RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 ANKZF1Q9H8Y5 726 aa3.96□□□□□ -1.78
CLK1-203ENST00000409769 PDFQ9HBH1 243 aa3.96□□□□□ -1.78
CLK1-203ENST00000409769 ZBTB20Q9HC78 741 aaPredicted RBP3.96□□□□□ -1.78
CLK1-203ENST00000409769 GDF3Q9NR23 364 aa3.96□□□□□ -1.78
CLK1-203ENST00000409769 EPS15L1Q9UBC2 864 aa3.96□□□□□ -1.78
CLK1-203ENST00000409769 CLEC4EQ9ULY5 219 aa3.96□□□□□ -1.78
CLK1-203ENST00000409769 OR51B4Q9Y5P0 310 aa3.96□□□□□ -1.78
CLK1-203ENST00000409769 ATG2BQ96BY7 2078 aa3.96□□□□□ -1.78
CLK1-203ENST00000409769 A0A0D9SEW6 157 aa3.95□□□□□ -1.78
CLK1-203ENST00000409769 CXorf51AA0A1B0GTR3 108 aa3.95□□□□□ -1.78
CLK1-203ENST00000409769 ILVBLA1L0T0 632 aa3.95□□□□□ -1.78
CLK1-203ENST00000409769 ZSCAN5CA6NGD5 496 aaPredicted RBP3.95□□□□□ -1.78
CLK1-203ENST00000409769 SLC9A3R1O14745 358 aaPredicted RBP3.95□□□□□ -1.78
CLK1-203ENST00000409769 TTI1O43156 1089 aa3.95□□□□□ -1.78
CLK1-203ENST00000409769 CACNG3O60359 315 aa3.95□□□□□ -1.78
CLK1-203ENST00000409769 PRAMEF11O60813 436 aa3.95□□□□□ -1.78
CLK1-203ENST00000409769 TBL1XO60907 577 aa3.95□□□□□ -1.78
CLK1-203ENST00000409769 ECI2O75521 394 aa3.95□□□□□ -1.78
CLK1-203ENST00000409769 ZNF189O75820 626 aaPredicted RBP3.95□□□□□ -1.78
CLK1-203ENST00000409769 ZMPSTE24O75844 475 aa3.95□□□□□ -1.78
CLK1-203ENST00000409769 CD160O95971 181 aa3.95□□□□□ -1.78
CLK1-203ENST00000409769 KRT14P02533 472 aa3.95□□□□□ -1.78
CLK1-203ENST00000409769 RHOXF2BP0C7M4 288 aa3.95□□□□□ -1.78
CLK1-203ENST00000409769 CISD3P0C7P0 127 aa3.95□□□□□ -1.78
CLK1-203ENST00000409769 ETS1P14921 441 aa3.95□□□□□ -1.78
CLK1-203ENST00000409769 FOSL2P15408 326 aa3.95□□□□□ -1.78
CLK1-203ENST00000409769 ALOX12P18054 663 aa3.95□□□□□ -1.78
CLK1-203ENST00000409769 CCNCP24863 283 aa3.95□□□□□ -1.78
CLK1-203ENST00000409769 PTPN3P26045 913 aa3.95□□□□□ -1.78
CLK1-203ENST00000409769 HLA-FP30511 346 aa3.95□□□□□ -1.78
CLK1-203ENST00000409769 OR1E1P30953 314 aa3.95□□□□□ -1.78
CLK1-203ENST00000409769 STIP1P31948 543 aaKnown RBP3.95□□□□□ -1.78
CLK1-203ENST00000409769 PLK1P53350 603 aa3.95□□□□□ -1.78
CLK1-203ENST00000409769 PNLIPRP2P54317 469 aa3.95□□□□□ -1.78
CLK1-203ENST00000409769 IFI35P80217 286 aaPredicted RBP3.95□□□□□ -1.78
CLK1-203ENST00000409769 MRPS25P82663 173 aaKnown RBP3.95□□□□□ -1.78
CLK1-203ENST00000409769 ARF5P84085 180 aa3.95□□□□□ -1.78
CLK1-203ENST00000409769 DR1Q01658 176 aa3.95□□□□□ -1.78
CLK1-203ENST00000409769 CREB5Q02930 508 aa3.95□□□□□ -1.78
CLK1-203ENST00000409769 GNA12Q03113 381 aa3.95□□□□□ -1.78
CLK1-203ENST00000409769 WASHC5Q12768 1159 aa3.95□□□□□ -1.78
CLK1-203ENST00000409769 EPS8Q12929 822 aa3.95□□□□□ -1.78
CLK1-203ENST00000409769 UBE2V1Q13404 147 aa3.95□□□□□ -1.78
CLK1-203ENST00000409769 HTR4Q13639 388 aa3.95□□□□□ -1.78
CLK1-203ENST00000409769 PTK6Q13882 451 aa3.95□□□□□ -1.78
CLK1-203ENST00000409769 PDK1Q15118 436 aa3.95□□□□□ -1.78
CLK1-203ENST00000409769 FCN2Q15485 313 aa3.95□□□□□ -1.78
CLK1-203ENST00000409769 KCTD19Q17RG1 926 aaPredicted RBP3.95□□□□□ -1.78
CLK1-203ENST00000409769 DUOXA1Q1HG43 343 aa3.95□□□□□ -1.78
CLK1-203ENST00000409769 MPPE1Q53F39 396 aa3.95□□□□□ -1.78
CLK1-203ENST00000409769 TEX35Q5T0J7 233 aa3.95□□□□□ -1.78
CLK1-203ENST00000409769 FAM205BPQ63HN1 556 aa3.95□□□□□ -1.78
CLK1-203ENST00000409769 DUPD1Q68J44 220 aa3.95□□□□□ -1.78
CLK1-203ENST00000409769 SLC35E4Q6ICL7 350 aa3.95□□□□□ -1.78
CLK1-203ENST00000409769 C8orf74Q6P047 294 aa3.95□□□□□ -1.78
CLK1-203ENST00000409769 PRUNE1Q86TP1 453 aa3.95□□□□□ -1.78
CLK1-203ENST00000409769 LONP2Q86WA8 852 aa3.95□□□□□ -1.78
CLK1-203ENST00000409769 TMEM25Q86YD3 366 aa3.95□□□□□ -1.78
CLK1-203ENST00000409769 CDKL3Q8IVW4 592 aaPredicted RBP3.95□□□□□ -1.78
CLK1-203ENST00000409769 MFSD6LQ8IWD5 586 aa3.95□□□□□ -1.78
CLK1-203ENST00000409769 KLHDC8BQ8IXV7 354 aa3.95□□□□□ -1.78
CLK1-203ENST00000409769 DEFB123Q8N688 67 aa3.95□□□□□ -1.78
CLK1-203ENST00000409769 TEX26Q8N6G2 289 aa3.95□□□□□ -1.78
CLK1-203ENST00000409769 DCAF4L2Q8NA75 395 aa3.95□□□□□ -1.78
CLK1-203ENST00000409769 CCDC26Q8TAB7 109 aa3.95□□□□□ -1.78
CLK1-203ENST00000409769 FIBINQ8TAL6 211 aa3.95□□□□□ -1.78
CLK1-203ENST00000409769 LRRC8CQ8TDW0 803 aa3.95□□□□□ -1.78
CLK1-203ENST00000409769 GRK7Q8WTQ7 553 aa3.95□□□□□ -1.78
CLK1-203ENST00000409769 DEPDC1BQ8WUY9 529 aa3.95□□□□□ -1.78
CLK1-203ENST00000409769 TFB1MQ8WVM0 346 aaKnown RBP3.95□□□□□ -1.78
CLK1-203ENST00000409769 HTR3CQ8WXA8 447 aa3.95□□□□□ -1.78
CLK1-203ENST00000409769 FGF14Q92915 247 aa3.95□□□□□ -1.78
CLK1-203ENST00000409769 ELSPBP1Q96BH3 223 aa3.95□□□□□ -1.78
CLK1-203ENST00000409769 TMA16Q96EY4 203 aaKnown RBP3.95□□□□□ -1.78
CLK1-203ENST00000409769 CELF6Q96J87 481 aaKnown RBP3.95□□□□□ -1.78
CLK1-203ENST00000409769 SPATA13Q96N96 652 aa3.95□□□□□ -1.78
CLK1-203ENST00000409769 LGMNQ99538 433 aa3.95□□□□□ -1.78
CLK1-203ENST00000409769 IL12RB2Q99665 862 aa3.95□□□□□ -1.78
CLK1-203ENST00000409769 RHOXF2Q9BQY4 288 aa3.95□□□□□ -1.78
CLK1-203ENST00000409769 SRSF8Q9BRL6 282 aaKnown RBP3.95□□□□□ -1.78
CLK1-203ENST00000409769 TRIM51Q9BSJ1 452 aa3.95□□□□□ -1.78
CLK1-203ENST00000409769 PLA2G2FQ9BZM2 168 aa3.95□□□□□ -1.78
CLK1-203ENST00000409769 LINC00597Q9H2U6 94 aa3.95□□□□□ -1.78
CLK1-203ENST00000409769 HRH4Q9H3N8 390 aa3.95□□□□□ -1.78
CLK1-203ENST00000409769 TFB2MQ9H5Q4 396 aaKnown RBP3.95□□□□□ -1.78
CLK1-203ENST00000409769 ZFP14Q9HCL3 533 aa3.95□□□□□ -1.78
CLK1-203ENST00000409769 HPS4Q9NQG7 708 aa3.95□□□□□ -1.78
CLK1-203ENST00000409769 SPHK2Q9NRA0 654 aa3.95□□□□□ -1.78
CLK1-203ENST00000409769 DUS2Q9NX74 493 aaKnown RBP3.95□□□□□ -1.78
CLK1-203ENST00000409769 WSB2Q9NYS7 404 aaPredicted RBP3.95□□□□□ -1.78
CLK1-203ENST00000409769 ACAD8Q9UKU7 415 aa3.95□□□□□ -1.78
CLK1-203ENST00000409769 B3GALT5Q9Y2C3 310 aa3.95□□□□□ -1.78
CLK1-203ENST00000409769 HEY1Q9Y5J3 304 aa3.95□□□□□ -1.78
CLK1-203ENST00000409769 C5orf42Q9H799 3197 aa3.95□□□□□ -1.78
CLK1-203ENST00000409769 UQCRHLA0A096LP55 91 aa3.94□□□□□ -1.78
CLK1-203ENST00000409769 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.94□□□□□ -1.78
CLK1-203ENST00000409769 LNP1A1A4G5 178 aa3.94□□□□□ -1.78
CLK1-203ENST00000409769 ARHGAP42A6NI28 874 aa3.94□□□□□ -1.78
CLK1-203ENST00000409769 LRRC72A6NJI9 287 aa3.94□□□□□ -1.78
CLK1-203ENST00000409769 ERI2A8K979 691 aaKnown RBP3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms