RNA–Protein interactions for RNA: ENST00000409403.6

CLK1-202, Transcript of CDC like kinase 1, humanhuman

TSL 5

Gene CLK1, Length 1,664 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-202ENST00000409403 DGCR6Q14129 220 aa5.19□□□□□ -1.58
CLK1-202ENST00000409403 PON2Q15165 354 aa5.19□□□□□ -1.58
CLK1-202ENST00000409403 RPS6KA2Q15349 733 aa5.19□□□□□ -1.58
CLK1-202ENST00000409403 GRK1Q15835 563 aa5.19□□□□□ -1.58
CLK1-202ENST00000409403 CTU2Q2VPK5 515 aaKnown RBP5.19□□□□□ -1.58
CLK1-202ENST00000409403 USP39Q53GS9 565 aaKnown RBP5.19□□□□□ -1.58
CLK1-202ENST00000409403 Q5BKY6 102 aa5.19□□□□□ -1.58
CLK1-202ENST00000409403 MPP7Q5T2T1 576 aa5.19□□□□□ -1.58
CLK1-202ENST00000409403 NXNL2Q5VZ03 156 aa5.19□□□□□ -1.58
CLK1-202ENST00000409403 GLYATQ6IB77 296 aa5.19□□□□□ -1.58
CLK1-202ENST00000409403 JADE1Q6IE81 842 aa5.19□□□□□ -1.58
CLK1-202ENST00000409403 CAPN13Q6MZZ7 669 aaPredicted RBP5.19□□□□□ -1.58
CLK1-202ENST00000409403 PLET1Q6UQ28 207 aa5.19□□□□□ -1.58
CLK1-202ENST00000409403 TMPRSS11AQ6ZMR5 421 aa5.19□□□□□ -1.58
CLK1-202ENST00000409403 CMC1Q7Z7K0 106 aa5.19□□□□□ -1.58
CLK1-202ENST00000409403 PIGZQ86VD9 579 aa5.19□□□□□ -1.58
CLK1-202ENST00000409403 TRIM69Q86WT6 500 aa5.19□□□□□ -1.58
CLK1-202ENST00000409403 RNF130Q86XS8 419 aa5.19□□□□□ -1.58
CLK1-202ENST00000409403 PHC2Q8IXK0 858 aa5.19□□□□□ -1.58
CLK1-202ENST00000409403 TIGD4Q8IY51 512 aa5.19□□□□□ -1.58
CLK1-202ENST00000409403 OR8H3Q8N146 312 aa5.19□□□□□ -1.58
CLK1-202ENST00000409403 CCNYL1Q8N7R7 359 aa5.19□□□□□ -1.58
CLK1-202ENST00000409403 YIPF7Q8N8F6 280 aa5.19□□□□□ -1.58
CLK1-202ENST00000409403 ZNF540Q8NDQ6 660 aa5.19□□□□□ -1.58
CLK1-202ENST00000409403 OR52E4Q8NGH9 312 aa5.19□□□□□ -1.58
CLK1-202ENST00000409403 OR8K3Q8NH51 312 aa5.19□□□□□ -1.58
CLK1-202ENST00000409403 C9orf43Q8TAL5 461 aaPredicted RBP5.19□□□□□ -1.58
CLK1-202ENST00000409403 ITFG1Q8TB96 612 aa5.19□□□□□ -1.58
CLK1-202ENST00000409403 SLC25A43Q8WUT9 341 aaPredicted RBP5.19□□□□□ -1.58
CLK1-202ENST00000409403 TMEM171Q8WVE6 324 aa5.19□□□□□ -1.58
CLK1-202ENST00000409403 EXTL1Q92935 676 aa5.19□□□□□ -1.58
CLK1-202ENST00000409403 DVL3Q92997 716 aaPredicted RBP5.19□□□□□ -1.58
CLK1-202ENST00000409403 C18orf25Q96B23 403 aaPredicted RBP5.19□□□□□ -1.58
CLK1-202ENST00000409403 MYEOVQ96EZ4 313 aa5.19□□□□□ -1.58
CLK1-202ENST00000409403 ZC3HAV1LQ96H79 300 aaKnown RBP5.19□□□□□ -1.58
CLK1-202ENST00000409403 RADILQ96JH8 1075 aa5.19□□□□□ -1.58
CLK1-202ENST00000409403 GPR137Q96N19 417 aa5.19□□□□□ -1.58
CLK1-202ENST00000409403 SPATA13Q96N96 652 aa5.19□□□□□ -1.58
CLK1-202ENST00000409403 CCDC115Q96NT0 180 aa5.19□□□□□ -1.58
CLK1-202ENST00000409403 TRNT1Q96Q11 434 aaKnown RBP5.19□□□□□ -1.58
CLK1-202ENST00000409403 GPR22Q99680 433 aa5.19□□□□□ -1.58
CLK1-202ENST00000409403 AMBRA1Q9C0C7 1298 aa5.19□□□□□ -1.58
CLK1-202ENST00000409403 RACGAP1Q9H0H5 632 aa5.19□□□□□ -1.58
CLK1-202ENST00000409403 MFSD1Q9H3U5 465 aa5.19□□□□□ -1.58
CLK1-202ENST00000409403 RHOJQ9H4E5 214 aa5.19□□□□□ -1.58
CLK1-202ENST00000409403 MAGIXQ9H6Y5 334 aa5.19□□□□□ -1.58
CLK1-202ENST00000409403 TRIM45Q9H8W5 580 aaPredicted RBP5.19□□□□□ -1.58
CLK1-202ENST00000409403 OLA1Q9NTK5 396 aaKnown RBP5.19□□□□□ -1.58
CLK1-202ENST00000409403 MED9Q9NWA0 146 aa5.19□□□□□ -1.58
CLK1-202ENST00000409403 CMTM6Q9NX76 183 aa5.19□□□□□ -1.58
CLK1-202ENST00000409403 MAP3K20Q9NYL2 800 aaKnown RBP5.19□□□□□ -1.58
CLK1-202ENST00000409403 DNAJB11Q9UBS4 358 aa5.19□□□□□ -1.58
CLK1-202ENST00000409403 LEF1Q9UJU2 399 aaPredicted RBP5.19□□□□□ -1.58
CLK1-202ENST00000409403 SNX6Q9UNH7 406 aa5.19□□□□□ -1.58
CLK1-202ENST00000409403 KLK4Q9Y5K2 254 aa5.19□□□□□ -1.58
CLK1-202ENST00000409403 CACNG2Q9Y698 323 aa5.19□□□□□ -1.58
CLK1-202ENST00000409403 SPTA1P02549 2419 aa5.19□□□□□ -1.58
CLK1-202ENST00000409403 FREM2Q5SZK8 3169 aa5.19□□□□□ -1.58
CLK1-202ENST00000409403 ARID2Q68CP9 1835 aa5.19□□□□□ -1.58
CLK1-202ENST00000409403 PATJQ8NI35 1801 aa5.19□□□□□ -1.58
CLK1-202ENST00000409403 IGLV3-22A0A075B6J6 115 aa5.18□□□□□ -1.58
CLK1-202ENST00000409403 A0A0B4J203 849 aa5.18□□□□□ -1.58
CLK1-202ENST00000409403 A0A1B0GW55 424 aa5.18□□□□□ -1.58
CLK1-202ENST00000409403 LINC01553A4QN01 128 aa5.18□□□□□ -1.58
CLK1-202ENST00000409403 OR6C65A6NJZ3 312 aa5.18□□□□□ -1.58
CLK1-202ENST00000409403 HNRNPCL2B2RXH8 293 aa5.18□□□□□ -1.58
CLK1-202ENST00000409403 F8W036 122 aa5.18□□□□□ -1.58
CLK1-202ENST00000409403 PRMT5O14744 637 aaPredicted RBP5.18□□□□□ -1.58
CLK1-202ENST00000409403 SLC16A4O15374 487 aa5.18□□□□□ -1.58
CLK1-202ENST00000409403 SEC14L5O43304 696 aa5.18□□□□□ -1.58
CLK1-202ENST00000409403 PAPSS2O95340 614 aaPredicted RBP5.18□□□□□ -1.58
CLK1-202ENST00000409403 TNFRSF6BO95407 300 aa5.18□□□□□ -1.58
CLK1-202ENST00000409403 GLP2RO95838 553 aa5.18□□□□□ -1.58
CLK1-202ENST00000409403 FADS2O95864 444 aaKnown RBP5.18□□□□□ -1.58
CLK1-202ENST00000409403 TPOP07202 933 aa5.18□□□□□ -1.58
CLK1-202ENST00000409403 RETP07949 1114 aa5.18□□□□□ -1.58
CLK1-202ENST00000409403 HOXC6P09630 235 aa5.18□□□□□ -1.58
CLK1-202ENST00000409403 DUX4L2P0CJ85 424 aa5.18□□□□□ -1.58
CLK1-202ENST00000409403 DUX4L3P0CJ86 424 aa5.18□□□□□ -1.58
CLK1-202ENST00000409403 DUX4L4P0CJ87 422 aa5.18□□□□□ -1.58
CLK1-202ENST00000409403 DUX4L5P0CJ88 424 aa5.18□□□□□ -1.58
CLK1-202ENST00000409403 DUX4L6P0CJ89 424 aa5.18□□□□□ -1.58
CLK1-202ENST00000409403 DUX4L7P0CJ90 424 aa5.18□□□□□ -1.58
CLK1-202ENST00000409403 RRASP10301 218 aa5.18□□□□□ -1.58
CLK1-202ENST00000409403 HLA-EP13747 358 aa5.18□□□□□ -1.58
CLK1-202ENST00000409403 PDGFRAP16234 1089 aa5.18□□□□□ -1.58
CLK1-202ENST00000409403 GPD1P21695 349 aa5.18□□□□□ -1.58
CLK1-202ENST00000409403 CBLP22681 906 aa5.18□□□□□ -1.58
CLK1-202ENST00000409403 ZFP36P26651 326 aaKnown RBP5.18□□□□□ -1.58
CLK1-202ENST00000409403 CA5AP35218 305 aa5.18□□□□□ -1.58
CLK1-202ENST00000409403 TKTL1P51854 596 aa5.18□□□□□ -1.58
CLK1-202ENST00000409403 BCAT1P54687 386 aa5.18□□□□□ -1.58
CLK1-202ENST00000409403 SNX16P57768 344 aa5.18□□□□□ -1.58
CLK1-202ENST00000409403 UBE3AQ05086 875 aa5.18□□□□□ -1.58
CLK1-202ENST00000409403 SLAMF1Q13291 335 aa5.18□□□□□ -1.58
CLK1-202ENST00000409403 ZNF273Q14593 569 aa5.18□□□□□ -1.58
CLK1-202ENST00000409403 PPP1R3AQ16821 1122 aa5.18□□□□□ -1.58
CLK1-202ENST00000409403 TMEM81Q6P7N7 255 aa5.18□□□□□ -1.58
CLK1-202ENST00000409403 FIP1L1Q6UN15 594 aaKnown RBP5.18□□□□□ -1.58
CLK1-202ENST00000409403 TEX261Q6UWH6 196 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms