RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 SLC37A1P57057 533 aa20.77■□□□□ 0.92
PTCD3-203ENST00000409783 RNF4P78317 190 aa20.77■□□□□ 0.92
PTCD3-203ENST00000409783 MAP4K2Q12851 820 aa20.77■□□□□ 0.92
PTCD3-203ENST00000409783 ZNF468Q5VIY5 522 aaPredicted RBP20.77■□□□□ 0.92
PTCD3-203ENST00000409783 FAM111BQ6SJ93 734 aa20.77■□□□□ 0.92
PTCD3-203ENST00000409783 C16orf47Q6ZP98 133 aaPredicted RBP20.77■□□□□ 0.92
PTCD3-203ENST00000409783 LRRC25Q8N386 305 aaPredicted RBP20.77■□□□□ 0.92
PTCD3-203ENST00000409783 CLHC1Q8NHS4 586 aa20.77■□□□□ 0.92
PTCD3-203ENST00000409783 CTHRC1Q96CG8 243 aa20.77■□□□□ 0.92
PTCD3-203ENST00000409783 ZNF764Q96H86 408 aaPredicted RBP20.77■□□□□ 0.92
PTCD3-203ENST00000409783 C1orf50Q9BV19 199 aa20.77■□□□□ 0.92
PTCD3-203ENST00000409783 LIN28AQ9H9Z2 209 aaKnown RBP20.77■□□□□ 0.92
PTCD3-203ENST00000409783 ZNF639Q9UID6 485 aa20.77■□□□□ 0.92
PTCD3-203ENST00000409783 ZNF462Q96JM2 2506 aa20.76■□□□□ 0.91
PTCD3-203ENST00000409783 DYTNA2CJ06 578 aa20.76■□□□□ 0.91
PTCD3-203ENST00000409783 OR5H15A6NDH6 313 aa20.76■□□□□ 0.91
PTCD3-203ENST00000409783 GABRR3A8MPY1 467 aa20.76■□□□□ 0.91
PTCD3-203ENST00000409783 MYO1GB0I1T2 1018 aa20.76■□□□□ 0.91
PTCD3-203ENST00000409783 DYRK3O43781 588 aa20.76■□□□□ 0.91
PTCD3-203ENST00000409783 TBX19O60806 448 aa20.76■□□□□ 0.91
PTCD3-203ENST00000409783 NT5EP21589 574 aa20.76■□□□□ 0.91
PTCD3-203ENST00000409783 SSTR4P31391 388 aa20.76■□□□□ 0.91
PTCD3-203ENST00000409783 ARG2P78540 354 aa20.76■□□□□ 0.91
PTCD3-203ENST00000409783 EMX2Q04743 252 aa20.76■□□□□ 0.91
PTCD3-203ENST00000409783 TUBA3CQ13748 450 aa20.76■□□□□ 0.91
PTCD3-203ENST00000409783 PDE7AQ13946 482 aa20.76■□□□□ 0.91
PTCD3-203ENST00000409783 LTB4RQ15722 352 aa20.76■□□□□ 0.91
PTCD3-203ENST00000409783 SMU1Q2TAY7 513 aa20.76■□□□□ 0.91
PTCD3-203ENST00000409783 IL23RQ5VWK5 629 aa20.76■□□□□ 0.91
PTCD3-203ENST00000409783 TUBA3EQ6PEY2 450 aa20.76■□□□□ 0.91
PTCD3-203ENST00000409783 CCDC116Q8IYX3 515 aa20.76■□□□□ 0.91
PTCD3-203ENST00000409783 ZNF615Q8N8J6 731 aa20.76■□□□□ 0.91
PTCD3-203ENST00000409783 FNDC5Q8NAU1 212 aa20.76■□□□□ 0.91
PTCD3-203ENST00000409783 GFM2Q969S9 779 aaKnown RBP20.76■□□□□ 0.91
PTCD3-203ENST00000409783 INTS9Q9NV88 658 aaKnown RBP20.76■□□□□ 0.91
PTCD3-203ENST00000409783 ASIC5Q9NY37 505 aa20.76■□□□□ 0.91
PTCD3-203ENST00000409783 LUZP4Q9P127 313 aa20.76■□□□□ 0.91
PTCD3-203ENST00000409783 MYOTQ9UBF9 498 aa20.76■□□□□ 0.91
PTCD3-203ENST00000409783 COPS7AQ9UBW8 275 aa20.76■□□□□ 0.91
PTCD3-203ENST00000409783 CDK2AP1O14519 115 aa20.75■□□□□ 0.91
PTCD3-203ENST00000409783 SDHDO14521 159 aa20.75■□□□□ 0.91
PTCD3-203ENST00000409783 HDAC3O15379 428 aa20.75■□□□□ 0.91
PTCD3-203ENST00000409783 LRATO95237 230 aa20.75■□□□□ 0.91
PTCD3-203ENST00000409783 MAPK1P28482 360 aa20.75■□□□□ 0.91
PTCD3-203ENST00000409783 TRHRP34981 398 aaPredicted RBP20.75■□□□□ 0.91
PTCD3-203ENST00000409783 CD96P40200 585 aa20.75■□□□□ 0.91
PTCD3-203ENST00000409783 ASMTP46597 345 aa20.75■□□□□ 0.91
PTCD3-203ENST00000409783 DUSP8Q13202 625 aa20.75■□□□□ 0.91
PTCD3-203ENST00000409783 MPEG1Q2M385 716 aa20.75■□□□□ 0.91
PTCD3-203ENST00000409783 ZNF385BQ569K4 471 aa20.75■□□□□ 0.91
PTCD3-203ENST00000409783 ZNF628Q5EBL2 1059 aa20.75■□□□□ 0.91
PTCD3-203ENST00000409783 LARP4Q71RC2 724 aaKnown RBP eCLIP20.75■□□□□ 0.91
PTCD3-203ENST00000409783 ZNF227Q86WZ6 799 aa20.75■□□□□ 0.91
PTCD3-203ENST00000409783 WDR75Q8IWA0 830 aaKnown RBP20.75■□□□□ 0.91
PTCD3-203ENST00000409783 SAMD14Q8IZD0 417 aaPredicted RBP20.75■□□□□ 0.91
PTCD3-203ENST00000409783 LIX1Q8N485 282 aa20.75■□□□□ 0.91
PTCD3-203ENST00000409783 SIMC1Q8NDZ2 872 aa20.75■□□□□ 0.91
PTCD3-203ENST00000409783 ADCY4Q8NFM4 1077 aa20.75■□□□□ 0.91
PTCD3-203ENST00000409783 NUBPLQ8TB37 319 aa20.75■□□□□ 0.91
PTCD3-203ENST00000409783 ZNF675Q8TD23 568 aa20.75■□□□□ 0.91
PTCD3-203ENST00000409783 C7orf26Q96N11 449 aa20.75■□□□□ 0.91
PTCD3-203ENST00000409783 EPN3Q9H201 632 aa20.75■□□□□ 0.91
PTCD3-203ENST00000409783 REEP4Q9H6H4 257 aa20.75■□□□□ 0.91
PTCD3-203ENST00000409783 TRIM45Q9H8W5 580 aaPredicted RBP20.75■□□□□ 0.91
PTCD3-203ENST00000409783 SLAMF7Q9NQ25 335 aa20.75■□□□□ 0.91
PTCD3-203ENST00000409783 MIEF1Q9NQG6 463 aa20.75■□□□□ 0.91
PTCD3-203ENST00000409783 MARCOQ9UEW3 520 aaPredicted RBP20.75■□□□□ 0.91
PTCD3-203ENST00000409783 ZNF195O14628 629 aa20.74■□□□□ 0.91
PTCD3-203ENST00000409783 AKAP10O43572 662 aa20.74■□□□□ 0.91
PTCD3-203ENST00000409783 ZNF354AO60765 605 aaPredicted RBP20.74■□□□□ 0.91
PTCD3-203ENST00000409783 ITGA10O75578 1167 aa20.74■□□□□ 0.91
PTCD3-203ENST00000409783 PRPS2P11908 318 aa20.74■□□□□ 0.91
PTCD3-203ENST00000409783 PTGR1Q14914 329 aa20.74■□□□□ 0.91
PTCD3-203ENST00000409783 ZNF169Q14929 603 aaPredicted RBP20.74■□□□□ 0.91
PTCD3-203ENST00000409783 TLR1Q15399 786 aa20.74■□□□□ 0.91
PTCD3-203ENST00000409783 RNF111Q6ZNA4 994 aa20.74■□□□□ 0.91
PTCD3-203ENST00000409783 MAVSQ7Z434 540 aa20.74■□□□□ 0.91
PTCD3-203ENST00000409783 LRRC34Q8IZ02 419 aa20.74■□□□□ 0.91
PTCD3-203ENST00000409783 VWA5B2Q8N398 1253 aa20.74■□□□□ 0.91
PTCD3-203ENST00000409783 MDS2Q8NDY4 140 aa20.74■□□□□ 0.91
PTCD3-203ENST00000409783 LRRC8CQ8TDW0 803 aa20.74■□□□□ 0.91
PTCD3-203ENST00000409783 CKAP2Q8WWK9 683 aa20.74■□□□□ 0.91
PTCD3-203ENST00000409783 SIGLEC12Q96PQ1 595 aa20.74■□□□□ 0.91
PTCD3-203ENST00000409783 SLCO1B3Q9NPD5 702 aa20.74■□□□□ 0.91
PTCD3-203ENST00000409783 ANKRD10Q9NXR5 420 aa20.74■□□□□ 0.91
PTCD3-203ENST00000409783 ABI3Q9P2A4 366 aa20.74■□□□□ 0.91
PTCD3-203ENST00000409783 ENTPD4Q9Y227 616 aa20.74■□□□□ 0.91
PTCD3-203ENST00000409783 PCDHGA10Q9Y5H3 936 aa20.74■□□□□ 0.91
PTCD3-203ENST00000409783 HEMK1Q9Y5R4 338 aaPredicted RBP20.74■□□□□ 0.91
PTCD3-203ENST00000409783 OR6C76A6NM76 312 aa20.73■□□□□ 0.91
PTCD3-203ENST00000409783 OR2J2O76002 312 aa20.73■□□□□ 0.91
PTCD3-203ENST00000409783 CBX7O95931 251 aa20.73■□□□□ 0.91
PTCD3-203ENST00000409783 KITP10721 976 aa20.73■□□□□ 0.91
PTCD3-203ENST00000409783 PCSK2P16519 638 aa20.73■□□□□ 0.91
PTCD3-203ENST00000409783 EBPQ15125 230 aaKnown RBP20.73■□□□□ 0.91
PTCD3-203ENST00000409783 TRMT12Q53H54 448 aaKnown RBP20.73■□□□□ 0.91
PTCD3-203ENST00000409783 ANKRD26P1Q6NSI1 321 aa20.73■□□□□ 0.91
PTCD3-203ENST00000409783 OR7G1Q8NGA0 311 aa20.73■□□□□ 0.91
PTCD3-203ENST00000409783 OR5L2Q8NGL0 311 aa20.73■□□□□ 0.91
PTCD3-203ENST00000409783 OR9A2Q8NGT5 310 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms