST00000411973 ANKRD28O15084 1053 aa14.33□□□□□ -0.12
TRAPPC12-203ENST00000411973 PDPK1O15530 556 aa14.33□□□□□ -0.12
TRAPPC12-203ENST00000411973 MAN1A2O60476 641 aa14.33□□□□□ -0.12
TRAPPC12-203ENST00000411973 ALDOCP09972 364 aaKnown RBP14.33□□□□□ -0.12
TRAPPC12-203ENST00000411973 SSTR4P31391 388 aa14.33□□□□□ -0.12
TRAPPC12-203ENST00000411973 MDH1P40925 334 aaKnown RBP14.33□□□□□ -0.12
TRAPPC12-203ENST00000411973 IDH3AP50213 366 aa14.33□□□□□ -0.12
TRAPPC12-203ENST00000411973 NCBP2P52298 156 aaKnown RBP eCLIP14.33□□□□□ -0.12
TRAPPC12-203ENST00000411973 AQP5P55064 265 aa14.33□□□□□ -0.12
TRAPPC12-203ENST00000411973 GUCY1A3Q02108 690 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms