RNA–Protein interactions for RNA: ENST00000410038.5

LIMS2-209, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2 BASIC

Gene LIMS2, Length 1,695 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-209ENST00000410038 PRICKLE4Q2TBC4 344 aa13.4□□□□□ -0.26
LIMS2-209ENST00000410038 FAM174BQ3ZCQ3 159 aa13.4□□□□□ -0.26
LIMS2-209ENST00000410038 DCAF10Q5QP82 559 aa13.4□□□□□ -0.26
LIMS2-209ENST00000410038 FUNDC1Q8IVP5 155 aa13.4□□□□□ -0.26
LIMS2-209ENST00000410038 CPSF7Q8N684 471 aaKnown RBP13.4□□□□□ -0.26
LIMS2-209ENST00000410038 ADCY4Q8NFM4 1077 aa13.4□□□□□ -0.26
LIMS2-209ENST00000410038 OR14A16Q8NHC5 309 aa13.4□□□□□ -0.26
LIMS2-209ENST00000410038 DAZLQ92904 295 aaKnown RBP13.4□□□□□ -0.26
LIMS2-209ENST00000410038 RIT1Q92963 219 aa13.4□□□□□ -0.26
LIMS2-209ENST00000410038 UBL7Q96S82 380 aaPredicted RBP13.4□□□□□ -0.26
LIMS2-209ENST00000410038 ZBTB18Q99592 522 aa13.4□□□□□ -0.26
LIMS2-209ENST00000410038 GLIPR2Q9H4G4 154 aa13.4□□□□□ -0.26
LIMS2-209ENST00000410038 SAR1AQ9NR31 198 aa13.4□□□□□ -0.26
LIMS2-209ENST00000410038 ACSS1Q9NUB1 689 aaPredicted RBP13.4□□□□□ -0.26
LIMS2-209ENST00000410038 MAN2B2Q9Y2E5 1009 aa13.4□□□□□ -0.26
LIMS2-209ENST00000410038 NBEAQ8NFP9 2946 aa13.39□□□□□ -0.27
LIMS2-209ENST00000410038 ARGFXA6NJG6 315 aa13.39□□□□□ -0.27
LIMS2-209ENST00000410038 HRKO00198 91 aa13.39□□□□□ -0.27
LIMS2-209ENST00000410038 DDAH2O95865 285 aa13.39□□□□□ -0.27
LIMS2-209ENST00000410038 CT62P0C5K7 136 aa13.39□□□□□ -0.27
LIMS2-209ENST00000410038 S100A3P33764 101 aa13.39□□□□□ -0.27
LIMS2-209ENST00000410038 KIR3DL1P43629 444 aa13.39□□□□□ -0.27
LIMS2-209ENST00000410038 GPR143P51810 404 aa13.39□□□□□ -0.27
LIMS2-209ENST00000410038 PGDP52209 483 aa13.39□□□□□ -0.27
LIMS2-209ENST00000410038 POLR2JP52435 117 aaKnown RBP13.39□□□□□ -0.27
LIMS2-209ENST00000410038 WNT3P56703 355 aa13.39□□□□□ -0.27
LIMS2-209ENST00000410038 SLC26A5P58743 744 aa13.39□□□□□ -0.27
LIMS2-209ENST00000410038 MGAT2Q10469 447 aa13.39□□□□□ -0.27
LIMS2-209ENST00000410038 SPRED3Q2MJR0 410 aa13.39□□□□□ -0.27
LIMS2-209ENST00000410038 DEFB109BQ30KR1 87 aa13.39□□□□□ -0.27
LIMS2-209ENST00000410038 PLAG1Q6DJT9 500 aa13.39□□□□□ -0.27
LIMS2-209ENST00000410038 FAM111BQ6SJ93 734 aa13.39□□□□□ -0.27
LIMS2-209ENST00000410038 ZNF551Q7Z340 670 aaPredicted RBP13.39□□□□□ -0.27
LIMS2-209ENST00000410038 GALNT12Q8IXK2 581 aa13.39□□□□□ -0.27
LIMS2-209ENST00000410038 NATD1Q8N6N6 113 aa13.39□□□□□ -0.27
LIMS2-209ENST00000410038 TMEM102Q8N9M5 508 aaPredicted RBP13.39□□□□□ -0.27
LIMS2-209ENST00000410038 MORN4Q8NDC4 146 aa13.39□□□□□ -0.27
LIMS2-209ENST00000410038 B3GNT7Q8NFL0 401 aa13.39□□□□□ -0.27
LIMS2-209ENST00000410038 OR9A2Q8NGT5 310 aa13.39□□□□□ -0.27
LIMS2-209ENST00000410038 SLC2A12Q8TD20 617 aa13.39□□□□□ -0.27
LIMS2-209ENST00000410038 SNRNP27Q8WVK2 155 aaKnown RBP13.39□□□□□ -0.27
LIMS2-209ENST00000410038 ZBED6CLQ96FA7 236 aaPredicted RBP13.39□□□□□ -0.27
LIMS2-209ENST00000410038 FER1L6-AS2Q96M78 137 aa13.39□□□□□ -0.27
LIMS2-209ENST00000410038 MAT2BQ9NZL9 334 aa13.39□□□□□ -0.27
LIMS2-209ENST00000410038 CCDC167Q9P0B6 97 aa13.39□□□□□ -0.27
LIMS2-209ENST00000410038 PPIEQ9UNP9 301 aaKnown RBP13.39□□□□□ -0.27
LIMS2-209ENST00000410038 A0A1W2PRB8 838 aa13.38□□□□□ -0.27
LIMS2-209ENST00000410038 FAM234BA2RU67 622 aa13.38□□□□□ -0.27
LIMS2-209ENST00000410038 SCN2BO60939 215 aa13.38□□□□□ -0.27
LIMS2-209ENST00000410038 PGRP06401 933 aa13.38□□□□□ -0.27
LIMS2-209ENST00000410038 CD1EP15812 388 aa13.38□□□□□ -0.27
LIMS2-209ENST00000410038 MANFP55145 182 aaKnown RBP13.38□□□□□ -0.27
LIMS2-209ENST00000410038 CXADRP78310 365 aa13.38□□□□□ -0.27
LIMS2-209ENST00000410038 Q0VFX4 171 aa13.38□□□□□ -0.27
LIMS2-209ENST00000410038 MAP4K2Q12851 820 aa13.38□□□□□ -0.27
LIMS2-209ENST00000410038 CHAF1BQ13112 559 aa13.38□□□□□ -0.27
LIMS2-209ENST00000410038 UBAP2LQ14157 1087 aaKnown RBP13.38□□□□□ -0.27
LIMS2-209ENST00000410038 ZNF267Q14586 743 aaPredicted RBP13.38□□□□□ -0.27
LIMS2-209ENST00000410038 EXT1Q16394 746 aa13.38□□□□□ -0.27
LIMS2-209ENST00000410038 BTBD16Q32M84 506 aa13.38□□□□□ -0.27
LIMS2-209ENST00000410038 AGKQ53H12 422 aa13.38□□□□□ -0.27
LIMS2-209ENST00000410038 ZNF628Q5EBL2 1059 aa13.38□□□□□ -0.27
LIMS2-209ENST00000410038 APCDD1LQ8NCL9 501 aa13.38□□□□□ -0.27
LIMS2-209ENST00000410038 LSM14AQ8ND56 463 aaKnown RBP13.38□□□□□ -0.27
LIMS2-209ENST00000410038 ZNF675Q8TD23 568 aa13.38□□□□□ -0.27
LIMS2-209ENST00000410038 CTHRC1Q96CG8 243 aa13.38□□□□□ -0.27
LIMS2-209ENST00000410038 SENP5Q96HI0 755 aaPredicted RBP13.38□□□□□ -0.27
LIMS2-209ENST00000410038 FBXL20Q96IG2 436 aa13.38□□□□□ -0.27
LIMS2-209ENST00000410038 CNPPD1Q9BV87 410 aa13.38□□□□□ -0.27
LIMS2-209ENST00000410038 OR8D2Q9GZM6 311 aa13.38□□□□□ -0.27
LIMS2-209ENST00000410038 NMUR2Q9GZQ4 415 aa13.38□□□□□ -0.27
LIMS2-209ENST00000410038 TMEM45AQ9NWC5 275 aa13.38□□□□□ -0.27
LIMS2-209ENST00000410038 CNTRLQ7Z7A1 2325 aa13.38□□□□□ -0.27
LIMS2-209ENST00000410038 DYRK3O43781 588 aa13.37□□□□□ -0.27
LIMS2-209ENST00000410038 IGKV3-11P04433 115 aa13.37□□□□□ -0.27
LIMS2-209ENST00000410038 IL6P05231 212 aa13.37□□□□□ -0.27
LIMS2-209ENST00000410038 CELA2AP08217 269 aa13.37□□□□□ -0.27
LIMS2-209ENST00000410038 S1PR1P21453 382 aa13.37□□□□□ -0.27
LIMS2-209ENST00000410038 RRADP55042 308 aa13.37□□□□□ -0.27
LIMS2-209ENST00000410038 MRPS35P82673 323 aaKnown RBP13.37□□□□□ -0.27
LIMS2-209ENST00000410038 HSPB3Q12988 150 aa13.37□□□□□ -0.27
LIMS2-209ENST00000410038 RCAN2Q14206 197 aa13.37□□□□□ -0.27
LIMS2-209ENST00000410038 MLC1Q15049 377 aa13.37□□□□□ -0.27
LIMS2-209ENST00000410038 TRMT12Q53H54 448 aaKnown RBP13.37□□□□□ -0.27
LIMS2-209ENST00000410038 BLOC1S3Q6QNY0 202 aa13.37□□□□□ -0.27
LIMS2-209ENST00000410038 VWA5B2Q8N398 1253 aa13.37□□□□□ -0.27
LIMS2-209ENST00000410038 ZNF321PQ8N8H1 164 aa13.37□□□□□ -0.27
LIMS2-209ENST00000410038 CLEC1AQ8NC01 280 aa13.37□□□□□ -0.27
LIMS2-209ENST00000410038 ZFP28Q8NHY6 868 aa13.37□□□□□ -0.27
LIMS2-209ENST00000410038 M1APQ8TC57 530 aa13.37□□□□□ -0.27
LIMS2-209ENST00000410038 ZNF721Q8TF20 911 aa13.37□□□□□ -0.27
LIMS2-209ENST00000410038 KAT2AQ92830 837 aa13.37□□□□□ -0.27
LIMS2-209ENST00000410038 CRELD1Q96HD1 420 aa13.37□□□□□ -0.27
LIMS2-209ENST00000410038 ING2Q9H160 280 aa13.37□□□□□ -0.27
LIMS2-209ENST00000410038 ATP13A2Q9NQ11 1180 aa13.37□□□□□ -0.27
LIMS2-209ENST00000410038 FAM120CQ9NX05 1096 aaKnown RBP13.37□□□□□ -0.27
LIMS2-209ENST00000410038 ZNF639Q9UID6 485 aa13.37□□□□□ -0.27
LIMS2-209ENST00000410038 ERVK-19Q9WJR5 959 aa13.37□□□□□ -0.27
LIMS2-209ENST00000410038 ARL2BPQ9Y2Y0 163 aa13.37□□□□□ -0.27
LIMS2-209ENST00000410038 KCNMB2Q9Y691 235 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms