RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 PHYHIPLQ96FC7 376 aa2.95□□□□□ -1.94
PMS1-203ENST00000409593 DDX50Q9BQ39 737 aaKnown RBP2.95□□□□□ -1.94
PMS1-203ENST00000409593 CACNG6Q9BXT2 260 aa2.95□□□□□ -1.94
PMS1-203ENST00000409593 PDFQ9HBH1 243 aa2.95□□□□□ -1.94
PMS1-203ENST00000409593 IL17CQ9P0M4 197 aa2.95□□□□□ -1.94
PMS1-203ENST00000409593 PRODH2Q9UF12 536 aa2.95□□□□□ -1.94
PMS1-203ENST00000409593 LEF1Q9UJU2 399 aaPredicted RBP2.95□□□□□ -1.94
PMS1-203ENST00000409593 PSMD3O43242 534 aa2.94□□□□□ -1.94
PMS1-203ENST00000409593 PRG2P13727 222 aa2.94□□□□□ -1.94
PMS1-203ENST00000409593 MEOX2P50222 304 aa2.94□□□□□ -1.94
PMS1-203ENST00000409593 TKTL1P51854 596 aa2.94□□□□□ -1.94
PMS1-203ENST00000409593 PAX2Q02962 417 aa2.94□□□□□ -1.94
PMS1-203ENST00000409593 KRTAP13-3Q3SY46 172 aa2.94□□□□□ -1.94
PMS1-203ENST00000409593 IFI44LQ53G44 452 aa2.94□□□□□ -1.94
PMS1-203ENST00000409593 HECTD3Q5T447 861 aa2.94□□□□□ -1.94
PMS1-203ENST00000409593 KCTD11Q693B1 232 aa2.94□□□□□ -1.94
PMS1-203ENST00000409593 RTL6Q6ICC9 239 aa2.94□□□□□ -1.94
PMS1-203ENST00000409593 STEAP1BQ6NZ63 245 aa2.94□□□□□ -1.94
PMS1-203ENST00000409593 CD164L2Q6UWJ8 174 aa2.94□□□□□ -1.94
PMS1-203ENST00000409593 LINC00696Q6ZRV3 163 aa2.94□□□□□ -1.94
PMS1-203ENST00000409593 OR4L1Q8NH43 312 aa2.94□□□□□ -1.94
PMS1-203ENST00000409593 CRYGNQ8WXF5 182 aa2.94□□□□□ -1.94
PMS1-203ENST00000409593 GLYATL1Q969I3 302 aa2.94□□□□□ -1.94
PMS1-203ENST00000409593 BIRC7Q96CA5 298 aa2.94□□□□□ -1.94
PMS1-203ENST00000409593 EPSTI1Q96J88 318 aa2.94□□□□□ -1.94
PMS1-203ENST00000409593 COG3Q96JB2 828 aa2.94□□□□□ -1.94
PMS1-203ENST00000409593 PAXXQ9BUH6 204 aa2.94□□□□□ -1.94
PMS1-203ENST00000409593 ST6GALNAC5Q9BVH7 336 aa2.94□□□□□ -1.94
PMS1-203ENST00000409593 CNIH4Q9P003 139 aa2.94□□□□□ -1.94
PMS1-203ENST00000409593 CLIP2Q9UDT6 1046 aa2.94□□□□□ -1.94
PMS1-203ENST00000409593 PRO0461Q9UI25 63 aa2.94□□□□□ -1.94
PMS1-203ENST00000409593 FAM205AQ6ZU69 1335 aa2.94□□□□□ -1.94
PMS1-203ENST00000409593 A0A0U1RQK1 487 aa2.93□□□□□ -1.94
PMS1-203ENST00000409593 ZNF320A2RRD8 509 aa2.93□□□□□ -1.94
PMS1-203ENST00000409593 E7ENQ6 273 aa2.93□□□□□ -1.94
PMS1-203ENST00000409593 H0Y626 953 aa2.93□□□□□ -1.94
PMS1-203ENST00000409593 GOT2P00505 430 aaKnown RBP2.93□□□□□ -1.94
PMS1-203ENST00000409593 UCP1P25874 307 aa2.93□□□□□ -1.94
PMS1-203ENST00000409593 STIP1P31948 543 aaKnown RBP2.93□□□□□ -1.94
PMS1-203ENST00000409593 RGRP47804 291 aa2.93□□□□□ -1.94
PMS1-203ENST00000409593 NDST1P52848 882 aa2.93□□□□□ -1.94
PMS1-203ENST00000409593 GEMP55040 296 aa2.93□□□□□ -1.94
PMS1-203ENST00000409593 STX1AQ16623 288 aa2.93□□□□□ -1.94
PMS1-203ENST00000409593 MICAQ29983 383 aa2.93□□□□□ -1.94
PMS1-203ENST00000409593 MPPE1Q53F39 396 aa2.93□□□□□ -1.94
PMS1-203ENST00000409593 PRAMEF8Q5VWM4 474 aa2.93□□□□□ -1.94
PMS1-203ENST00000409593 MOB2Q70IA6 237 aa2.93□□□□□ -1.94
PMS1-203ENST00000409593 KCTD9Q7L273 389 aa2.93□□□□□ -1.94
PMS1-203ENST00000409593 JAKMIP1Q96N16 626 aaKnown RBP2.93□□□□□ -1.94
PMS1-203ENST00000409593 LINC00167Q96N53 147 aa2.93□□□□□ -1.94
PMS1-203ENST00000409593 SPAG8Q99932 426 aaPredicted RBP2.93□□□□□ -1.94
PMS1-203ENST00000409593 FUNDC2Q9BWH2 189 aa2.93□□□□□ -1.94
PMS1-203ENST00000409593 SLC26A1Q9H2B4 701 aa2.93□□□□□ -1.94
PMS1-203ENST00000409593 CIDEBQ9UHD4 219 aa2.93□□□□□ -1.94
PMS1-203ENST00000409593 AFF2P51816 1311 aa2.93□□□□□ -1.94
PMS1-203ENST00000409593 NOTCH2Q04721 2471 aa2.93□□□□□ -1.94
PMS1-203ENST00000409593 YJEFN3A6XGL0 299 aa2.92□□□□□ -1.94
PMS1-203ENST00000409593 H0Y9J4 135 aa2.92□□□□□ -1.94
PMS1-203ENST00000409593 GPAA1O43292 621 aa2.92□□□□□ -1.94
PMS1-203ENST00000409593 TSPAN2O60636 221 aa2.92□□□□□ -1.94
PMS1-203ENST00000409593 NUDT14O95848 222 aa2.92□□□□□ -1.94
PMS1-203ENST00000409593 SNRPCP09234 159 aaKnown RBP2.92□□□□□ -1.94
PMS1-203ENST00000409593 SLC35E2P0CK97 266 aa2.92□□□□□ -1.94
PMS1-203ENST00000409593 SERPINH1P50454 418 aaKnown RBP2.92□□□□□ -1.94
PMS1-203ENST00000409593 PRKCEQ02156 737 aa2.92□□□□□ -1.94
PMS1-203ENST00000409593 KRT31Q15323 416 aa2.92□□□□□ -1.94
PMS1-203ENST00000409593 STXBP2Q15833 593 aa2.92□□□□□ -1.94
PMS1-203ENST00000409593 GCNT7Q6ZNI0 430 aa2.92□□□□□ -1.94
PMS1-203ENST00000409593 LINC00518Q8N0U6 118 aa2.92□□□□□ -1.94
PMS1-203ENST00000409593 FIBINQ8TAL6 211 aa2.92□□□□□ -1.94
PMS1-203ENST00000409593 PIWIL1Q96J94 861 aaKnown RBP2.92□□□□□ -1.94
PMS1-203ENST00000409593 PRAM1Q96QH2 718 aa2.92□□□□□ -1.94
PMS1-203ENST00000409593 CCT8L2Q96SF2 557 aa2.92□□□□□ -1.94
PMS1-203ENST00000409593 IMPAD1Q9NX62 359 aa2.92□□□□□ -1.94
PMS1-203ENST00000409593 VNN3Q9NY84 501 aa2.92□□□□□ -1.94
PMS1-203ENST00000409593 DIMT1Q9UNQ2 313 aaKnown RBP2.92□□□□□ -1.94
PMS1-203ENST00000409593 FAM220BPB1ANY3 271 aa2.92□□□□□ -1.94
PMS1-203ENST00000409593 CACNB4O00305 520 aaPredicted RBP2.92□□□□□ -1.94
PMS1-203ENST00000409593 TXNDC12O95881 172 aa2.92□□□□□ -1.94
PMS1-203ENST00000409593 FCER2P06734 321 aa2.92□□□□□ -1.94
PMS1-203ENST00000409593 UROSP10746 265 aa2.92□□□□□ -1.94
PMS1-203ENST00000409593 GLULP15104 373 aa2.92□□□□□ -1.94
PMS1-203ENST00000409593 PRKAR2BP31323 418 aa2.92□□□□□ -1.94
PMS1-203ENST00000409593 RCN2Q14257 317 aa2.92□□□□□ -1.94
PMS1-203ENST00000409593 SEL1L2Q5TEA6 688 aa2.92□□□□□ -1.94
PMS1-203ENST00000409593 TATDN1Q6P1N9 297 aa2.92□□□□□ -1.94
PMS1-203ENST00000409593 C2orf66Q6UXQ4 117 aa2.92□□□□□ -1.94
PMS1-203ENST00000409593 LUZP1Q86V48 1076 aa2.92□□□□□ -1.94
PMS1-203ENST00000409593 STHQ8IWL8 128 aa2.92□□□□□ -1.94
PMS1-203ENST00000409593 GDAP1Q8TB36 358 aa2.92□□□□□ -1.94
PMS1-203ENST00000409593 MRPL53Q96EL3 112 aaKnown RBP2.92□□□□□ -1.94
PMS1-203ENST00000409593 OR5M11Q96RB7 305 aa2.92□□□□□ -1.94
PMS1-203ENST00000409593 DCLRE1BQ9H816 532 aa2.92□□□□□ -1.94
PMS1-203ENST00000409593 DDX28Q9NUL7 540 aaKnown RBP2.92□□□□□ -1.94
PMS1-203ENST00000409593 RAI14Q9P0K7 980 aa2.92□□□□□ -1.94
PMS1-203ENST00000409593 SLC9A8Q9Y2E8 581 aa2.92□□□□□ -1.94
PMS1-203ENST00000409593 ATG4BQ9Y4P1 393 aa2.92□□□□□ -1.94
PMS1-203ENST00000409593 HDAC3O15379 428 aa2.91□□□□□ -1.94
PMS1-203ENST00000409593 CENPBP07199 599 aaPredicted RBP2.91□□□□□ -1.94
PMS1-203ENST00000409593 VCLP18206 1134 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms